Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RPL7P43-201ENST00000478876 753 ntBASIC2.71□□□□□ -1.98
BEST3Q8N1M1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.71□□□□□ -1.98
BEST3Q8N1M1 AC006483.1-201ENST00000487308 313 ntBASIC2.71□□□□□ -1.98
BEST3Q8N1M1 AC008628.2-201ENST00000502605 298 ntBASIC2.71□□□□□ -1.98
BEST3Q8N1M1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.71□□□□□ -1.98
BEST3Q8N1M1 AC091826.1-201ENST00000514065 313 ntBASIC2.71□□□□□ -1.98
BEST3Q8N1M1 RN7SKP43-201ENST00000516173 320 ntBASIC2.71□□□□□ -1.98
BEST3Q8N1M1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.71□□□□□ -1.98
BEST3Q8N1M1 COPS8P3-201ENST00000526024 482 ntBASIC2.71□□□□□ -1.98
BEST3Q8N1M1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
BEST3Q8N1M1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.71□□□□□ -1.98
BEST3Q8N1M1 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.71□□□□□ -1.98
BEST3Q8N1M1 MIR3672-201ENST00000584290 82 ntBASIC2.71□□□□□ -1.98
BEST3Q8N1M1 AC010378.1-201ENST00000619270 362 ntBASIC2.71□□□□□ -1.98
BEST3Q8N1M1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
BEST3Q8N1M1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
BEST3Q8N1M1 AL035425.3-201ENST00000564206 4996 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.7□□□□□ -1.98
BEST3Q8N1M1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.7□□□□□ -1.98
BEST3Q8N1M1 Y_RNA.212-201ENST00000364177 102 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 SNORA9.2-201ENST00000365361 133 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
BEST3Q8N1M1 RNU6-851P-201ENST00000384565 107 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 RNU6-1106P-201ENST00000390845 107 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.7□□□□□ -1.98
BEST3Q8N1M1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.7□□□□□ -1.98
BEST3Q8N1M1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
BEST3Q8N1M1 PPP1R2P5-201ENST00000457256 603 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 MRPL42P6-201ENST00000486397 371 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 RNA5SP367-201ENST00000516557 118 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 SNORA43.2-201ENST00000516652 128 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 RNU6-1332P-201ENST00000516666 104 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 RNU7-30P-201ENST00000516835 62 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.7□□□□□ -1.98
BEST3Q8N1M1 AC107016.2-201ENST00000547968 190 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 CR383656.8-201ENST00000549046 145 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 GTF3AP2-201ENST00000557014 266 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 AC026464.5-201ENST00000562497 722 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 MIR3942-201ENST00000585264 109 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 AC023043.2-201ENST00000589678 1026 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 AC020895.1-201ENST00000595362 272 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 AC005261.5-201ENST00000596280 355 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 AL355877.2-201ENST00000603670 358 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 AC091152.3-201ENST00000604227 325 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 AC011890.2-201ENST00000613393 294 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 AL138726.1-201ENST00000614873 333 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.7□□□□□ -1.98
BEST3Q8N1M1 U4.7-201ENST00000638126 106 ntBASIC2.7□□□□□ -1.98
BEST3Q8N1M1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
BEST3Q8N1M1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.7□□□□□ -1.98
BEST3Q8N1M1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
BEST3Q8N1M1 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
BEST3Q8N1M1 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
BEST3Q8N1M1 RNU6-78P-201ENST00000362897 107 ntBASIC2.69□□□□□ -1.98
BEST3Q8N1M1 Y_RNA.301-201ENST00000364990 103 ntBASIC2.69□□□□□ -1.98
BEST3Q8N1M1 RNU6-1329P-201ENST00000365664 107 ntBASIC2.69□□□□□ -1.98
BEST3Q8N1M1 SNORA18.3-201ENST00000384122 132 ntBASIC2.69□□□□□ -1.98
BEST3Q8N1M1 RNU6-19P-201ENST00000384718 107 ntBASIC2.69□□□□□ -1.98
BEST3Q8N1M1 FTH1P15-201ENST00000406984 280 ntBASIC2.69□□□□□ -1.98
BEST3Q8N1M1 Y_RNA.604-201ENST00000410574 102 ntBASIC2.69□□□□□ -1.98
BEST3Q8N1M1 UBE2V1P4-201ENST00000425374 344 ntBASIC2.69□□□□□ -1.98
BEST3Q8N1M1 PTGES3P4-201ENST00000426243 356 ntBASIC2.69□□□□□ -1.98
BEST3Q8N1M1 AC009414.1-201ENST00000427200 443 ntBASIC2.69□□□□□ -1.98
BEST3Q8N1M1 USP9YP8-201ENST00000441913 500 ntBASIC2.69□□□□□ -1.98
BEST3Q8N1M1 RPL32P28-201ENST00000443577 397 ntBASIC2.69□□□□□ -1.98
BEST3Q8N1M1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.69□□□□□ -1.98
BEST3Q8N1M1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.69□□□□□ -1.98
BEST3Q8N1M1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.69□□□□□ -1.98
BEST3Q8N1M1 UBE2DNL-203ENST00000474922 222 ntBASIC2.69□□□□□ -1.98
BEST3Q8N1M1 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
BEST3Q8N1M1 RNU6-377P-201ENST00000515965 102 ntBASIC2.69□□□□□ -1.98
BEST3Q8N1M1 ACA59.2-201ENST00000517061 156 ntBASIC2.69□□□□□ -1.98
BEST3Q8N1M1 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.69□□□□□ -1.98
BEST3Q8N1M1 AP005597.4-201ENST00000526762 229 ntBASIC2.69□□□□□ -1.98
BEST3Q8N1M1 AC026371.1-201ENST00000551867 419 ntBASIC2.69□□□□□ -1.98
BEST3Q8N1M1 AC005668.1-201ENST00000571142 476 ntBASIC2.69□□□□□ -1.98
BEST3Q8N1M1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.69□□□□□ -1.98
BEST3Q8N1M1 MTND4P12-201ENST00000498999 1377 ntBASIC2.69□□□□□ -1.98
BEST3Q8N1M1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
BEST3Q8N1M1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
BEST3Q8N1M1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
BEST3Q8N1M1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.68□□□□□ -1.98
BEST3Q8N1M1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
BEST3Q8N1M1 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
BEST3Q8N1M1 RNU6-858P-201ENST00000362436 107 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 RNU6-867P-201ENST00000364956 107 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 SNORD116-11-201ENST00000383882 92 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 Y_RNA.500-201ENST00000384466 111 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 MIR887-201ENST00000401258 79 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 AL031121.1-201ENST00000406553 254 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 MIR1289-1-201ENST00000408836 144 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.68□□□□□ -1.98
BEST3Q8N1M1 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.68□□□□□ -1.98
BEST3Q8N1M1 AL358075.3-201ENST00000426289 226 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 AC236972.1-201ENST00000433225 199 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 AL031274.1-201ENST00000450334 232 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.68□□□□□ -1.98
BEST3Q8N1M1 AL441985.1-201ENST00000457727 251 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 AP004217.1-201ENST00000480579 346 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms