Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.9□□□□□ -1.79
RTF1Q92541 AL645944.1-201ENST00000603857 493 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 AP000787.2-201ENST00000604432 568 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 AL360085.1-201ENST00000604713 532 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 AC007938.3-201ENST00000604965 623 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 AC009229.3-201ENST00000608056 282 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 MIR7106-201ENST00000612419 65 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RTF1Q92541 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RTF1Q92541 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.9□□□□□ -1.79
RTF1Q92541 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RTF1Q92541 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RTF1Q92541 AC022336.2-201ENST00000568966 2538 ntBASIC3.89□□□□□ -1.79
RTF1Q92541 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RTF1Q92541 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.89□□□□□ -1.79
RTF1Q92541 SNORD14B-201ENST00000364533 90 ntBASIC3.89□□□□□ -1.79
RTF1Q92541 DEFB109C-201ENST00000382575 264 ntBASIC3.89□□□□□ -1.79
RTF1Q92541 DEFB109B-201ENST00000382656 264 ntBASIC3.89□□□□□ -1.79
RTF1Q92541 RNU6-1040P-201ENST00000383974 107 ntBASIC3.89□□□□□ -1.79
RTF1Q92541 SNORA40C-201ENST00000391285 128 ntBASIC3.89□□□□□ -1.79
RTF1Q92541 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.89□□□□□ -1.79
RTF1Q92541 AL139132.1-201ENST00000431587 344 ntBASIC3.89□□□□□ -1.79
RTF1Q92541 SNRPEP9-201ENST00000436794 238 ntBASIC3.89□□□□□ -1.79
RTF1Q92541 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.89□□□□□ -1.79
RTF1Q92541 RPS29P26-201ENST00000477483 171 ntBASIC3.89□□□□□ -1.79
RTF1Q92541 SMURF2P1-201ENST00000514992 481 ntBASIC3.89□□□□□ -1.79
RTF1Q92541 RNU6-976P-201ENST00000516086 111 ntBASIC3.89□□□□□ -1.79
RTF1Q92541 Y_RNA.670-201ENST00000516255 105 ntBASIC3.89□□□□□ -1.79
RTF1Q92541 RNU6-1045P-201ENST00000516321 107 ntBASIC3.89□□□□□ -1.79
RTF1Q92541 RNU6-1213P-201ENST00000517075 94 ntBASIC3.89□□□□□ -1.79
RTF1Q92541 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.89□□□□□ -1.79
RTF1Q92541 AC004805.2-201ENST00000605382 482 ntBASIC3.89□□□□□ -1.79
RTF1Q92541 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RTF1Q92541 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.89□□□□□ -1.79
RTF1Q92541 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RTF1Q92541 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.89□□□□□ -1.79
RTF1Q92541 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.89□□□□□ -1.79
RTF1Q92541 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.89□□□□□ -1.79
RTF1Q92541 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.89□□□□□ -1.79
RTF1Q92541 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.88□□□□□ -1.79
RTF1Q92541 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.88□□□□□ -1.79
RTF1Q92541 SNORA33.2-201ENST00000365413 134 ntBASIC3.88□□□□□ -1.79
RTF1Q92541 RNU6-851P-201ENST00000384565 107 ntBASIC3.88□□□□□ -1.79
RTF1Q92541 MIR606-201ENST00000384851 96 ntBASIC3.88□□□□□ -1.79
RTF1Q92541 SNORD73A-201ENST00000386062 65 ntBASIC3.88□□□□□ -1.79
RTF1Q92541 SNORA75.6-201ENST00000391318 127 ntBASIC3.88□□□□□ -1.79
RTF1Q92541 U3.42-201ENST00000408746 214 ntBASIC3.88□□□□□ -1.79
RTF1Q92541 MTND2P23-201ENST00000422990 651 ntBASIC3.88□□□□□ -1.79
RTF1Q92541 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RTF1Q92541 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.88□□□□□ -1.79
RTF1Q92541 AC236972.1-201ENST00000433225 199 ntBASIC3.88□□□□□ -1.79
RTF1Q92541 NIPA2P5-201ENST00000452282 464 ntBASIC3.88□□□□□ -1.79
RTF1Q92541 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RTF1Q92541 AL583843.1-201ENST00000456070 346 ntBASIC3.88□□□□□ -1.79
RTF1Q92541 RNU7-187P-201ENST00000458985 68 ntBASIC3.88□□□□□ -1.79
RTF1Q92541 HMGN1P10-201ENST00000474557 553 ntBASIC3.88□□□□□ -1.79
RTF1Q92541 RNU6-327P-201ENST00000516270 127 ntBASIC3.88□□□□□ -1.79
RTF1Q92541 IGHV3-76-201ENST00000522465 295 ntBASIC3.88□□□□□ -1.79
RTF1Q92541 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.88□□□□□ -1.79
RTF1Q92541 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
RTF1Q92541 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.88□□□□□ -1.79
RTF1Q92541 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.88□□□□□ -1.79
RTF1Q92541 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RTF1Q92541 RNU6-738P-201ENST00000384531 106 ntBASIC3.87□□□□□ -1.79
RTF1Q92541 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RTF1Q92541 AL445529.1-201ENST00000398713 389 ntBASIC3.87□□□□□ -1.79
RTF1Q92541 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.87□□□□□ -1.79
RTF1Q92541 RPS27P29-201ENST00000463110 252 ntBASIC3.87□□□□□ -1.79
RTF1Q92541 AC139453.3-201ENST00000493276 369 ntBASIC3.87□□□□□ -1.79
RTF1Q92541 SNORA31.19-201ENST00000517079 126 ntBASIC3.87□□□□□ -1.79
RTF1Q92541 AC093331.1-201ENST00000521474 169 ntBASIC3.87□□□□□ -1.79
RTF1Q92541 AC104576.1-201ENST00000524225 88 ntBASIC3.87□□□□□ -1.79
RTF1Q92541 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.87□□□□□ -1.79
RTF1Q92541 AC011494.1-201ENST00000596454 237 ntBASIC3.87□□□□□ -1.79
RTF1Q92541 AL033523.1-201ENST00000605153 153 ntBASIC3.87□□□□□ -1.79
RTF1Q92541 AC123912.5-201ENST00000605470 343 ntBASIC3.87□□□□□ -1.79
RTF1Q92541 AL355802.3-201ENST00000607571 545 ntBASIC3.87□□□□□ -1.79
RTF1Q92541 AC019193.3-201ENST00000609144 554 ntBASIC3.87□□□□□ -1.79
RTF1Q92541 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.87□□□□□ -1.79
RTF1Q92541 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.87□□□□□ -1.79
RTF1Q92541 Z69720.2-201ENST00000624755 279 ntBASIC3.87□□□□□ -1.79
RTF1Q92541 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.87□□□□□ -1.79
RTF1Q92541 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RTF1Q92541 AL672296.1-201ENST00000427780 2158 ntBASIC3.87□□□□□ -1.79
RTF1Q92541 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.87□□□□□ -1.79
RTF1Q92541 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
RTF1Q92541 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RTF1Q92541 SRP72P2-201ENST00000344851 1979 ntBASIC3.86□□□□□ -1.79
RTF1Q92541 RNU6-1115P-201ENST00000362490 106 ntBASIC3.86□□□□□ -1.79
RTF1Q92541 Y_RNA.216-201ENST00000364205 93 ntBASIC3.86□□□□□ -1.79
RTF1Q92541 Y_RNA.404-201ENST00000383978 102 ntBASIC3.86□□□□□ -1.79
RTF1Q92541 RNU6-166P-201ENST00000384371 107 ntBASIC3.86□□□□□ -1.79
RTF1Q92541 RNU6-1160P-201ENST00000384546 104 ntBASIC3.86□□□□□ -1.79
RTF1Q92541 RNU6-140P-201ENST00000384566 108 ntBASIC3.86□□□□□ -1.79
RTF1Q92541 RNU6-306P-201ENST00000384617 107 ntBASIC3.86□□□□□ -1.79
RTF1Q92541 PMCHL1-202ENST00000423102 261 ntBASIC3.86□□□□□ -1.79
RTF1Q92541 USMG5P1-201ENST00000425964 177 ntBASIC3.86□□□□□ -1.79
RTF1Q92541 USP9YP30-201ENST00000430729 455 ntBASIC3.86□□□□□ -1.79
RTF1Q92541 AL512844.2-201ENST00000433990 593 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms