Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.55□□□□□ -2.32
IFT140Q96RY7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
IFT140Q96RY7 HSPE1P13-201ENST00000451143 297 ntBASIC0.55□□□□□ -2.32
IFT140Q96RY7 AC092001.1-201ENST00000453012 261 ntBASIC0.55□□□□□ -2.32
IFT140Q96RY7 MTND3P4-201ENST00000453537 303 ntBASIC0.55□□□□□ -2.32
IFT140Q96RY7 SCARNA16.2-201ENST00000516520 172 ntBASIC0.55□□□□□ -2.32
IFT140Q96RY7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.55□□□□□ -2.32
IFT140Q96RY7 CYP3A52P-201ENST00000563326 91 ntBASIC0.55□□□□□ -2.32
IFT140Q96RY7 AC023824.3-201ENST00000569003 562 ntBASIC0.55□□□□□ -2.32
IFT140Q96RY7 MIR3937-201ENST00000580135 106 ntBASIC0.55□□□□□ -2.32
IFT140Q96RY7 BNIP3P24-201ENST00000593398 557 ntBASIC0.55□□□□□ -2.32
IFT140Q96RY7 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.55□□□□□ -2.32
IFT140Q96RY7 AL355598.1-201ENST00000604169 202 ntBASIC0.55□□□□□ -2.32
IFT140Q96RY7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.55□□□□□ -2.32
IFT140Q96RY7 MIR8065-201ENST00000620577 100 ntBASIC0.55□□□□□ -2.32
IFT140Q96RY7 MTND4P16-201ENST00000466108 1367 ntBASIC0.55□□□□□ -2.32
IFT140Q96RY7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.55□□□□□ -2.32
IFT140Q96RY7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
IFT140Q96RY7 MIR302D-201ENST00000362275 68 ntBASIC0.54□□□□□ -2.32
IFT140Q96RY7 SNORD33-201ENST00000362761 85 ntBASIC0.54□□□□□ -2.32
IFT140Q96RY7 AC007435.1-201ENST00000421086 415 ntBASIC0.54□□□□□ -2.32
IFT140Q96RY7 AC139712.2-201ENST00000424302 339 ntBASIC0.54□□□□□ -2.32
IFT140Q96RY7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.54□□□□□ -2.32
IFT140Q96RY7 MTND1P28-201ENST00000435623 950 ntBASIC0.54□□□□□ -2.32
IFT140Q96RY7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.54□□□□□ -2.32
IFT140Q96RY7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.54□□□□□ -2.32
IFT140Q96RY7 RPL30P11-203ENST00000598995 310 ntBASIC0.54□□□□□ -2.32
IFT140Q96RY7 AC112220.3-201ENST00000605502 502 ntBASIC0.54□□□□□ -2.32
IFT140Q96RY7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.54□□□□□ -2.32
IFT140Q96RY7 AC084824.5-201ENST00000612009 413 ntBASIC0.54□□□□□ -2.32
IFT140Q96RY7 AL365204.3-201ENST00000612448 685 ntBASIC0.54□□□□□ -2.32
IFT140Q96RY7 U6.101-201ENST00000637707 76 ntBASIC0.54□□□□□ -2.32
IFT140Q96RY7 RNU1-124P-201ENST00000363861 145 ntBASIC0.54□□□□□ -2.32
IFT140Q96RY7 RNU6-657P-201ENST00000383904 107 ntBASIC0.54□□□□□ -2.32
IFT140Q96RY7 MIR32-201ENST00000384965 70 ntBASIC0.54□□□□□ -2.32
IFT140Q96RY7 RNU2-28P-201ENST00000410457 189 ntBASIC0.54□□□□□ -2.32
IFT140Q96RY7 BTF3L4P3-201ENST00000418879 476 ntBASIC0.54□□□□□ -2.32
IFT140Q96RY7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.54□□□□□ -2.32
IFT140Q96RY7 AC087477.1-201ENST00000465747 340 ntBASIC0.54□□□□□ -2.32
IFT140Q96RY7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.54□□□□□ -2.32
IFT140Q96RY7 CLIC4P2-201ENST00000601934 717 ntBASIC0.54□□□□□ -2.32
IFT140Q96RY7 AC010133.1-201ENST00000615809 842 ntBASIC0.54□□□□□ -2.32
IFT140Q96RY7 AC138627.2-201ENST00000624202 601 ntBASIC0.54□□□□□ -2.32
IFT140Q96RY7 AC080188.3-201ENST00000624842 748 ntBASIC0.54□□□□□ -2.32
IFT140Q96RY7 RNU6-40P-201ENST00000384254 107 ntBASIC0.53□□□□□ -2.33
IFT140Q96RY7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.53□□□□□ -2.33
IFT140Q96RY7 VN1R10P-201ENST00000447106 875 ntBASIC0.53□□□□□ -2.33
IFT140Q96RY7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.53□□□□□ -2.33
IFT140Q96RY7 AC013828.1-201ENST00000481845 158 ntBASIC0.53□□□□□ -2.33
IFT140Q96RY7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.53□□□□□ -2.33
IFT140Q96RY7 PSMC1P5-201ENST00000512850 177 ntBASIC0.53□□□□□ -2.33
IFT140Q96RY7 RNU6-885P-201ENST00000516607 104 ntBASIC0.53□□□□□ -2.33
IFT140Q96RY7 AP000860.1-201ENST00000605250 559 ntBASIC0.53□□□□□ -2.33
IFT140Q96RY7 AL021879.1-201ENST00000611756 288 ntBASIC0.53□□□□□ -2.33
IFT140Q96RY7 AL118556.2-201ENST00000614375 824 ntBASIC0.53□□□□□ -2.33
IFT140Q96RY7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.53□□□□□ -2.33
IFT140Q96RY7 RNU6-546P-201ENST00000383991 107 ntBASIC0.52□□□□□ -2.33
IFT140Q96RY7 RNU6-1005P-201ENST00000384519 107 ntBASIC0.52□□□□□ -2.33
IFT140Q96RY7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
IFT140Q96RY7 RNU2-64P-201ENST00000411315 191 ntBASIC0.52□□□□□ -2.33
IFT140Q96RY7 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.52□□□□□ -2.33
IFT140Q96RY7 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.52□□□□□ -2.33
IFT140Q96RY7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.52□□□□□ -2.33
IFT140Q96RY7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.52□□□□□ -2.33
IFT140Q96RY7 SNORD116-28-201ENST00000516123 91 ntBASIC0.52□□□□□ -2.33
IFT140Q96RY7 AC109329.1-201ENST00000518744 317 ntBASIC0.52□□□□□ -2.33
IFT140Q96RY7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.52□□□□□ -2.33
IFT140Q96RY7 MRPS36P5-201ENST00000551909 298 ntBASIC0.52□□□□□ -2.33
IFT140Q96RY7 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.52□□□□□ -2.33
IFT140Q96RY7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.52□□□□□ -2.33
IFT140Q96RY7 AC034229.4-201ENST00000607861 441 ntBASIC0.52□□□□□ -2.33
IFT140Q96RY7 AC004908.3-201ENST00000610248 625 ntBASIC0.52□□□□□ -2.33
IFT140Q96RY7 AC007792.1-201ENST00000623023 402 ntBASIC0.52□□□□□ -2.33
IFT140Q96RY7 AC138393.1-203ENST00000327086 343 ntBASIC0.51□□□□□ -2.33
IFT140Q96RY7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
IFT140Q96RY7 MTATP6P27-201ENST00000416987 621 ntBASIC0.51□□□□□ -2.33
IFT140Q96RY7 MTCO1P57-201ENST00000432182 261 ntBASIC0.51□□□□□ -2.33
IFT140Q96RY7 TRBVB-201ENST00000477100 408 ntBASIC0.51□□□□□ -2.33
IFT140Q96RY7 RNU6-703P-201ENST00000516946 107 ntBASIC0.51□□□□□ -2.33
IFT140Q96RY7 AP003392.2-201ENST00000527269 208 ntBASIC0.51□□□□□ -2.33
IFT140Q96RY7 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.51□□□□□ -2.33
IFT140Q96RY7 BX284668.6-201ENST00000606899 438 ntBASIC0.51□□□□□ -2.33
IFT140Q96RY7 AL132822.1-201ENST00000617063 513 ntBASIC0.51□□□□□ -2.33
IFT140Q96RY7 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.51□□□□□ -2.33
IFT140Q96RY7 AC008993.2-201ENST00000631744 806 ntBASIC0.51□□□□□ -2.33
IFT140Q96RY7 MIR338-201ENST00000636369 67 ntBASIC0.51□□□□□ -2.33
IFT140Q96RY7 AC245060.5-201ENST00000610778 3293 ntBASIC0.5□□□□□ -2.33
IFT140Q96RY7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
IFT140Q96RY7 U3.8-201ENST00000363675 217 ntBASIC0.5□□□□□ -2.33
IFT140Q96RY7 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.5□□□□□ -2.33
IFT140Q96RY7 MIR506-201ENST00000384998 124 ntBASIC0.5□□□□□ -2.33
IFT140Q96RY7 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.5□□□□□ -2.33
IFT140Q96RY7 RAC1P8-201ENST00000427086 527 ntBASIC0.5□□□□□ -2.33
IFT140Q96RY7 AC010153.1-201ENST00000432862 727 ntBASIC0.5□□□□□ -2.33
IFT140Q96RY7 MTCO3P5-201ENST00000433620 714 ntBASIC0.5□□□□□ -2.33
IFT140Q96RY7 AC132479.1-201ENST00000449160 144 ntBASIC0.5□□□□□ -2.33
IFT140Q96RY7 AC145146.1-201ENST00000496370 254 ntBASIC0.5□□□□□ -2.33
IFT140Q96RY7 MTCYBP43-201ENST00000513621 740 ntBASIC0.5□□□□□ -2.33
IFT140Q96RY7 RNA5SP135-201ENST00000517019 125 ntBASIC0.5□□□□□ -2.33
IFT140Q96RY7 ACA59.2-201ENST00000517061 156 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms