Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC090616.3-201ENST00000582184 217 ntBASIC2.27□□□□□ -2.05
CCDC71Q8IV32 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC71Q8IV32 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC71Q8IV32 AF250324.2-201ENST00000608299 610 ntBASIC2.27□□□□□ -2.05
CCDC71Q8IV32 AC093788.1-201ENST00000609356 927 ntBASIC2.27□□□□□ -2.05
CCDC71Q8IV32 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC71Q8IV32 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.27□□□□□ -2.05
CCDC71Q8IV32 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC71Q8IV32 CTSLP2-204ENST00000629029 392 ntBASIC2.27□□□□□ -2.05
CCDC71Q8IV32 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC71Q8IV32 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC71Q8IV32 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC71Q8IV32 AL354685.2-201ENST00000448218 1447 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC71Q8IV32 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC71Q8IV32 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC71Q8IV32 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC71Q8IV32 RNA5SP456-201ENST00000364002 114 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 RNU1-51P-201ENST00000365345 176 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 SNORA69-201ENST00000383895 132 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 Y_RNA.516-201ENST00000384541 124 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 RNU6-19P-201ENST00000384718 107 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 MIR10A-201ENST00000385043 110 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 RNU2-3P-201ENST00000410144 191 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.26□□□□□ -2.05
CCDC71Q8IV32 AC016831.2-201ENST00000417179 352 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC71Q8IV32 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC71Q8IV32 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC71Q8IV32 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC71Q8IV32 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC71Q8IV32 RNU2-69P-201ENST00000516061 100 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 IGLV3-17-201ENST00000519099 244 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.26□□□□□ -2.05
CCDC71Q8IV32 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC71Q8IV32 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.26□□□□□ -2.05
CCDC71Q8IV32 MIR5694-201ENST00000581190 76 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 MIR3941-201ENST00000582572 103 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 MIR4424-201ENST00000585257 86 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 AC025165.5-201ENST00000602802 578 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 AC012557.2-201ENST00000605919 418 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 AC010378.1-201ENST00000619270 362 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 U4.3-201ENST00000621047 82 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 AC022418.1-201ENST00000624118 445 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 AC098679.4-201ENST00000624241 654 ntBASIC2.26□□□□□ -2.05
CCDC71Q8IV32 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC71Q8IV32 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC71Q8IV32 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CCDC71Q8IV32 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CCDC71Q8IV32 RNU6-72P-201ENST00000384285 79 ntBASIC2.25□□□□□ -2.05
CCDC71Q8IV32 RNU6-1215P-201ENST00000384441 102 ntBASIC2.25□□□□□ -2.05
CCDC71Q8IV32 SNORA80E-201ENST00000384744 137 ntBASIC2.25□□□□□ -2.05
CCDC71Q8IV32 SNORA16.2-201ENST00000390991 127 ntBASIC2.25□□□□□ -2.05
CCDC71Q8IV32 AL513475.1-201ENST00000406602 315 ntBASIC2.25□□□□□ -2.05
CCDC71Q8IV32 RAP1BP3-201ENST00000407180 549 ntBASIC2.25□□□□□ -2.05
CCDC71Q8IV32 RNU4-53P-201ENST00000410828 140 ntBASIC2.25□□□□□ -2.05
CCDC71Q8IV32 CYCSP33-201ENST00000414485 327 ntBASIC2.25□□□□□ -2.05
CCDC71Q8IV32 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.25□□□□□ -2.05
CCDC71Q8IV32 Z98742.3-201ENST00000418637 326 ntBASIC2.25□□□□□ -2.05
CCDC71Q8IV32 PTGES3P4-201ENST00000426243 356 ntBASIC2.25□□□□□ -2.05
CCDC71Q8IV32 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC71Q8IV32 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC71Q8IV32 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC71Q8IV32 MTAPP1-201ENST00000489154 819 ntBASIC2.25□□□□□ -2.05
CCDC71Q8IV32 GZMAP1-201ENST00000503054 631 ntBASIC2.25□□□□□ -2.05
CCDC71Q8IV32 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC71Q8IV32 AC079140.5-201ENST00000507882 310 ntBASIC2.25□□□□□ -2.05
CCDC71Q8IV32 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.25□□□□□ -2.05
CCDC71Q8IV32 RNU5F-8P-201ENST00000515941 111 ntBASIC2.25□□□□□ -2.05
CCDC71Q8IV32 MTND4P7-201ENST00000523876 130 ntBASIC2.25□□□□□ -2.05
CCDC71Q8IV32 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC71Q8IV32 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC71Q8IV32 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC71Q8IV32 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC71Q8IV32 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.25□□□□□ -2.05
CCDC71Q8IV32 AC103810.1-201ENST00000579873 453 ntBASIC2.25□□□□□ -2.05
CCDC71Q8IV32 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC71Q8IV32 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
CCDC71Q8IV32 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.25□□□□□ -2.05
CCDC71Q8IV32 ZNF658B-202ENST00000615961 3375 ntBASIC2.25□□□□□ -2.05
CCDC71Q8IV32 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CCDC71Q8IV32 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC71Q8IV32 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CCDC71Q8IV32 AC069528.2-201ENST00000624849 1991 ntBASIC2.24□□□□□ -2.05
CCDC71Q8IV32 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC71Q8IV32 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC71Q8IV32 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CCDC71Q8IV32 Y_RNA.372-201ENST00000365599 102 ntBASIC2.24□□□□□ -2.05
CCDC71Q8IV32 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC71Q8IV32 Y_RNA.480-201ENST00000384364 102 ntBASIC2.24□□□□□ -2.05
CCDC71Q8IV32 RNU6-748P-201ENST00000384648 107 ntBASIC2.24□□□□□ -2.05
CCDC71Q8IV32 MIR518C-201ENST00000384822 101 ntBASIC2.24□□□□□ -2.05
CCDC71Q8IV32 CIR1P3-201ENST00000405137 479 ntBASIC2.24□□□□□ -2.05
CCDC71Q8IV32 AL590002.1-201ENST00000406554 418 ntBASIC2.24□□□□□ -2.05
CCDC71Q8IV32 RNU6-648P-201ENST00000410190 107 ntBASIC2.24□□□□□ -2.05
CCDC71Q8IV32 AF274854.1-201ENST00000413236 615 ntBASIC2.24□□□□□ -2.05
CCDC71Q8IV32 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC71Q8IV32 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.24□□□□□ -2.05
CCDC71Q8IV32 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms