Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 Y_RNA.29-201ENST00000362570 113 ntBASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 RNU6-280P-201ENST00000364145 104 ntBASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 MIR23A-201ENST00000385245 73 ntBASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 RHEBP3-201ENST00000411920 351 ntBASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 AP000275.1-201ENST00000411943 390 ntBASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 HSPE1P12-201ENST00000412576 301 ntBASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 AL159169.1-201ENST00000421119 127 ntBASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 U8.22-201ENST00000459141 133 ntBASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 RN7SKP209-201ENST00000516888 304 ntBASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 SNORA31.18-201ENST00000517043 134 ntBASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 CASP1P1-201ENST00000526345 212 ntBASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 AL137100.2-201ENST00000555786 315 ntBASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 AC136601.2-201ENST00000604356 474 ntBASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 Y_RNA.772-201ENST00000606692 102 ntBASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 BX284668.6-201ENST00000606899 438 ntBASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 AC099506.2-201ENST00000623074 221 ntBASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 AP001148.1-201ENST00000624124 2359 ntBASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 MIR423-201ENST00000362201 94 ntBASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 RNA5SP399-201ENST00000364003 117 ntBASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 Y_RNA.274-201ENST00000364714 101 ntBASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 Y_RNA.581-201ENST00000391017 97 ntBASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 RNU7-170P-201ENST00000459303 61 ntBASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 snoU109.2-201ENST00000459316 135 ntBASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 AC090617.3-201ENST00000573670 475 ntBASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 MIR6500-201ENST00000622700 86 ntBASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 USP8P1-201ENST00000494673 3183 ntBASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 AC007785.2-201ENST00000598627 1916 ntBASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
FOXP3Q9BZS1 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4□□□□□ -1.77
FOXP3Q9BZS1 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
FOXP3Q9BZS1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4□□□□□ -1.77
FOXP3Q9BZS1 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
FOXP3Q9BZS1 AC008568.2-201ENST00000623862 2313 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 HSPA8P1-201ENST00000425843 1833 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4□□□□□ -1.77
FOXP3Q9BZS1 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4□□□□□ -1.77
FOXP3Q9BZS1 Y_RNA.143-201ENST00000363520 106 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 RNU6-105P-201ENST00000363909 104 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 Y_RNA.297-201ENST00000364950 91 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 RNU4-9P-201ENST00000364951 139 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4□□□□□ -1.77
FOXP3Q9BZS1 BTF3L4P2-201ENST00000392798 346 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 PTMAP2-201ENST00000397627 327 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 AL358453.1-201ENST00000422522 250 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 RPL21P40-201ENST00000428586 483 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 AL445584.1-201ENST00000431451 330 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 SNRPEP9-201ENST00000436794 238 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 Z82210.1-201ENST00000440037 231 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 AC009237.8-201ENST00000445492 379 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 RPL23AP62-201ENST00000463396 453 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 AC023141.12-201ENST00000512399 199 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 RNU6-1012P-201ENST00000516606 109 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4□□□□□ -1.77
FOXP3Q9BZS1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
FOXP3Q9BZS1 AC010186.2-204ENST00000537668 439 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 UBE2Q2P8-201ENST00000560644 102 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 AC120057.2-201ENST00000571520 271 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 BRDTP1-201ENST00000605735 677 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 AC004792.1-201ENST00000614523 137 ntBASIC4□□□□□ -1.77
FOXP3Q9BZS1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
FOXP3Q9BZS1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 Y_RNA.16-201ENST00000362421 102 ntBASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 Y_RNA.54-201ENST00000362766 105 ntBASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 RNU6-1266P-201ENST00000362794 105 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms