Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.21□□□□□ -1.9
TIMP4Q99727 Y_RNA.447-201ENST00000384184 113 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 RNU6-700P-201ENST00000391043 107 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TIMP4Q99727 AC017079.2-201ENST00000416102 485 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 DBIP2-201ENST00000419076 262 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 NDUFB4P7-201ENST00000423198 363 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.21□□□□□ -1.9
TIMP4Q99727 AL627311.1-201ENST00000431514 115 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.21□□□□□ -1.9
TIMP4Q99727 RBMY2UP-201ENST00000453474 324 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
TIMP4Q99727 AC021205.2-201ENST00000480069 347 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 RPL21P13-201ENST00000488305 481 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 RNU6-1143P-201ENST00000516125 104 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 SNORA70.16-201ENST00000516390 95 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 RNU6-572P-201ENST00000516724 80 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 RNU6-579P-201ENST00000516879 102 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 SNORA31.19-201ENST00000517079 126 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.21□□□□□ -1.9
TIMP4Q99727 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.21□□□□□ -1.9
TIMP4Q99727 AC026333.2-201ENST00000542164 106 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 AC007458.1-201ENST00000542812 373 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.21□□□□□ -1.9
TIMP4Q99727 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.21□□□□□ -1.9
TIMP4Q99727 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.21□□□□□ -1.9
TIMP4Q99727 VN1R91P-201ENST00000594377 169 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 MIR7975-201ENST00000619350 68 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 AP003355.3-201ENST00000623465 114 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TIMP4Q99727 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TIMP4Q99727 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TIMP4Q99727 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TIMP4Q99727 ZNF299P-201ENST00000406845 1804 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TIMP4Q99727 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
TIMP4Q99727 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.2□□□□□ -1.9
TIMP4Q99727 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TIMP4Q99727 RNU6-600P-201ENST00000362524 99 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 RNA5SP387-201ENST00000364226 106 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 Y_RNA.489-201ENST00000384410 101 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 MIR490-201ENST00000384865 128 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 MIR628-201ENST00000385229 95 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.2□□□□□ -1.9
TIMP4Q99727 MIR1302-6-201ENST00000408466 90 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 U3.39-201ENST00000408569 239 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 MIR1290-201ENST00000408735 78 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 AC009310.1-201ENST00000414414 451 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 AC007098.1-201ENST00000420122 367 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.2□□□□□ -1.9
TIMP4Q99727 AP000907.1-201ENST00000428428 510 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
TIMP4Q99727 NDUFB1P2-201ENST00000449477 176 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.2□□□□□ -1.9
TIMP4Q99727 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.2□□□□□ -1.9
TIMP4Q99727 MIR2276-201ENST00000516886 89 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 RNA5SP291-201ENST00000517222 105 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 HSPE1P20-201ENST00000538133 289 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.2□□□□□ -1.9
TIMP4Q99727 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.2□□□□□ -1.9
TIMP4Q99727 RPS29P30-201ENST00000600975 111 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 AC012468.1-201ENST00000604888 430 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 RAC1P9-201ENST00000604990 392 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 AC004805.2-201ENST00000605382 482 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.2□□□□□ -1.9
TIMP4Q99727 AC078938.1-201ENST00000620993 318 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 AC090617.7-201ENST00000623952 126 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.2□□□□□ -1.9
TIMP4Q99727 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TIMP4Q99727 AC233263.6-201ENST00000631132 1963 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 AL049781.1-201ENST00000623195 3585 ntBASIC3.2□□□□□ -1.9
TIMP4Q99727 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TIMP4Q99727 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.19□□□□□ -1.9
TIMP4Q99727 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TIMP4Q99727 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TIMP4Q99727 AC116096.1-201ENST00000566804 2314 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TIMP4Q99727 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.19□□□□□ -1.9
TIMP4Q99727 RNU6-472P-201ENST00000384299 107 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 Y_RNA.551-201ENST00000384661 102 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 MIR34A-201ENST00000385130 110 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 MT-TW-201ENST00000387382 68 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 SNORA69.1-201ENST00000390904 137 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.19□□□□□ -1.9
TIMP4Q99727 RNU2-33P-201ENST00000410344 192 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 RNA5SP494-201ENST00000410653 129 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 RNU2-68P-201ENST00000410878 191 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.19□□□□□ -1.9
TIMP4Q99727 AL356968.1-201ENST00000416622 474 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 AL117339.3-201ENST00000418733 162 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 BX679664.1-201ENST00000434429 253 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.19□□□□□ -1.9
TIMP4Q99727 AC073910.1-201ENST00000445047 438 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 RPS4XP2-201ENST00000458402 793 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 AC092798.1-201ENST00000458542 409 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 RNU7-170P-201ENST00000459303 61 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 AC093852.1-201ENST00000503587 266 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 AC074250.1-201ENST00000511117 192 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 SNORA25.11-201ENST00000515935 105 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 SNORA40.15-201ENST00000516884 107 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms