Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SNORA20B-201ENST00000384220 132 ntBASIC4.66□□□□□ -1.66
USB1Q9BQ65 SNORA1.3-201ENST00000384676 136 ntBASIC4.66□□□□□ -1.66
USB1Q9BQ65 U8.12-201ENST00000384701 133 ntBASIC4.66□□□□□ -1.66
USB1Q9BQ65 MIR105-1-201ENST00000385222 81 ntBASIC4.66□□□□□ -1.66
USB1Q9BQ65 MIR765-201ENST00000390226 114 ntBASIC4.66□□□□□ -1.66
USB1Q9BQ65 U3.36-201ENST00000408418 213 ntBASIC4.66□□□□□ -1.66
USB1Q9BQ65 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.66□□□□□ -1.66
USB1Q9BQ65 AL161651.1-201ENST00000440882 223 ntBASIC4.66□□□□□ -1.66
USB1Q9BQ65 RN7SL610P-201ENST00000463845 291 ntBASIC4.66□□□□□ -1.66
USB1Q9BQ65 SRIP1-201ENST00000489235 288 ntBASIC4.66□□□□□ -1.66
USB1Q9BQ65 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.66□□□□□ -1.66
USB1Q9BQ65 RPL10P14-201ENST00000565265 298 ntBASIC4.66□□□□□ -1.66
USB1Q9BQ65 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.66□□□□□ -1.66
USB1Q9BQ65 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.66□□□□□ -1.66
USB1Q9BQ65 RPSAP73-201ENST00000614820 330 ntBASIC4.66□□□□□ -1.66
USB1Q9BQ65 AC068870.2-201ENST00000620635 389 ntBASIC4.66□□□□□ -1.66
USB1Q9BQ65 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.66□□□□□ -1.66
USB1Q9BQ65 AL513302.2-201ENST00000562313 1842 ntBASIC4.66□□□□□ -1.66
USB1Q9BQ65 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.66□□□□□ -1.66
USB1Q9BQ65 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
USB1Q9BQ65 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.66□□□□□ -1.66
USB1Q9BQ65 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
USB1Q9BQ65 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.66□□□□□ -1.66
USB1Q9BQ65 AC104623.2-202ENST00000623477 4002 ntBASIC4.66□□□□□ -1.66
USB1Q9BQ65 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.66□□□□□ -1.66
USB1Q9BQ65 MAPK10-263ENST00000641052 4307 ntBASIC4.65□□□□□ -1.66
USB1Q9BQ65 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
USB1Q9BQ65 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
USB1Q9BQ65 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.65□□□□□ -1.66
USB1Q9BQ65 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
USB1Q9BQ65 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
USB1Q9BQ65 RNU6-529P-201ENST00000363383 104 ntBASIC4.65□□□□□ -1.67
USB1Q9BQ65 Y_RNA.369-201ENST00000365568 117 ntBASIC4.65□□□□□ -1.67
USB1Q9BQ65 RNU6-32P-201ENST00000383948 107 ntBASIC4.65□□□□□ -1.67
USB1Q9BQ65 RNU6-13P-201ENST00000384248 107 ntBASIC4.65□□□□□ -1.67
USB1Q9BQ65 SNORA16A-201ENST00000384342 137 ntBASIC4.65□□□□□ -1.67
USB1Q9BQ65 RNU6-171P-201ENST00000384354 107 ntBASIC4.65□□□□□ -1.67
USB1Q9BQ65 RNU6-12P-201ENST00000384604 107 ntBASIC4.65□□□□□ -1.67
USB1Q9BQ65 RNU6-41P-201ENST00000384741 107 ntBASIC4.65□□□□□ -1.67
USB1Q9BQ65 AC107626.1-201ENST00000471084 183 ntBASIC4.65□□□□□ -1.67
USB1Q9BQ65 RN7SL222P-201ENST00000476452 299 ntBASIC4.65□□□□□ -1.67
USB1Q9BQ65 RN7SKP260-201ENST00000516907 149 ntBASIC4.65□□□□□ -1.67
USB1Q9BQ65 AC044860.2-201ENST00000561005 179 ntBASIC4.65□□□□□ -1.67
USB1Q9BQ65 RN7SL52P-201ENST00000584271 284 ntBASIC4.65□□□□□ -1.67
USB1Q9BQ65 RN7SL435P-201ENST00000584418 282 ntBASIC4.65□□□□□ -1.67
USB1Q9BQ65 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.65□□□□□ -1.67
USB1Q9BQ65 AL121890.5-201ENST00000620848 304 ntBASIC4.65□□□□□ -1.67
USB1Q9BQ65 MIR6730-201ENST00000622213 67 ntBASIC4.65□□□□□ -1.67
USB1Q9BQ65 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
USB1Q9BQ65 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
USB1Q9BQ65 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
USB1Q9BQ65 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USB1Q9BQ65 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USB1Q9BQ65 RNU4-15P-201ENST00000362613 141 ntBASIC4.64□□□□□ -1.67
USB1Q9BQ65 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.64□□□□□ -1.67
USB1Q9BQ65 RNU1-43P-201ENST00000365052 165 ntBASIC4.64□□□□□ -1.67
USB1Q9BQ65 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USB1Q9BQ65 SNORA67.2-201ENST00000384300 149 ntBASIC4.64□□□□□ -1.67
USB1Q9BQ65 MIR518C-201ENST00000384822 101 ntBASIC4.64□□□□□ -1.67
USB1Q9BQ65 AL133475.1-201ENST00000404414 305 ntBASIC4.64□□□□□ -1.67
USB1Q9BQ65 MIR1278-201ENST00000408753 81 ntBASIC4.64□□□□□ -1.67
USB1Q9BQ65 MLLT10P1-201ENST00000418346 262 ntBASIC4.64□□□□□ -1.67
USB1Q9BQ65 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.64□□□□□ -1.67
USB1Q9BQ65 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.64□□□□□ -1.67
USB1Q9BQ65 AL353748.1-201ENST00000440753 474 ntBASIC4.64□□□□□ -1.67
USB1Q9BQ65 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.64□□□□□ -1.67
USB1Q9BQ65 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.64□□□□□ -1.67
USB1Q9BQ65 RN7SL97P-201ENST00000486780 299 ntBASIC4.64□□□□□ -1.67
USB1Q9BQ65 RPL31P61-201ENST00000496160 376 ntBASIC4.64□□□□□ -1.67
USB1Q9BQ65 AC134698.5-201ENST00000519444 336 ntBASIC4.64□□□□□ -1.67
USB1Q9BQ65 AP004607.2-201ENST00000533949 322 ntBASIC4.64□□□□□ -1.67
USB1Q9BQ65 AC039056.2-201ENST00000622261 511 ntBASIC4.64□□□□□ -1.67
USB1Q9BQ65 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.64□□□□□ -1.67
USB1Q9BQ65 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USB1Q9BQ65 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USB1Q9BQ65 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.64□□□□□ -1.67
USB1Q9BQ65 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.64□□□□□ -1.67
USB1Q9BQ65 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.64□□□□□ -1.67
USB1Q9BQ65 AC068254.2-201ENST00000623938 3577 ntBASIC4.64□□□□□ -1.67
USB1Q9BQ65 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USB1Q9BQ65 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
USB1Q9BQ65 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.63□□□□□ -1.67
USB1Q9BQ65 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
USB1Q9BQ65 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.63□□□□□ -1.67
USB1Q9BQ65 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
USB1Q9BQ65 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
USB1Q9BQ65 RN7SKP104-201ENST00000362605 328 ntBASIC4.63□□□□□ -1.67
USB1Q9BQ65 MIR548B-201ENST00000385247 97 ntBASIC4.63□□□□□ -1.67
USB1Q9BQ65 AL645927.1-201ENST00000396783 406 ntBASIC4.63□□□□□ -1.67
USB1Q9BQ65 MIR1302-4-201ENST00000408701 150 ntBASIC4.63□□□□□ -1.67
USB1Q9BQ65 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.63□□□□□ -1.67
USB1Q9BQ65 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.63□□□□□ -1.67
USB1Q9BQ65 AC084357.1-201ENST00000473404 255 ntBASIC4.63□□□□□ -1.67
USB1Q9BQ65 RPS29P24-201ENST00000486345 171 ntBASIC4.63□□□□□ -1.67
USB1Q9BQ65 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.63□□□□□ -1.67
USB1Q9BQ65 SCARNA20.4-201ENST00000516969 131 ntBASIC4.63□□□□□ -1.67
USB1Q9BQ65 AC092490.3-201ENST00000545370 572 ntBASIC4.63□□□□□ -1.67
USB1Q9BQ65 RN7SL176P-201ENST00000580352 264 ntBASIC4.63□□□□□ -1.67
USB1Q9BQ65 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.63□□□□□ -1.67
USB1Q9BQ65 AC244107.2-201ENST00000611773 76 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms