Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.72□□□□□ -1.81
LIMS2Q7Z4I7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LIMS2Q7Z4I7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.72□□□□□ -1.81
LIMS2Q7Z4I7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LIMS2Q7Z4I7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
LIMS2Q7Z4I7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 AF127577.6-201ENST00000623352 2191 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 Y_RNA.16-201ENST00000362421 102 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 Y_RNA.54-201ENST00000362766 105 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 SNORA36C-201ENST00000384289 132 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 Y_RNA.581-201ENST00000391017 97 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 RNU6-882P-201ENST00000391025 103 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 RNU4-78P-201ENST00000410940 126 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 Y_RNA.793-201ENST00000411222 111 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 EI24P1-201ENST00000416584 867 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 AL451062.2-201ENST00000427515 271 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 BX679664.1-201ENST00000434429 253 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 RPL26P6-201ENST00000440913 438 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 AL513124.1-201ENST00000450410 614 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 AC079354.2-201ENST00000453523 154 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 AC087588.1-201ENST00000462203 316 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 RPS15AP34-201ENST00000487776 387 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 AC093663.1-201ENST00000497190 394 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 RNU2-27P-201ENST00000516185 142 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 IGKV2-26-201ENST00000518305 343 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 SYF2P1-201ENST00000550658 413 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 AC009318.2-201ENST00000610917 651 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 MIR376A1-201ENST00000616574 68 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 AC022149.2-201ENST00000621061 203 ntBASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LIMS2Q7Z4I7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 SNORA63.1-201ENST00000362493 131 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 RNU6-1249P-201ENST00000363237 111 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 RNU6-384P-201ENST00000364900 104 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 RNA5SP240-201ENST00000365355 128 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 Y_RNA.439-201ENST00000384119 94 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 Y_RNA.541-201ENST00000384640 113 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 MIR7-3-201ENST00000384898 110 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 EI24P2-201ENST00000397776 1076 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 MTCYBP2-201ENST00000407745 171 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 SNORD56-201ENST00000413522 71 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 RPS12P23-201ENST00000419579 400 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 RPL23AP22-201ENST00000437556 453 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 RPL29P29-201ENST00000448725 423 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 AC013470.1-201ENST00000453438 462 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 AC025518.1-201ENST00000479856 347 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 RNU2-58P-201ENST00000516403 183 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 RN7SKP234-201ENST00000517173 224 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 RNU6-1315P-201ENST00000517187 99 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 AP002770.2-201ENST00000543613 532 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 MIR4738-201ENST00000579134 87 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 AC024220.1-201ENST00000603675 484 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 AC009314.1-201ENST00000603871 304 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 AL353748.2-201ENST00000622148 471 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 U6.92-201ENST00000636464 89 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 Z99571.1-201ENST00000636677 394 ntBASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LIMS2Q7Z4I7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.69□□□□□ -1.82
LIMS2Q7Z4I7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LIMS2Q7Z4I7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LIMS2Q7Z4I7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LIMS2Q7Z4I7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
LIMS2Q7Z4I7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
LIMS2Q7Z4I7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LIMS2Q7Z4I7 RNU6-682P-201ENST00000363843 106 ntBASIC3.69□□□□□ -1.82
LIMS2Q7Z4I7 U3.13-201ENST00000364804 214 ntBASIC3.69□□□□□ -1.82
LIMS2Q7Z4I7 RNY3P4-201ENST00000384428 101 ntBASIC3.69□□□□□ -1.82
LIMS2Q7Z4I7 MIR521-1-201ENST00000384902 87 ntBASIC3.69□□□□□ -1.82
LIMS2Q7Z4I7 RPL21P75-201ENST00000396599 483 ntBASIC3.69□□□□□ -1.82
LIMS2Q7Z4I7 MIR190B-201ENST00000401119 79 ntBASIC3.69□□□□□ -1.82
LIMS2Q7Z4I7 RPL21P28-201ENST00000401418 483 ntBASIC3.69□□□□□ -1.82
LIMS2Q7Z4I7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.69□□□□□ -1.82
LIMS2Q7Z4I7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.69□□□□□ -1.82
LIMS2Q7Z4I7 AL590556.1-201ENST00000423231 483 ntBASIC3.69□□□□□ -1.82
LIMS2Q7Z4I7 AC002075.2-201ENST00000425207 252 ntBASIC3.69□□□□□ -1.82
LIMS2Q7Z4I7 AL592045.1-201ENST00000429867 352 ntBASIC3.69□□□□□ -1.82
LIMS2Q7Z4I7 AL445305.1-201ENST00000432577 575 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 245.4 ms