Protein–RNA interactions for Protein: Q96SB8

SMC6, Structural maintenance of chromosomes protein 6, humanhuman

Predictions only

Length 1,091 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6Q96SB8 AC096649.2-201ENST00000416186 393 ntBASIC2.76□□□□□ -1.97
SMC6Q96SB8 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.76□□□□□ -1.97
SMC6Q96SB8 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.76□□□□□ -1.97
SMC6Q96SB8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.76□□□□□ -1.97
SMC6Q96SB8 AL121601.2-201ENST00000438019 707 ntBASIC2.76□□□□□ -1.97
SMC6Q96SB8 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.76□□□□□ -1.97
SMC6Q96SB8 AC025750.2-201ENST00000442609 450 ntBASIC2.76□□□□□ -1.97
SMC6Q96SB8 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.76□□□□□ -1.97
SMC6Q96SB8 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.76□□□□□ -1.97
SMC6Q96SB8 BTF3P15-201ENST00000455606 336 ntBASIC2.76□□□□□ -1.97
SMC6Q96SB8 AC096576.1-201ENST00000489014 359 ntBASIC2.76□□□□□ -1.97
SMC6Q96SB8 AC116353.2-201ENST00000505332 712 ntBASIC2.76□□□□□ -1.97
SMC6Q96SB8 PRDX4P1-201ENST00000507189 574 ntBASIC2.76□□□□□ -1.97
SMC6Q96SB8 AC091826.1-201ENST00000514065 313 ntBASIC2.76□□□□□ -1.97
SMC6Q96SB8 AC118273.2-201ENST00000532092 465 ntBASIC2.76□□□□□ -1.97
SMC6Q96SB8 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.76□□□□□ -1.97
SMC6Q96SB8 AL133241.1-201ENST00000556832 487 ntBASIC2.76□□□□□ -1.97
SMC6Q96SB8 AC005498.1-201ENST00000592125 465 ntBASIC2.76□□□□□ -1.97
SMC6Q96SB8 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.76□□□□□ -1.97
SMC6Q96SB8 AC011890.2-201ENST00000613393 294 ntBASIC2.76□□□□□ -1.97
SMC6Q96SB8 RMST_7.1-201ENST00000621935 268 ntBASIC2.76□□□□□ -1.97
SMC6Q96SB8 AC099654.14-201ENST00000638599 341 ntBASIC2.76□□□□□ -1.97
SMC6Q96SB8 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.75□□□□□ -1.97
SMC6Q96SB8 MIR6073-201ENST00000352083 89 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 RNU6-266P-201ENST00000364225 107 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 Y_RNA.324-201ENST00000365165 102 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 MIR34A-201ENST00000385130 110 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 EIF4E2P1-201ENST00000393781 255 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 RAP1BP3-201ENST00000407180 549 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 U3.37-201ENST00000408528 213 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 Y_RNA.615-201ENST00000410769 117 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 USP9YP20-201ENST00000419224 558 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.75□□□□□ -1.97
SMC6Q96SB8 AL161651.1-201ENST00000440882 223 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.75□□□□□ -1.97
SMC6Q96SB8 AC087884.1-201ENST00000469738 328 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 RPL31P41-201ENST00000477967 372 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.75□□□□□ -1.97
SMC6Q96SB8 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 BTF3P12-201ENST00000519620 469 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 COPS8P3-201ENST00000526024 482 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.75□□□□□ -1.97
SMC6Q96SB8 PSMA3P-201ENST00000555485 635 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 MIR4446-201ENST00000578505 67 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 AC018638.8-201ENST00000588755 281 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 AC092747.3-201ENST00000603769 301 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 AC021646.1-201ENST00000605469 484 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 AC104237.2-201ENST00000612456 443 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
SMC6Q96SB8 AC010378.1-201ENST00000619270 362 ntBASIC2.75□□□□□ -1.97
SMC6Q96SB8 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.75□□□□□ -1.97
SMC6Q96SB8 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.75□□□□□ -1.97
SMC6Q96SB8 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.75□□□□□ -1.97
SMC6Q96SB8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SMC6Q96SB8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
SMC6Q96SB8 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
SMC6Q96SB8 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
SMC6Q96SB8 RNU6-942P-201ENST00000363002 107 ntBASIC2.74□□□□□ -1.97
SMC6Q96SB8 Y_RNA.88-201ENST00000363029 99 ntBASIC2.74□□□□□ -1.97
SMC6Q96SB8 SNORA80A-201ENST00000363922 136 ntBASIC2.74□□□□□ -1.97
SMC6Q96SB8 RNU6-1280P-201ENST00000365211 107 ntBASIC2.74□□□□□ -1.97
SMC6Q96SB8 RNU1-100P-201ENST00000365255 165 ntBASIC2.74□□□□□ -1.97
SMC6Q96SB8 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.74□□□□□ -1.97
SMC6Q96SB8 Y_RNA.530-201ENST00000384587 101 ntBASIC2.74□□□□□ -1.97
SMC6Q96SB8 RNA5SP219-201ENST00000390940 113 ntBASIC2.74□□□□□ -1.97
SMC6Q96SB8 RNU6-1148P-201ENST00000410992 104 ntBASIC2.74□□□□□ -1.97
SMC6Q96SB8 AL139413.1-201ENST00000421309 217 ntBASIC2.74□□□□□ -1.97
SMC6Q96SB8 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.74□□□□□ -1.97
SMC6Q96SB8 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.74□□□□□ -1.97
SMC6Q96SB8 AC107083.1-201ENST00000439643 279 ntBASIC2.74□□□□□ -1.97
SMC6Q96SB8 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.74□□□□□ -1.97
SMC6Q96SB8 RNU6-1038P-201ENST00000516516 104 ntBASIC2.74□□□□□ -1.97
SMC6Q96SB8 RPL7P20-201ENST00000520308 745 ntBASIC2.74□□□□□ -1.97
SMC6Q96SB8 AC060766.3-201ENST00000591442 263 ntBASIC2.74□□□□□ -1.97
SMC6Q96SB8 AC002044.1-201ENST00000606707 158 ntBASIC2.74□□□□□ -1.97
SMC6Q96SB8 Z82243.1-201ENST00000609432 473 ntBASIC2.74□□□□□ -1.97
SMC6Q96SB8 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.74□□□□□ -1.97
SMC6Q96SB8 AC090617.10-201ENST00000624308 134 ntBASIC2.74□□□□□ -1.97
SMC6Q96SB8 SCARNA4-202ENST00000625402 129 ntBASIC2.74□□□□□ -1.97
SMC6Q96SB8 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
SMC6Q96SB8 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SMC6Q96SB8 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
SMC6Q96SB8 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
SMC6Q96SB8 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SMC6Q96SB8 AC135776.4-201ENST00000624300 1904 ntBASIC2.74□□□□□ -1.97
SMC6Q96SB8 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.73□□□□□ -1.97
SMC6Q96SB8 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SMC6Q96SB8 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SMC6Q96SB8 Y_RNA.72-201ENST00000362894 103 ntBASIC2.73□□□□□ -1.97
SMC6Q96SB8 Y_RNA.279-201ENST00000364763 95 ntBASIC2.73□□□□□ -1.97
SMC6Q96SB8 Y_RNA.390-201ENST00000383932 102 ntBASIC2.73□□□□□ -1.97
SMC6Q96SB8 AL356776.1-201ENST00000406574 447 ntBASIC2.73□□□□□ -1.97
SMC6Q96SB8 EEF1A1P41-201ENST00000414667 207 ntBASIC2.73□□□□□ -1.97
SMC6Q96SB8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.73□□□□□ -1.97
SMC6Q96SB8 AL513185.2-201ENST00000425543 193 ntBASIC2.73□□□□□ -1.97
SMC6Q96SB8 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.73□□□□□ -1.97
SMC6Q96SB8 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.73□□□□□ -1.97
SMC6Q96SB8 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.73□□□□□ -1.97
SMC6Q96SB8 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.73□□□□□ -1.97
SMC6Q96SB8 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms