Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC009094.1-201ENST00000564443 426 ntBASIC2.01□□□□□ -2.09
RPAP1Q9BWH6 AC004223.4-201ENST00000612426 332 ntBASIC2.01□□□□□ -2.09
RPAP1Q9BWH6 U4atac.1-201ENST00000618345 95 ntBASIC2.01□□□□□ -2.09
RPAP1Q9BWH6 RNU6-858P-201ENST00000362436 107 ntBASIC2□□□□□ -2.09
RPAP1Q9BWH6 RNU5E-1-201ENST00000362477 120 ntBASIC2□□□□□ -2.09
RPAP1Q9BWH6 RNA5SP240-201ENST00000365355 128 ntBASIC2□□□□□ -2.09
RPAP1Q9BWH6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2□□□□□ -2.09
RPAP1Q9BWH6 MIR676-201ENST00000390702 67 ntBASIC2□□□□□ -2.09
RPAP1Q9BWH6 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2□□□□□ -2.09
RPAP1Q9BWH6 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2□□□□□ -2.09
RPAP1Q9BWH6 Y_RNA.623-201ENST00000411128 95 ntBASIC2□□□□□ -2.09
RPAP1Q9BWH6 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2□□□□□ -2.09
RPAP1Q9BWH6 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2□□□□□ -2.09
RPAP1Q9BWH6 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2□□□□□ -2.09
RPAP1Q9BWH6 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2□□□□□ -2.09
RPAP1Q9BWH6 RNU7-95P-201ENST00000459222 64 ntBASIC2□□□□□ -2.09
RPAP1Q9BWH6 RNU7-193P-201ENST00000516723 65 ntBASIC2□□□□□ -2.09
RPAP1Q9BWH6 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2□□□□□ -2.09
RPAP1Q9BWH6 ADI1P3-201ENST00000549509 470 ntBASIC2□□□□□ -2.09
RPAP1Q9BWH6 AC090616.2-202ENST00000584248 222 ntBASIC2□□□□□ -2.09
RPAP1Q9BWH6 AC112191.3-201ENST00000604371 277 ntBASIC2□□□□□ -2.09
RPAP1Q9BWH6 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2□□□□□ -2.09
RPAP1Q9BWH6 AC092656.1-203ENST00000624134 423 ntBASIC2□□□□□ -2.09
RPAP1Q9BWH6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2□□□□□ -2.09
RPAP1Q9BWH6 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RPAP1Q9BWH6 MIR412-201ENST00000362142 91 ntBASIC1.99□□□□□ -2.09
RPAP1Q9BWH6 ELOCP4-201ENST00000420090 333 ntBASIC1.99□□□□□ -2.09
RPAP1Q9BWH6 RPL31P63-201ENST00000422565 375 ntBASIC1.99□□□□□ -2.09
RPAP1Q9BWH6 AL160275.3-201ENST00000423876 471 ntBASIC1.99□□□□□ -2.09
RPAP1Q9BWH6 AL161788.1-201ENST00000441805 169 ntBASIC1.99□□□□□ -2.09
RPAP1Q9BWH6 UBE2D3P4-201ENST00000441973 436 ntBASIC1.99□□□□□ -2.09
RPAP1Q9BWH6 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.99□□□□□ -2.09
RPAP1Q9BWH6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.99□□□□□ -2.09
RPAP1Q9BWH6 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.99□□□□□ -2.09
RPAP1Q9BWH6 snoU109.2-201ENST00000459316 135 ntBASIC1.99□□□□□ -2.09
RPAP1Q9BWH6 AC005178.1-201ENST00000508392 440 ntBASIC1.99□□□□□ -2.09
RPAP1Q9BWH6 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.99□□□□□ -2.09
RPAP1Q9BWH6 ZNF321P-202ENST00000550843 495 ntBASIC1.99□□□□□ -2.09
RPAP1Q9BWH6 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.99□□□□□ -2.09
RPAP1Q9BWH6 AC096772.1-201ENST00000609146 564 ntBASIC1.99□□□□□ -2.09
RPAP1Q9BWH6 AL512598.1-201ENST00000610158 273 ntBASIC1.99□□□□□ -2.09
RPAP1Q9BWH6 U6.42-201ENST00000618440 107 ntBASIC1.99□□□□□ -2.09
RPAP1Q9BWH6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RPAP1Q9BWH6 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 Y_RNA.560-201ENST00000384689 102 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 MIR558-201ENST00000384920 94 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 RNU2-39P-201ENST00000410604 198 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AC127391.1-201ENST00000411737 98 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 Z99497.1-201ENST00000421282 135 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AL627311.1-201ENST00000431514 115 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AC245517.4-201ENST00000448601 281 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 CYP2C59P-201ENST00000457790 269 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AC117503.1-201ENST00000472241 394 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 RPL30P6-201ENST00000475925 342 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AC112206.3-201ENST00000514578 389 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 RNU6-123P-201ENST00000516163 102 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 Y_RNA.672-201ENST00000516289 104 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 RPL21P5-201ENST00000554662 472 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 PSMA3P-201ENST00000555485 635 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AC103987.3-201ENST00000582071 292 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 DEFB131E-202ENST00000602581 683 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 WISP1-OT1-201ENST00000602893 642 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AL022161.1-201ENST00000604390 213 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AC018638.7-201ENST00000605836 1114 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AC012409.4-201ENST00000612923 249 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 SDR42E1P4-201ENST00000620894 481 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AC131159.1-201ENST00000621854 213 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AP003400.5-201ENST00000624827 617 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AC099654.13-201ENST00000639774 207 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 SNORD3E-201ENST00000362899 217 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 RNU6-942P-201ENST00000363002 107 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 SNORD114-19-201ENST00000363072 75 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 SNORA24.1-201ENST00000384401 135 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 RNU1-57P-201ENST00000384491 166 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 MIR489-201ENST00000384923 84 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 CISD1P1-201ENST00000393907 327 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 RPL23AP32-201ENST00000395315 459 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AIMP1P2-201ENST00000425294 312 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 RPS24P1-201ENST00000438550 371 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 KATNBL1P6-201ENST00000453433 915 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 RNU7-125P-201ENST00000458760 62 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 RN7SKP287-201ENST00000516546 266 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AC090897.2-201ENST00000581715 130 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AL713866.2-201ENST00000603579 219 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AC093424.1-201ENST00000604999 338 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 AL139286.2-201ENST00000606838 396 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms