Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PNLDC1Q8NA58 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PNLDC1Q8NA58 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PNLDC1Q8NA58 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PNLDC1Q8NA58 ZNF299P-201ENST00000406845 1804 ntBASIC3.07□□□□□ -1.92
PNLDC1Q8NA58 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.07□□□□□ -1.92
PNLDC1Q8NA58 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PNLDC1Q8NA58 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PNLDC1Q8NA58 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PNLDC1Q8NA58 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 Y_RNA.176-201ENST00000363815 109 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 DEFB109C-201ENST00000382575 264 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 DEFB109B-201ENST00000382656 264 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 AP002088.1-201ENST00000382740 395 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 Y_RNA.401-201ENST00000383965 117 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 U8.11-201ENST00000384699 133 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 U8.12-201ENST00000384701 133 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 MIR23B-201ENST00000384832 97 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 RNU6-101P-201ENST00000410323 104 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 MTND3P9-201ENST00000429526 346 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 RPL21P2-201ENST00000440049 481 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 SNORD105B-201ENST00000458770 79 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 U8.18-201ENST00000459285 133 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 U8.21-201ENST00000459536 136 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 AC084357.1-201ENST00000473404 255 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 AC092185.1-201ENST00000491371 97 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 RPL22P13-201ENST00000493291 347 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 MTND5P9-201ENST00000503854 1755 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 MRPS35P2-201ENST00000508242 191 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 SNORA40.14-201ENST00000516543 86 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 SNORA67.7-201ENST00000516664 135 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 AC107934.2-201ENST00000518653 310 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 IGHV3-76-201ENST00000522465 295 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 AP004242.1-201ENST00000533701 349 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 HSBP1P1-201ENST00000555205 166 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 AL355297.3-201ENST00000604082 446 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 MIR1244-1-201ENST00000612829 85 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 MIR1244-3-201ENST00000635744 85 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 MIR1244-2-201ENST00000636449 85 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 MIR1244-4-202ENST00000636813 85 ntBASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.06□□□□□ -1.92
PNLDC1Q8NA58 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 AL513302.2-201ENST00000562313 1842 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 AC032011.1-201ENST00000611703 1549 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 RNU6-942P-201ENST00000363002 107 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 RNU5E-7P-201ENST00000365290 117 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 Y_RNA.380-201ENST00000365663 111 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 SNORA5A-201ENST00000384111 134 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 SNORA11-201ENST00000408789 128 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 MIR1252-201ENST00000408861 65 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 RNA5SP129-201ENST00000410276 118 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 RAB9AP3-201ENST00000412737 573 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 TOMM20P4-201ENST00000427861 435 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 RAB9AP1-201ENST00000449393 573 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 MTATP6P7-201ENST00000453315 681 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 RNU6-377P-201ENST00000515965 102 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 RNU1-103P-201ENST00000516502 125 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 RNA5SP380-201ENST00000517190 98 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 IGKV2D-19-201ENST00000523346 262 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 AL161670.1-201ENST00000554348 137 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 AC004584.2-201ENST00000570407 410 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 AC016727.2-201ENST00000603988 621 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 Z98751.3-201ENST00000604447 521 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 AC124312.5-201ENST00000604451 268 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 SNORA51-201ENST00000606420 132 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 AC006023.2-201ENST00000609916 167 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 AC107871.2-201ENST00000612894 502 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 AC039056.2-201ENST00000622261 511 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 AC027309.3-201ENST00000623419 351 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 AL034408.1-202ENST00000636088 415 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 U6.99-201ENST00000637524 83 ntBASIC3.05□□□□□ -1.92
PNLDC1Q8NA58 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms