Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 Y_RNA.548-201ENST00000384656 105 ntBASIC0.64□□□□□ -2.31
CDK5RAP2Q96SN8 AL590084.2-201ENST00000401481 382 ntBASIC0.64□□□□□ -2.31
CDK5RAP2Q96SN8 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.64□□□□□ -2.31
CDK5RAP2Q96SN8 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.64□□□□□ -2.31
CDK5RAP2Q96SN8 RPL36AP53-201ENST00000432891 316 ntBASIC0.64□□□□□ -2.31
CDK5RAP2Q96SN8 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.64□□□□□ -2.31
CDK5RAP2Q96SN8 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.64□□□□□ -2.31
CDK5RAP2Q96SN8 AC134050.1-201ENST00000495088 933 ntBASIC0.64□□□□□ -2.31
CDK5RAP2Q96SN8 AK3P2-201ENST00000507976 429 ntBASIC0.64□□□□□ -2.31
CDK5RAP2Q96SN8 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
CDK5RAP2Q96SN8 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.64□□□□□ -2.31
CDK5RAP2Q96SN8 CLIC4P2-201ENST00000601934 717 ntBASIC0.64□□□□□ -2.31
CDK5RAP2Q96SN8 AC009033.1-201ENST00000624279 431 ntBASIC0.64□□□□□ -2.31
CDK5RAP2Q96SN8 ELL2P3-201ENST00000457883 1602 ntBASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 SNORD51.1-201ENST00000365405 77 ntBASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 AC138623.1-201ENST00000418060 216 ntBASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 TPTE2P1-204ENST00000435256 593 ntBASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 MTCO2P15-201ENST00000532655 656 ntBASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 LINC00557-201ENST00000563184 1279 ntBASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 AC012065.4-201ENST00000602445 679 ntBASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 AC133794.1-201ENST00000602731 914 ntBASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 AC100821.1-201ENST00000523153 2479 ntBASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 MIR597-201ENST00000384968 97 ntBASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 MTCO2P5-201ENST00000422621 426 ntBASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 UBE2V1P8-201ENST00000437166 265 ntBASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 GTF2IP13-201ENST00000438487 386 ntBASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 BRK1P2-201ENST00000442875 223 ntBASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 AL163195.1-201ENST00000496941 348 ntBASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 RNA5SP121-201ENST00000516537 101 ntBASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 RNA5SP476-201ENST00000516613 103 ntBASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 AP000763.2-201ENST00000540641 163 ntBASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 AC002400.1-201ENST00000569310 726 ntBASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 AC107952.2-201ENST00000606048 486 ntBASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
CDK5RAP2Q96SN8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CDK5RAP2Q96SN8 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.62□□□□□ -2.31
CDK5RAP2Q96SN8 VTRNA1-3-201ENST00000365645 89 ntBASIC0.62□□□□□ -2.31
CDK5RAP2Q96SN8 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.62□□□□□ -2.31
CDK5RAP2Q96SN8 AC092634.6-201ENST00000418558 192 ntBASIC0.62□□□□□ -2.31
CDK5RAP2Q96SN8 AC008267.5-201ENST00000424928 265 ntBASIC0.62□□□□□ -2.31
CDK5RAP2Q96SN8 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.62□□□□□ -2.31
CDK5RAP2Q96SN8 AC027119.1-201ENST00000440877 241 ntBASIC0.62□□□□□ -2.31
CDK5RAP2Q96SN8 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
CDK5RAP2Q96SN8 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.62□□□□□ -2.31
CDK5RAP2Q96SN8 AP002906.1-201ENST00000603405 233 ntBASIC0.62□□□□□ -2.31
CDK5RAP2Q96SN8 AC084824.4-201ENST00000620106 731 ntBASIC0.62□□□□□ -2.31
CDK5RAP2Q96SN8 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.62□□□□□ -2.31
CDK5RAP2Q96SN8 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 RNU6-1210P-201ENST00000363775 107 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 RNU1-39P-201ENST00000383897 165 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 MIR100-201ENST00000385259 80 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 RNU6-796P-201ENST00000391086 107 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 HSPE1P13-201ENST00000451143 297 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 RPL37P6-201ENST00000460682 294 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 HMGN2P9-201ENST00000476875 229 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 AC136932.1-201ENST00000574771 208 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 RNA5SP493-201ENST00000364115 91 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 RNU6-898P-201ENST00000365627 104 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 MIR19B1-201ENST00000384829 87 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 SNORA40C-201ENST00000391285 128 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 PIGPP2-201ENST00000411569 458 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 ISCA1P1-201ENST00000426679 387 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 AC020550.1-201ENST00000447385 163 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 MTND2P6-201ENST00000455337 1030 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 RPL26P26-201ENST00000480251 434 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 MTCYBP43-201ENST00000513621 740 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 AP006587.4-201ENST00000526053 529 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 AC006213.5-201ENST00000619673 288 ntBASIC0.61□□□□□ -2.31
CDK5RAP2Q96SN8 RNU6-1167P-201ENST00000363227 94 ntBASIC0.6□□□□□ -2.31
CDK5RAP2Q96SN8 OR6C5P-201ENST00000452388 923 ntBASIC0.6□□□□□ -2.31
CDK5RAP2Q96SN8 AC092001.1-201ENST00000453012 261 ntBASIC0.6□□□□□ -2.31
CDK5RAP2Q96SN8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.6□□□□□ -2.31
CDK5RAP2Q96SN8 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.6□□□□□ -2.31
CDK5RAP2Q96SN8 AC012414.2-201ENST00000559474 187 ntBASIC0.6□□□□□ -2.31
CDK5RAP2Q96SN8 SNORA77B-201ENST00000578179 125 ntBASIC0.6□□□□□ -2.31
CDK5RAP2Q96SN8 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.6□□□□□ -2.31
CDK5RAP2Q96SN8 uc_338.15-201ENST00000615470 191 ntBASIC0.6□□□□□ -2.31
CDK5RAP2Q96SN8 MIR8063-201ENST00000621930 81 ntBASIC0.6□□□□□ -2.31
CDK5RAP2Q96SN8 AC068787.1-201ENST00000623908 691 ntBASIC0.6□□□□□ -2.31
CDK5RAP2Q96SN8 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
CDK5RAP2Q96SN8 RNU6-839P-201ENST00000363347 108 ntBASIC0.59□□□□□ -2.31
CDK5RAP2Q96SN8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
CDK5RAP2Q96SN8 RNU6-1300P-201ENST00000391046 108 ntBASIC0.59□□□□□ -2.31
CDK5RAP2Q96SN8 FTH1P15-201ENST00000406984 280 ntBASIC0.59□□□□□ -2.31
CDK5RAP2Q96SN8 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.59□□□□□ -2.31
CDK5RAP2Q96SN8 snoU13.8-201ENST00000458890 104 ntBASIC0.59□□□□□ -2.31
CDK5RAP2Q96SN8 MTCYBP40-201ENST00000509390 1135 ntBASIC0.59□□□□□ -2.31
CDK5RAP2Q96SN8 MTCO3P42-201ENST00000509488 518 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms