Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL12A1Q99715 HMSD-204ENST00000526932 162 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL12A1Q99715 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC-0.06□□□□□ -2.42
COL12A1Q99715 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL12A1Q99715 MIR4431-201ENST00000579990 94 ntBASIC-0.06□□□□□ -2.42
COL12A1Q99715 MIR4765-201ENST00000585007 77 ntBASIC-0.06□□□□□ -2.42
COL12A1Q99715 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL12A1Q99715 AC097065.2-201ENST00000608159 533 ntBASIC-0.06□□□□□ -2.42
COL12A1Q99715 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC-0.06□□□□□ -2.42
COL12A1Q99715 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
COL12A1Q99715 SNORD33-201ENST00000362761 85 ntBASIC-0.07□□□□□ -2.42
COL12A1Q99715 RNU6-1237P-201ENST00000384777 107 ntBASIC-0.07□□□□□ -2.42
COL12A1Q99715 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
COL12A1Q99715 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC-0.07□□□□□ -2.42
COL12A1Q99715 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC-0.07□□□□□ -2.42
COL12A1Q99715 AC112492.4-201ENST00000456549 352 ntBASIC-0.07□□□□□ -2.42
COL12A1Q99715 RNU7-27P-201ENST00000459281 62 ntBASIC-0.07□□□□□ -2.42
COL12A1Q99715 RPL30P7-201ENST00000479312 323 ntBASIC-0.07□□□□□ -2.42
COL12A1Q99715 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC-0.07□□□□□ -2.42
COL12A1Q99715 AC134026.1-201ENST00000623249 2239 ntBASIC-0.07□□□□□ -2.42
COL12A1Q99715 RNA5SP240-201ENST00000365355 128 ntBASIC-0.07□□□□□ -2.42
COL12A1Q99715 RNU2-36P-201ENST00000410361 191 ntBASIC-0.07□□□□□ -2.42
COL12A1Q99715 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.07□□□□□ -2.42
COL12A1Q99715 FGF7P5-201ENST00000441829 291 ntBASIC-0.07□□□□□ -2.42
COL12A1Q99715 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC-0.07□□□□□ -2.42
COL12A1Q99715 AC040926.1-201ENST00000530195 238 ntBASIC-0.07□□□□□ -2.42
COL12A1Q99715 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC-0.07□□□□□ -2.42
COL12A1Q99715 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC-0.07□□□□□ -2.42
COL12A1Q99715 CYP3A52P-201ENST00000563326 91 ntBASIC-0.07□□□□□ -2.42
COL12A1Q99715 MIR4290-201ENST00000583807 95 ntBASIC-0.07□□□□□ -2.42
COL12A1Q99715 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.07□□□□□ -2.42
COL12A1Q99715 MTCYBP22-201ENST00000603788 447 ntBASIC-0.07□□□□□ -2.42
COL12A1Q99715 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.07□□□□□ -2.42
COL12A1Q99715 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC-0.07□□□□□ -2.42
COL12A1Q99715 MIR196A2-201ENST00000385189 110 ntBASIC-0.07□□□□□ -2.42
COL12A1Q99715 AC098592.2-201ENST00000413158 265 ntBASIC-0.07□□□□□ -2.42
COL12A1Q99715 CETN4P-201ENST00000432407 469 ntBASIC-0.07□□□□□ -2.42
COL12A1Q99715 AC245102.2-201ENST00000448956 180 ntBASIC-0.07□□□□□ -2.42
COL12A1Q99715 MIR1246-201ENST00000636535 73 ntBASIC-0.07□□□□□ -2.42
COL12A1Q99715 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.07□□□□□ -2.42
COL12A1Q99715 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.08□□□□□ -2.42
COL12A1Q99715 GAPDHP17-201ENST00000449858 1001 ntBASIC-0.08□□□□□ -2.42
COL12A1Q99715 NRON-201ENST00000517270 370 ntBASIC-0.08□□□□□ -2.42
COL12A1Q99715 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC-0.08□□□□□ -2.42
COL12A1Q99715 AC109810.1-201ENST00000534066 224 ntBASIC-0.08□□□□□ -2.42
COL12A1Q99715 AP000943.4-201ENST00000622912 357 ntBASIC-0.08□□□□□ -2.42
COL12A1Q99715 MIR4315-1-201ENST00000636800 73 ntBASIC-0.08□□□□□ -2.42
COL12A1Q99715 MIR4315-2-201ENST00000640925 73 ntBASIC-0.08□□□□□ -2.42
COL12A1Q99715 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
COL12A1Q99715 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.08□□□□□ -2.42
COL12A1Q99715 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
COL12A1Q99715 RNU6-837P-201ENST00000391056 108 ntBASIC-0.08□□□□□ -2.42
COL12A1Q99715 RNA5SP496-201ENST00000391240 109 ntBASIC-0.08□□□□□ -2.42
COL12A1Q99715 RPS15AP40-201ENST00000419621 391 ntBASIC-0.08□□□□□ -2.42
COL12A1Q99715 AC104651.1-201ENST00000427559 735 ntBASIC-0.08□□□□□ -2.42
COL12A1Q99715 AC108740.1-201ENST00000498629 225 ntBASIC-0.08□□□□□ -2.42
COL12A1Q99715 SCARNA17-201ENST00000516183 144 ntBASIC-0.08□□□□□ -2.42
COL12A1Q99715 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.08□□□□□ -2.42
COL12A1Q99715 CASP1-212ENST00000531166 300 ntTSL 5 BASIC-0.08□□□□□ -2.42
COL12A1Q99715 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC-0.08□□□□□ -2.42
COL12A1Q99715 AC069304.2-201ENST00000605154 435 ntBASIC-0.08□□□□□ -2.42
COL12A1Q99715 MIR548AZ-201ENST00000616567 95 ntBASIC-0.08□□□□□ -2.42
COL12A1Q99715 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC-0.08□□□□□ -2.42
COL12A1Q99715 SNORA12.1-201ENST00000390873 148 ntBASIC-0.09□□□□□ -2.42
COL12A1Q99715 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC-0.09□□□□□ -2.42
COL12A1Q99715 AC022447.1-201ENST00000515358 464 ntBASIC-0.09□□□□□ -2.42
COL12A1Q99715 SNORA4.4-201ENST00000515921 135 ntBASIC-0.09□□□□□ -2.42
COL12A1Q99715 RNU6-732P-201ENST00000516033 103 ntBASIC-0.09□□□□□ -2.42
COL12A1Q99715 RNU6-197P-201ENST00000516680 100 ntBASIC-0.09□□□□□ -2.42
COL12A1Q99715 SNORA31.22-201ENST00000517204 135 ntBASIC-0.09□□□□□ -2.42
COL12A1Q99715 USP12-203ENST00000620323 349 ntTSL 3 BASIC-0.09□□□□□ -2.42
COL12A1Q99715 AC106858.1-201ENST00000637497 429 ntBASIC-0.09□□□□□ -2.42
COL12A1Q99715 RNA5SP327-201ENST00000362494 101 ntBASIC-0.09□□□□□ -2.42
COL12A1Q99715 NCOR1P3-201ENST00000420479 303 ntBASIC-0.09□□□□□ -2.42
COL12A1Q99715 AC132479.1-201ENST00000449160 144 ntBASIC-0.09□□□□□ -2.42
COL12A1Q99715 AC092757.1-201ENST00000467293 467 ntBASIC-0.09□□□□□ -2.42
COL12A1Q99715 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.09□□□□□ -2.42
COL12A1Q99715 RNA5SP227-201ENST00000516184 113 ntBASIC-0.09□□□□□ -2.42
COL12A1Q99715 AC092125.1-201ENST00000562568 1995 ntBASIC-0.09□□□□□ -2.42
COL12A1Q99715 MTCO2P20-201ENST00000437339 673 ntBASIC-0.1□□□□□ -2.42
COL12A1Q99715 AC114981.1-201ENST00000503897 678 ntBASIC-0.1□□□□□ -2.42
COL12A1Q99715 RNA5SP137-201ENST00000516833 135 ntBASIC-0.1□□□□□ -2.42
COL12A1Q99715 SCARNA3-201ENST00000517097 143 ntBASIC-0.1□□□□□ -2.42
COL12A1Q99715 AC008088.1-201ENST00000580993 280 ntBASIC-0.1□□□□□ -2.42
COL12A1Q99715 ZNF92P3-201ENST00000596594 954 ntBASIC-0.1□□□□□ -2.42
COL12A1Q99715 AL357312.1-201ENST00000603879 298 ntBASIC-0.1□□□□□ -2.42
COL12A1Q99715 AP003973.1-201ENST00000604639 691 ntBASIC-0.1□□□□□ -2.42
COL12A1Q99715 AC104465.1-201ENST00000611365 139 ntBASIC-0.1□□□□□ -2.42
COL12A1Q99715 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC-0.1□□□□□ -2.42
COL12A1Q99715 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.1□□□□□ -2.43
COL12A1Q99715 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
COL12A1Q99715 RPL26P27-201ENST00000414397 437 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 AL353777.1-201ENST00000425552 326 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 AC027119.1-201ENST00000440877 241 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 MTCO1P44-201ENST00000441935 243 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC-0.1□□□□□ -2.43
COL12A1Q99715 AC022493.2-201ENST00000506122 481 ntBASIC-0.1□□□□□ -2.43
COL12A1Q99715 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
COL12A1Q99715 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms