Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL121594.1-201ENST00000475906 575 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 AP000797.1-201ENST00000478870 387 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 DUXAP5-201ENST00000529668 529 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 AC024614.2-201ENST00000577584 372 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 MIR548AC-201ENST00000585049 88 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 AL078605.1-201ENST00000603529 500 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 MIR502-201ENST00000606349 86 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 MIR7844-201ENST00000616161 122 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 AL132822.1-201ENST00000617063 513 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 AC009878.1-201ENST00000621819 340 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 AC099654.13-201ENST00000639774 207 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 RNU6-371P-201ENST00000364283 108 ntBASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 MIR10A-201ENST00000385043 110 ntBASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 MTCYBP36-201ENST00000404146 440 ntBASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 MIR1283-2-201ENST00000408621 87 ntBASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 RNA5SP390-201ENST00000410191 113 ntBASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 RNU2-23P-201ENST00000410545 195 ntBASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 UBE2V1P10-201ENST00000414685 269 ntBASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 AC138623.1-201ENST00000418060 216 ntBASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 MED13P1-201ENST00000428342 171 ntBASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 MTND2P29-201ENST00000438595 412 ntBASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 AL360271.2-201ENST00000447710 161 ntBASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 AC108078.2-201ENST00000510750 236 ntBASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 RNU6-667P-201ENST00000517186 102 ntBASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 ELOCP32-201ENST00000548625 324 ntBASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 ADI1P3-201ENST00000549509 470 ntBASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 AL139286.2-201ENST00000606838 396 ntBASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 SCARNA4-202ENST00000625402 129 ntBASIC1.67□□□□□ -2.14
ECHDC3Q96DC8 Y_RNA.22-201ENST00000362492 102 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 RNU1-17P-201ENST00000363022 152 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 SNORD115-3-201ENST00000363100 82 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 RNU6-611P-201ENST00000384276 104 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 SNORA24.1-201ENST00000384401 135 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 RNU6-1274P-201ENST00000384557 107 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 CBX3P9-201ENST00000402326 552 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 EEF1A1P40-201ENST00000412883 573 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 MTCYBP5-201ENST00000423752 1135 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 AC007283.2-201ENST00000424739 197 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 USP9YP18-201ENST00000425912 695 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 AL589872.1-201ENST00000426602 288 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 MTCYBP39-201ENST00000437562 491 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 SNORD13-201ENST00000459299 104 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 AC006512.1-201ENST00000468816 291 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 RNU6-123P-201ENST00000516163 102 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 Y_RNA.687-201ENST00000516558 91 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 AC018630.3-201ENST00000542637 96 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 DEFB131E-202ENST00000602581 683 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 AC011458.1-201ENST00000604034 617 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 AL136370.1-201ENST00000608166 691 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 AC108479.2-201ENST00000617314 601 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 U6.42-201ENST00000618440 107 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 AL159153.1-201ENST00000619688 317 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 RMST_7.1-201ENST00000621935 268 ntBASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
ECHDC3Q96DC8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
ECHDC3Q96DC8 SNORA8-201ENST00000384574 139 ntBASIC1.65□□□□□ -2.15
ECHDC3Q96DC8 CISD1P1-201ENST00000393907 327 ntBASIC1.65□□□□□ -2.15
ECHDC3Q96DC8 AC074117.2-201ENST00000417130 397 ntBASIC1.65□□□□□ -2.15
ECHDC3Q96DC8 RPS24P1-201ENST00000438550 371 ntBASIC1.65□□□□□ -2.15
ECHDC3Q96DC8 AF131216.2-201ENST00000512316 564 ntBASIC1.65□□□□□ -2.15
ECHDC3Q96DC8 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.65□□□□□ -2.15
ECHDC3Q96DC8 SNORA43.2-201ENST00000516652 128 ntBASIC1.65□□□□□ -2.15
ECHDC3Q96DC8 RN7SKP256-201ENST00000517201 314 ntBASIC1.65□□□□□ -2.15
ECHDC3Q96DC8 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.65□□□□□ -2.15
ECHDC3Q96DC8 AP000763.2-201ENST00000540641 163 ntBASIC1.65□□□□□ -2.15
ECHDC3Q96DC8 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.65□□□□□ -2.15
ECHDC3Q96DC8 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.65□□□□□ -2.15
ECHDC3Q96DC8 AC008521.1-201ENST00000587471 187 ntBASIC1.65□□□□□ -2.15
ECHDC3Q96DC8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.65□□□□□ -2.15
ECHDC3Q96DC8 HMGN1P30-201ENST00000589286 268 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms