Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MIR3910-1-201ENST00000580936 111 ntBASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 MIR3944-201ENST00000581277 108 ntBASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 RNU1-105P-201ENST00000363470 161 ntBASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 U3.13-201ENST00000364804 214 ntBASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 RNU6-187P-201ENST00000384139 106 ntBASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 MIR147B-201ENST00000390185 80 ntBASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 RPL23AP95-201ENST00000426806 265 ntBASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 TBCAP1-201ENST00000436520 327 ntBASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 AC104332.1-201ENST00000440471 797 ntBASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 RNU5B-3P-201ENST00000516601 115 ntBASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 RNU6-711P-201ENST00000517255 106 ntBASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 HSPE1P4-201ENST00000550617 308 ntBASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 AC105137.2-201ENST00000569073 466 ntBASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 AC006557.5-201ENST00000603126 811 ntBASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 SNORA51-201ENST00000606420 132 ntBASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 AL121772.2-201ENST00000614331 297 ntBASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 SCN1A-220ENST00000641603 12506 ntBASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.39□□□□□ -1.71
NPAS4Q8IUM7 AP000560.1-201ENST00000624150 1937 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 AL391987.6-201ENST00000305671 199 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 AC092268.1-201ENST00000342691 405 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 Y_RNA.54-201ENST00000362766 105 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 Y_RNA.405-201ENST00000383979 100 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 RNU6-746P-201ENST00000384112 109 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 Y_RNA.451-201ENST00000384200 100 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 RNU6-886P-201ENST00000384319 105 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 Y_RNA.524-201ENST00000384564 100 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 Y_RNA.561-201ENST00000384694 100 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 AL603910.2-201ENST00000407268 136 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 Y_RNA.592-201ENST00000410274 109 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 SNORA57.3-201ENST00000411095 141 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 AL358453.1-201ENST00000422522 250 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 AC115990.1-201ENST00000526957 301 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 CYCSP30-201ENST00000546447 172 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 AC025281.1-201ENST00000567026 265 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 RNU6-91P-201ENST00000607774 107 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 AC091903.1-201ENST00000624322 454 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 AL450472.1-202ENST00000637286 180 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 AC002543.1-201ENST00000299783 1954 ntBASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPAS4Q8IUM7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 RBBP8P1-201ENST00000449447 1844 ntBASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 MIR208A-201ENST00000362287 71 ntBASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 RNA5SP252-201ENST00000391131 119 ntBASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 RN7SKP156-201ENST00000410308 342 ntBASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 RN7SKP61-201ENST00000410642 295 ntBASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 RNU2-49P-201ENST00000410666 184 ntBASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 SDAD1P3-201ENST00000427380 333 ntBASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 AC078809.1-201ENST00000427601 140 ntBASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 MTCO3P29-201ENST00000432119 779 ntBASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 GPM6BP3-201ENST00000442797 145 ntBASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 RNU7-87P-201ENST00000459343 62 ntBASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 AC090897.2-201ENST00000581715 130 ntBASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 RMST_6.1-201ENST00000611980 203 ntBASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NPAS4Q8IUM7 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 snoU2_19.2-201ENST00000363024 80 ntBASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 SNORD115-32-201ENST00000364079 82 ntBASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 SNORD46.1-201ENST00000364139 104 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms