Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.81□□□□□ -1.96
SKA1Q96BD8 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.81□□□□□ -1.96
SKA1Q96BD8 AC016691.1-201ENST00000441321 413 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 AC009238.1-201ENST00000442165 424 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 AC009237.6-201ENST00000446969 424 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 AL109933.2-201ENST00000452651 260 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.81□□□□□ -1.96
SKA1Q96BD8 SNORD109B-201ENST00000458961 67 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 SNORD109A-201ENST00000459128 67 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 AC003982.1-202ENST00000469928 248 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.81□□□□□ -1.96
SKA1Q96BD8 RPL37P25-201ENST00000507308 276 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 RN7SKP132-201ENST00000516001 208 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 SNORA48.11-201ENST00000517015 89 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SKA1Q96BD8 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SKA1Q96BD8 AC023050.3-201ENST00000541142 333 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 AC024909.2-201ENST00000553035 286 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 MTCO3P23-201ENST00000561363 289 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.81□□□□□ -1.96
SKA1Q96BD8 AC116312.1-201ENST00000606841 314 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.81□□□□□ -1.96
SKA1Q96BD8 AC009090.3-201ENST00000616553 565 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 AC048344.4-201ENST00000619744 527 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.81□□□□□ -1.96
SKA1Q96BD8 AC092608.2-201ENST00000624427 218 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SKA1Q96BD8 AC080100.1-201ENST00000624239 5356 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SKA1Q96BD8 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
SKA1Q96BD8 RNU6-1210P-201ENST00000363775 107 ntBASIC2.8□□□□□ -1.96
SKA1Q96BD8 MIR592-201ENST00000384959 97 ntBASIC2.8□□□□□ -1.96
SKA1Q96BD8 RN7SKP284-201ENST00000411002 343 ntBASIC2.8□□□□□ -1.96
SKA1Q96BD8 RNA5SP508-201ENST00000411327 119 ntBASIC2.8□□□□□ -1.96
SKA1Q96BD8 AC073415.1-201ENST00000449240 153 ntBASIC2.8□□□□□ -1.96
SKA1Q96BD8 RNU7-167P-201ENST00000459160 62 ntBASIC2.8□□□□□ -1.96
SKA1Q96BD8 RPL23AP45-201ENST00000476406 468 ntBASIC2.8□□□□□ -1.96
SKA1Q96BD8 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.8□□□□□ -1.96
SKA1Q96BD8 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.8□□□□□ -1.96
SKA1Q96BD8 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.8□□□□□ -1.96
SKA1Q96BD8 RNU6-586P-201ENST00000517265 104 ntBASIC2.8□□□□□ -1.96
SKA1Q96BD8 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.8□□□□□ -1.96
SKA1Q96BD8 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.8□□□□□ -1.96
SKA1Q96BD8 AL138976.2-201ENST00000563989 694 ntBASIC2.8□□□□□ -1.96
SKA1Q96BD8 MIR4446-201ENST00000578505 67 ntBASIC2.8□□□□□ -1.96
SKA1Q96BD8 AC005046.1-201ENST00000608515 625 ntBASIC2.8□□□□□ -1.96
SKA1Q96BD8 AC010297.1-201ENST00000623948 149 ntBASIC2.8□□□□□ -1.96
SKA1Q96BD8 FO624990.1-201ENST00000636373 85 ntBASIC2.8□□□□□ -1.96
SKA1Q96BD8 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SKA1Q96BD8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.79□□□□□ -1.96
SKA1Q96BD8 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.79□□□□□ -1.96
SKA1Q96BD8 SNORA25.6-201ENST00000364121 118 ntBASIC2.79□□□□□ -1.96
SKA1Q96BD8 RNU1-91P-201ENST00000364746 163 ntBASIC2.79□□□□□ -1.96
SKA1Q96BD8 RNA5SP126-201ENST00000365092 109 ntBASIC2.79□□□□□ -1.96
SKA1Q96BD8 RNU6-259P-201ENST00000383999 107 ntBASIC2.79□□□□□ -1.96
SKA1Q96BD8 RNU6-1158P-201ENST00000391167 107 ntBASIC2.79□□□□□ -1.96
SKA1Q96BD8 AL360182.1-201ENST00000397433 468 ntBASIC2.79□□□□□ -1.96
SKA1Q96BD8 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.79□□□□□ -1.96
SKA1Q96BD8 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.79□□□□□ -1.96
SKA1Q96BD8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.79□□□□□ -1.96
SKA1Q96BD8 snoU13.14-201ENST00000459372 104 ntBASIC2.79□□□□□ -1.96
SKA1Q96BD8 RPL30P12-201ENST00000474666 353 ntBASIC2.79□□□□□ -1.96
SKA1Q96BD8 AL121594.1-201ENST00000475906 575 ntBASIC2.79□□□□□ -1.96
SKA1Q96BD8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.79□□□□□ -1.96
SKA1Q96BD8 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.79□□□□□ -1.96
SKA1Q96BD8 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.79□□□□□ -1.96
SKA1Q96BD8 MTND4P7-201ENST00000523876 130 ntBASIC2.79□□□□□ -1.96
SKA1Q96BD8 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.79□□□□□ -1.96
SKA1Q96BD8 IMMP1LP2-201ENST00000552954 492 ntBASIC2.79□□□□□ -1.96
SKA1Q96BD8 AC093249.1-201ENST00000567049 203 ntBASIC2.79□□□□□ -1.96
SKA1Q96BD8 MIR3605-201ENST00000583214 100 ntBASIC2.79□□□□□ -1.96
SKA1Q96BD8 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.79□□□□□ -1.96
SKA1Q96BD8 SNORD14A-201ENST00000606526 91 ntBASIC2.79□□□□□ -1.96
SKA1Q96BD8 AC017083.3-201ENST00000609955 700 ntBASIC2.79□□□□□ -1.96
SKA1Q96BD8 Z99129.1-201ENST00000612510 255 ntBASIC2.79□□□□□ -1.96
SKA1Q96BD8 AC139792.3-201ENST00000623525 224 ntBASIC2.79□□□□□ -1.96
SKA1Q96BD8 MTND5P26-201ENST00000426018 1752 ntBASIC2.79□□□□□ -1.96
SKA1Q96BD8 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SKA1Q96BD8 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SKA1Q96BD8 ZNF271P-202ENST00000465539 1970 ntBASIC2.78□□□□□ -1.96
SKA1Q96BD8 Y_RNA.255-201ENST00000364581 97 ntBASIC2.78□□□□□ -1.96
SKA1Q96BD8 Y_RNA.481-201ENST00000384373 102 ntBASIC2.78□□□□□ -1.96
SKA1Q96BD8 AL138827.1-201ENST00000402666 306 ntBASIC2.78□□□□□ -1.96
SKA1Q96BD8 AL606923.1-201ENST00000406616 190 ntBASIC2.78□□□□□ -1.96
SKA1Q96BD8 AL353193.1-201ENST00000421444 268 ntBASIC2.78□□□□□ -1.96
SKA1Q96BD8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.78□□□□□ -1.96
SKA1Q96BD8 AC007969.2-201ENST00000441891 191 ntBASIC2.78□□□□□ -1.96
SKA1Q96BD8 RPS3P1-201ENST00000456781 192 ntBASIC2.78□□□□□ -1.96
SKA1Q96BD8 AC068781.1-201ENST00000488231 618 ntBASIC2.78□□□□□ -1.96
SKA1Q96BD8 MTND3P5-201ENST00000512798 333 ntBASIC2.78□□□□□ -1.96
SKA1Q96BD8 AC096725.1-201ENST00000514266 313 ntBASIC2.78□□□□□ -1.96
SKA1Q96BD8 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.78□□□□□ -1.96
SKA1Q96BD8 AC118273.2-201ENST00000532092 465 ntBASIC2.78□□□□□ -1.96
SKA1Q96BD8 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.78□□□□□ -1.96
SKA1Q96BD8 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.78□□□□□ -1.96
SKA1Q96BD8 AL136363.2-201ENST00000604173 851 ntBASIC2.78□□□□□ -1.96
SKA1Q96BD8 AL049779.4-201ENST00000604500 156 ntBASIC2.78□□□□□ -1.96
SKA1Q96BD8 AC002044.1-201ENST00000606707 158 ntBASIC2.78□□□□□ -1.96
SKA1Q96BD8 AC013412.1-201ENST00000610687 192 ntBASIC2.78□□□□□ -1.96
SKA1Q96BD8 AC245884.12-201ENST00000615364 59 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms