Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 BNIP3P9-201ENST00000603714 553 ntBASIC0.82□□□□□ -2.28
LYSMD1Q96S90 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.82□□□□□ -2.28
LYSMD1Q96S90 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.82□□□□□ -2.28
LYSMD1Q96S90 RNU6-1210P-201ENST00000363775 107 ntBASIC0.81□□□□□ -2.28
LYSMD1Q96S90 Y_RNA.226-201ENST00000364337 114 ntBASIC0.81□□□□□ -2.28
LYSMD1Q96S90 RNU6-26P-201ENST00000383985 107 ntBASIC0.81□□□□□ -2.28
LYSMD1Q96S90 AL079342.2-201ENST00000403367 482 ntBASIC0.81□□□□□ -2.28
LYSMD1Q96S90 RN7SKP61-201ENST00000410642 295 ntBASIC0.81□□□□□ -2.28
LYSMD1Q96S90 RAC1P6-201ENST00000423911 575 ntBASIC0.81□□□□□ -2.28
LYSMD1Q96S90 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.81□□□□□ -2.28
LYSMD1Q96S90 UBE2V1P8-201ENST00000437166 265 ntBASIC0.81□□□□□ -2.28
LYSMD1Q96S90 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.81□□□□□ -2.28
LYSMD1Q96S90 RPL30P6-201ENST00000475925 342 ntBASIC0.81□□□□□ -2.28
LYSMD1Q96S90 RNU6-150P-201ENST00000516237 95 ntBASIC0.81□□□□□ -2.28
LYSMD1Q96S90 CBX3P8-201ENST00000532412 525 ntBASIC0.81□□□□□ -2.28
LYSMD1Q96S90 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.81□□□□□ -2.28
LYSMD1Q96S90 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.81□□□□□ -2.28
LYSMD1Q96S90 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.81□□□□□ -2.28
LYSMD1Q96S90 AC136618.2-201ENST00000575091 400 ntBASIC0.81□□□□□ -2.28
LYSMD1Q96S90 MIR4698-201ENST00000577795 80 ntBASIC0.81□□□□□ -2.28
LYSMD1Q96S90 BNIP3P30-201ENST00000601184 574 ntBASIC0.81□□□□□ -2.28
LYSMD1Q96S90 AC004987.4-201ENST00000603383 338 ntBASIC0.81□□□□□ -2.28
LYSMD1Q96S90 AC108706.1-201ENST00000611053 297 ntBASIC0.81□□□□□ -2.28
LYSMD1Q96S90 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.81□□□□□ -2.28
LYSMD1Q96S90 AP000676.3-201ENST00000623299 569 ntBASIC0.81□□□□□ -2.28
LYSMD1Q96S90 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.81□□□□□ -2.28
LYSMD1Q96S90 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
LYSMD1Q96S90 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
LYSMD1Q96S90 RNU6-487P-201ENST00000365430 104 ntBASIC0.8□□□□□ -2.28
LYSMD1Q96S90 RNU6-354P-201ENST00000383862 107 ntBASIC0.8□□□□□ -2.28
LYSMD1Q96S90 RNU6-610P-201ENST00000384264 107 ntBASIC0.8□□□□□ -2.28
LYSMD1Q96S90 CBX3P9-201ENST00000402326 552 ntBASIC0.8□□□□□ -2.28
LYSMD1Q96S90 AC068533.2-201ENST00000411872 306 ntBASIC0.8□□□□□ -2.28
LYSMD1Q96S90 AL589872.1-201ENST00000426602 288 ntBASIC0.8□□□□□ -2.28
LYSMD1Q96S90 AC004941.2-201ENST00000427009 228 ntBASIC0.8□□□□□ -2.28
LYSMD1Q96S90 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.8□□□□□ -2.28
LYSMD1Q96S90 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.8□□□□□ -2.28
LYSMD1Q96S90 MTND2P3-201ENST00000452458 470 ntBASIC0.8□□□□□ -2.28
LYSMD1Q96S90 RPL39P36-201ENST00000490784 156 ntBASIC0.8□□□□□ -2.28
LYSMD1Q96S90 RNY4P37-201ENST00000516225 96 ntBASIC0.8□□□□□ -2.28
LYSMD1Q96S90 AC019176.1-201ENST00000518519 225 ntBASIC0.8□□□□□ -2.28
LYSMD1Q96S90 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.8□□□□□ -2.28
LYSMD1Q96S90 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.8□□□□□ -2.28
LYSMD1Q96S90 FAM106DP-201ENST00000586416 501 ntBASIC0.8□□□□□ -2.28
LYSMD1Q96S90 NIFKP6-201ENST00000598115 845 ntBASIC0.8□□□□□ -2.28
LYSMD1Q96S90 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.8□□□□□ -2.28
LYSMD1Q96S90 AC004492.1-201ENST00000607036 742 ntBASIC0.8□□□□□ -2.28
LYSMD1Q96S90 AC092656.1-203ENST00000624134 423 ntBASIC0.8□□□□□ -2.28
LYSMD1Q96S90 AC245060.5-201ENST00000610778 3293 ntBASIC0.8□□□□□ -2.28
LYSMD1Q96S90 AL391516.1-201ENST00000554380 2449 ntBASIC0.79□□□□□ -2.28
LYSMD1Q96S90 RNU6-843P-201ENST00000384454 104 ntBASIC0.79□□□□□ -2.28
LYSMD1Q96S90 RNU6-1222P-201ENST00000384615 107 ntBASIC0.79□□□□□ -2.28
LYSMD1Q96S90 MIR520E-201ENST00000384867 87 ntBASIC0.79□□□□□ -2.28
LYSMD1Q96S90 SNORA40C-201ENST00000391285 128 ntBASIC0.79□□□□□ -2.28
LYSMD1Q96S90 AL603865.2-201ENST00000401679 213 ntBASIC0.79□□□□□ -2.28
LYSMD1Q96S90 UBE2V1P10-201ENST00000414685 269 ntBASIC0.79□□□□□ -2.28
LYSMD1Q96S90 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
LYSMD1Q96S90 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.79□□□□□ -2.28
LYSMD1Q96S90 AC005094.1-201ENST00000440420 368 ntBASIC0.79□□□□□ -2.28
LYSMD1Q96S90 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.79□□□□□ -2.28
LYSMD1Q96S90 MTND2P4-201ENST00000445034 1004 ntBASIC0.79□□□□□ -2.28
LYSMD1Q96S90 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.79□□□□□ -2.28
LYSMD1Q96S90 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.79□□□□□ -2.28
LYSMD1Q96S90 UBL5P1-201ENST00000507979 193 ntBASIC0.79□□□□□ -2.28
LYSMD1Q96S90 AC108078.1-201ENST00000508073 725 ntBASIC0.79□□□□□ -2.28
LYSMD1Q96S90 AC024589.1-201ENST00000512207 263 ntBASIC0.79□□□□□ -2.28
LYSMD1Q96S90 CENPUP1-201ENST00000526649 1202 ntBASIC0.79□□□□□ -2.28
LYSMD1Q96S90 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.79□□□□□ -2.28
LYSMD1Q96S90 BNIP3P8-201ENST00000597863 560 ntBASIC0.79□□□□□ -2.28
LYSMD1Q96S90 AC112220.2-201ENST00000605513 533 ntBASIC0.79□□□□□ -2.28
LYSMD1Q96S90 AC069545.1-201ENST00000605671 358 ntBASIC0.79□□□□□ -2.28
LYSMD1Q96S90 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.79□□□□□ -2.28
LYSMD1Q96S90 AL590240.4-201ENST00000616908 390 ntBASIC0.79□□□□□ -2.28
LYSMD1Q96S90 AC012676.2-201ENST00000619258 186 ntBASIC0.79□□□□□ -2.28
LYSMD1Q96S90 AC112204.3-201ENST00000623822 332 ntBASIC0.79□□□□□ -2.28
LYSMD1Q96S90 AP003485.1-201ENST00000625093 753 ntBASIC0.79□□□□□ -2.28
LYSMD1Q96S90 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
LYSMD1Q96S90 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
LYSMD1Q96S90 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.78□□□□□ -2.28
LYSMD1Q96S90 RNU6-289P-201ENST00000364093 107 ntBASIC0.78□□□□□ -2.28
LYSMD1Q96S90 Y_RNA.408-201ENST00000383987 102 ntBASIC0.78□□□□□ -2.28
LYSMD1Q96S90 SNORA29-201ENST00000384183 140 ntBASIC0.78□□□□□ -2.28
LYSMD1Q96S90 MIR1287-201ENST00000408492 90 ntBASIC0.78□□□□□ -2.28
LYSMD1Q96S90 RNA5SP247-201ENST00000411181 105 ntBASIC0.78□□□□□ -2.28
LYSMD1Q96S90 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.78□□□□□ -2.28
LYSMD1Q96S90 EIF1P1-201ENST00000421436 341 ntBASIC0.78□□□□□ -2.28
LYSMD1Q96S90 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.78□□□□□ -2.28
LYSMD1Q96S90 FTH1P12-201ENST00000432137 551 ntBASIC0.78□□□□□ -2.28
LYSMD1Q96S90 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.78□□□□□ -2.28
LYSMD1Q96S90 PGBD4P5-201ENST00000445958 426 ntBASIC0.78□□□□□ -2.28
LYSMD1Q96S90 AC108059.3-201ENST00000456388 214 ntBASIC0.78□□□□□ -2.28
LYSMD1Q96S90 RNU7-59P-201ENST00000459101 61 ntBASIC0.78□□□□□ -2.28
LYSMD1Q96S90 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.78□□□□□ -2.28
LYSMD1Q96S90 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.78□□□□□ -2.28
LYSMD1Q96S90 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.78□□□□□ -2.28
LYSMD1Q96S90 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
LYSMD1Q96S90 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.78□□□□□ -2.28
LYSMD1Q96S90 CYP3A52P-201ENST00000563326 91 ntBASIC0.78□□□□□ -2.28
LYSMD1Q96S90 AC104072.1-201ENST00000568817 668 ntBASIC0.78□□□□□ -2.28
LYSMD1Q96S90 AP005136.1-201ENST00000579765 429 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms