Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 FTH1P15-201ENST00000406984 280 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC00477Q96M19 NDUFS5P4-201ENST00000412983 318 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
LINC00477Q96M19 RPL26P27-201ENST00000414397 437 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 MTCO1P21-201ENST00000416634 589 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC00477Q96M19 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC00477Q96M19 AC002486.1-201ENST00000435098 391 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC00477Q96M19 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC00477Q96M19 AC073415.1-201ENST00000449240 153 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC00477Q96M19 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC00477Q96M19 RNU4-29P-201ENST00000515943 174 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 RNU6-1038P-201ENST00000516516 104 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 RNU1-40P-201ENST00000516816 164 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 RNU1-97P-201ENST00000516872 164 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 AC118273.2-201ENST00000532092 465 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 AC074050.1-201ENST00000563247 211 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 MIR3199-1-201ENST00000582434 88 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 AC007229.1-201ENST00000590455 412 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 AC008749.1-201ENST00000597650 306 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 AL021997.1-201ENST00000605757 193 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 MIR6134-201ENST00000617606 109 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 AL158209.2-201ENST00000619266 216 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 FRG1KP-201ENST00000623592 341 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC00477Q96M19 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC00477Q96M19 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
LINC00477Q96M19 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.66□□□□□ -2.14
LINC00477Q96M19 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC00477Q96M19 MTND5P30-201ENST00000452896 1731 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 MTND5P17-201ENST00000418405 1603 ntBASIC1.66□□□□□ -2.14
LINC00477Q96M19 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
LINC00477Q96M19 AC006020.1-201ENST00000420179 1854 ntBASIC1.65□□□□□ -2.14
LINC00477Q96M19 RNU6-552P-201ENST00000362869 119 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 Y_RNA.296-201ENST00000364930 108 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 RNU6-1127P-201ENST00000384580 107 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 MTCO3P41-201ENST00000414801 328 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC00477Q96M19 AC009963.1-201ENST00000417265 157 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LINC00477Q96M19 AC018634.1-201ENST00000437554 401 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 CALM1P1-201ENST00000442082 433 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 AL078601.1-201ENST00000444542 271 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 AC079781.2-201ENST00000446424 169 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC00477Q96M19 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC00477Q96M19 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.65□□□□□ -2.15
LINC00477Q96M19 AC023194.1-201ENST00000493084 308 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 GZMAP1-201ENST00000503054 631 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 AC091435.1-201ENST00000505442 584 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC00477Q96M19 MRPS17P9-201ENST00000511924 393 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.65□□□□□ -2.15
LINC00477Q96M19 RNU6-1178P-201ENST00000516674 107 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC00477Q96M19 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC00477Q96M19 OR5AQ1P-201ENST00000527596 927 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 AC016957.1-201ENST00000534895 309 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC00477Q96M19 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.65□□□□□ -2.15
LINC00477Q96M19 AC092325.1-201ENST00000566449 554 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 MIR4529-201ENST00000578110 78 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.65□□□□□ -2.15
LINC00477Q96M19 MIR548AC-201ENST00000585049 88 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.65□□□□□ -2.15
LINC00477Q96M19 AC174048.1-201ENST00000603389 144 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 AL136363.2-201ENST00000604173 851 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 AC069294.1-201ENST00000608397 350 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 AL359547.2-201ENST00000615810 418 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC00477Q96M19 AC139792.3-201ENST00000623525 224 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC00477Q96M19 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LINC00477Q96M19 AL136360.1-201ENST00000503377 1900 ntBASIC1.65□□□□□ -2.15
LINC00477Q96M19 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LINC00477Q96M19 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LINC00477Q96M19 RNU1-72P-201ENST00000362976 153 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 MIR10A-201ENST00000385043 110 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 U6atac.2-201ENST00000408644 118 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 RN7SKP158-201ENST00000410453 326 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 Y_RNA.623-201ENST00000411128 95 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 RPS3AP44-201ENST00000425466 790 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.64□□□□□ -2.15
LINC00477Q96M19 AL596276.1-201ENST00000434465 418 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 AL161651.1-201ENST00000440882 223 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 RNU7-180P-201ENST00000459240 63 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 AP001324.2-201ENST00000461163 319 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 AC019235.1-201ENST00000503847 207 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.64□□□□□ -2.15
LINC00477Q96M19 HMGB1P29-201ENST00000505659 499 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC00477Q96M19 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.64□□□□□ -2.15
LINC00477Q96M19 AC009646.1-201ENST00000510455 318 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 Y_RNA.655-201ENST00000515919 96 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 Y_RNA.687-201ENST00000516558 91 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms