Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNU6-903P-201ENST00000391270 109 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 AL133475.1-201ENST00000404414 305 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 RNU2-3P-201ENST00000410144 191 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 MTCO3P41-201ENST00000414801 328 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 AL356320.1-201ENST00000429616 163 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 MICF-203ENST00000432679 129 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 DNAJC19P4-201ENST00000440115 345 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 CALM1P1-201ENST00000442082 433 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 MED28P2-201ENST00000475771 317 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 AC079804.2-201ENST00000490376 200 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 ANXA2P1-201ENST00000505539 926 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 LRRC34P2-201ENST00000514850 553 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 SCARNA3-201ENST00000517097 143 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 AP003034.1-201ENST00000534621 422 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 BNIP3P6-201ENST00000549284 499 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 AC017083.3-201ENST00000609955 700 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 MIR6895-201ENST00000613497 78 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 AC026585.1-201ENST00000619582 524 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 AC138627.2-201ENST00000624202 601 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 MIR7157-201ENST00000635801 60 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 MTND4P14-201ENST00000435799 1354 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 AC005336.3-201ENST00000623833 2679 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 RNU6-623P-201ENST00000363143 105 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 Y_RNA.409-201ENST00000383990 98 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 RNU6-1127P-201ENST00000384580 107 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 RAP1BP3-201ENST00000407180 549 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 RNU2-25P-201ENST00000411041 191 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 CYCSP33-201ENST00000414485 327 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 AL135786.1-201ENST00000415892 214 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 AL606489.2-201ENST00000433886 234 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 AL031659.1-201ENST00000447075 539 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 AC012308.1-201ENST00000451232 178 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 SCARNA18-201ENST00000459004 134 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 AL163973.1-201ENST00000484753 577 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 RPL36AP48-201ENST00000485521 314 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 RPL9P6-201ENST00000492764 598 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 AC023141.11-201ENST00000508864 202 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 RNA5SP112-201ENST00000515937 99 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 RNU5B-3P-201ENST00000516601 115 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 SNRPGP18-201ENST00000553000 214 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 HIF1AP1-201ENST00000553642 175 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 AP001596.2-201ENST00000608410 312 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 AC009831.4-201ENST00000620744 325 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 AL031601.2-202ENST00000622650 282 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 AC124864.2-201ENST00000624736 186 ntBASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.05□□□□□ -2.08
C9orf40Q8IXQ3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 AC138393.1-203ENST00000327086 343 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 RNU6-486P-201ENST00000363116 107 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 SNORA67.1-201ENST00000364749 141 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 RNU6-1303P-201ENST00000364841 107 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 RNU6-434P-201ENST00000384376 107 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 SNORA16.2-201ENST00000390991 127 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 MTCO3P40-201ENST00000392516 676 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 RNA5SP425-201ENST00000410336 112 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 RN7SKP223-201ENST00000410582 62 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 MORF4L1P6-201ENST00000418771 268 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 VN1R108P-201ENST00000431580 830 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 AC073415.1-201ENST00000449240 153 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 AC006026.2-201ENST00000457376 180 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 SRRM1P2-201ENST00000464531 1192 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 RPL22P13-201ENST00000493291 347 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 SNORA25.11-201ENST00000515935 105 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 AP000889.2-201ENST00000532684 490 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 AC245505.1-201ENST00000556398 224 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 AC026464.5-201ENST00000562497 722 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms