Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.61□□□□□ -1.99
LDB1Q86U70 CKS1BP7-201ENST00000522230 235 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 AL118558.2-201ENST00000556294 238 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.61□□□□□ -1.99
LDB1Q86U70 GTF3AP2-201ENST00000557014 266 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 MIR3616-201ENST00000584070 92 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 ELOCP29-201ENST00000588193 334 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 AC010525.2-201ENST00000590920 195 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.61□□□□□ -1.99
LDB1Q86U70 AC092747.3-201ENST00000603769 301 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 APOOP1-201ENST00000604695 592 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 RNU6-89P-201ENST00000606519 100 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.61□□□□□ -1.99
LDB1Q86U70 AC096772.1-201ENST00000609146 564 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 MIR7157-201ENST00000635801 60 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
LDB1Q86U70 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.61□□□□□ -1.99
LDB1Q86U70 RNU6-487P-201ENST00000365430 104 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 Y_RNA.453-201ENST00000384223 109 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 MIR634-201ENST00000385208 97 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
LDB1Q86U70 SNORD115-47-201ENST00000391226 86 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 Y_RNA.599-201ENST00000410489 109 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 RNA5SP492-201ENST00000411330 114 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.6□□□□□ -1.99
LDB1Q86U70 SNRPEP10-201ENST00000420249 274 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 ERLEC1P1-201ENST00000433806 578 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.6□□□□□ -1.99
LDB1Q86U70 SNORD109B-201ENST00000458961 67 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 SNORD109A-201ENST00000459128 67 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 RNU6-1208P-201ENST00000459588 107 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 RPS27AP9-201ENST00000477681 438 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 RPL7P43-201ENST00000478876 753 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 RPL36AP48-201ENST00000485521 314 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.6□□□□□ -1.99
LDB1Q86U70 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.6□□□□□ -1.99
LDB1Q86U70 AC011352.1-201ENST00000512300 793 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 RNA5SP112-201ENST00000515937 99 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 SNORA14.1-201ENST00000516113 141 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 AC109479.2-201ENST00000517842 174 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
LDB1Q86U70 AC078814.3-201ENST00000553036 491 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 AC021646.1-201ENST00000605469 484 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 AC092807.2-201ENST00000609367 243 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.6□□□□□ -1.99
LDB1Q86U70 MIR3688-2-201ENST00000636963 87 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 U4.7-201ENST00000638126 106 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
LDB1Q86U70 RBBP8P1-201ENST00000449447 1844 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.6□□□□□ -1.99
LDB1Q86U70 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LDB1Q86U70 AC080128.1-201ENST00000474389 1917 ntBASIC2.6□□□□□ -1.99
LDB1Q86U70 Y_RNA.89-201ENST00000363031 102 ntBASIC2.59□□□□□ -1.99
LDB1Q86U70 RNU6-486P-201ENST00000363116 107 ntBASIC2.59□□□□□ -1.99
LDB1Q86U70 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
LDB1Q86U70 AL133475.1-201ENST00000404414 305 ntBASIC2.59□□□□□ -1.99
LDB1Q86U70 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.59□□□□□ -1.99
LDB1Q86U70 SNORD56-201ENST00000413522 71 ntBASIC2.59□□□□□ -1.99
LDB1Q86U70 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.59□□□□□ -1.99
LDB1Q86U70 AC074117.2-201ENST00000417130 397 ntBASIC2.59□□□□□ -1.99
LDB1Q86U70 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.59□□□□□ -1.99
LDB1Q86U70 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.59□□□□□ -1.99
LDB1Q86U70 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.59□□□□□ -1.99
LDB1Q86U70 AC011816.1-201ENST00000441346 546 ntBASIC2.59□□□□□ -1.99
LDB1Q86U70 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.59□□□□□ -1.99
LDB1Q86U70 RPL23AP45-201ENST00000476406 468 ntBASIC2.59□□□□□ -1.99
LDB1Q86U70 SRIP1-201ENST00000489235 288 ntBASIC2.59□□□□□ -1.99
LDB1Q86U70 MTCYBP40-201ENST00000509390 1135 ntBASIC2.59□□□□□ -1.99
LDB1Q86U70 TBCAP3-201ENST00000512475 312 ntBASIC2.59□□□□□ -1.99
LDB1Q86U70 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.59□□□□□ -1.99
LDB1Q86U70 SCARNA3-201ENST00000517097 143 ntBASIC2.59□□□□□ -1.99
LDB1Q86U70 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.59□□□□□ -1.99
LDB1Q86U70 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.59□□□□□ -1.99
LDB1Q86U70 MIR3117-201ENST00000584034 78 ntBASIC2.59□□□□□ -1.99
LDB1Q86U70 RPS15AP11-201ENST00000594193 385 ntBASIC2.59□□□□□ -1.99
LDB1Q86U70 AC146944.4-201ENST00000602697 718 ntBASIC2.59□□□□□ -1.99
LDB1Q86U70 AC123912.5-201ENST00000605470 343 ntBASIC2.59□□□□□ -1.99
LDB1Q86U70 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LDB1Q86U70 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.58□□□□□ -2
LDB1Q86U70 SNORA5B-201ENST00000363786 132 ntBASIC2.58□□□□□ -2
LDB1Q86U70 RNU6-877P-201ENST00000383868 107 ntBASIC2.58□□□□□ -2
LDB1Q86U70 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.58□□□□□ -2
LDB1Q86U70 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.58□□□□□ -2
LDB1Q86U70 AC097463.2-201ENST00000421074 142 ntBASIC2.58□□□□□ -2
LDB1Q86U70 BX276092.3-201ENST00000424182 230 ntBASIC2.58□□□□□ -2
LDB1Q86U70 AC092427.1-202ENST00000430569 476 ntBASIC2.58□□□□□ -2
LDB1Q86U70 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.58□□□□□ -2
LDB1Q86U70 AC112771.1-201ENST00000463581 102 ntBASIC2.58□□□□□ -2
LDB1Q86U70 AC087884.1-201ENST00000469738 328 ntBASIC2.58□□□□□ -2
LDB1Q86U70 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.58□□□□□ -2
LDB1Q86U70 RNU6-377P-201ENST00000515965 102 ntBASIC2.58□□□□□ -2
LDB1Q86U70 RNU6-718P-201ENST00000516166 105 ntBASIC2.58□□□□□ -2
LDB1Q86U70 RNU6-826P-201ENST00000516827 104 ntBASIC2.58□□□□□ -2
LDB1Q86U70 SNORA31.23-201ENST00000517219 133 ntBASIC2.58□□□□□ -2
LDB1Q86U70 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.58□□□□□ -2
LDB1Q86U70 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.58□□□□□ -2
LDB1Q86U70 AC079598.5-201ENST00000547460 117 ntBASIC2.58□□□□□ -2
LDB1Q86U70 AC090616.3-201ENST00000582184 217 ntBASIC2.58□□□□□ -2
LDB1Q86U70 MIR3199-1-201ENST00000582434 88 ntBASIC2.58□□□□□ -2
LDB1Q86U70 AP003465.2-201ENST00000602571 373 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms