Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AC004520.1-201ENST00000608362 1413 ntBASIC2.65□□□□□ -1.98
NPHP3Q7Z494 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
NPHP3Q7Z494 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
NPHP3Q7Z494 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
NPHP3Q7Z494 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.65□□□□□ -1.99
NPHP3Q7Z494 RNU6-179P-201ENST00000363350 107 ntBASIC2.65□□□□□ -1.99
NPHP3Q7Z494 Y_RNA.381-201ENST00000365666 102 ntBASIC2.65□□□□□ -1.99
NPHP3Q7Z494 RNU6-658P-201ENST00000384606 106 ntBASIC2.65□□□□□ -1.99
NPHP3Q7Z494 Y_RNA.576-201ENST00000384781 102 ntBASIC2.65□□□□□ -1.99
NPHP3Q7Z494 CISD1P1-201ENST00000393907 327 ntBASIC2.65□□□□□ -1.99
NPHP3Q7Z494 AL627390.1-201ENST00000396055 340 ntBASIC2.65□□□□□ -1.99
NPHP3Q7Z494 RNU4-62P-201ENST00000410125 130 ntBASIC2.65□□□□□ -1.99
NPHP3Q7Z494 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.65□□□□□ -1.99
NPHP3Q7Z494 USP9YP27-201ENST00000418455 438 ntBASIC2.65□□□□□ -1.99
NPHP3Q7Z494 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.65□□□□□ -1.99
NPHP3Q7Z494 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.65□□□□□ -1.99
NPHP3Q7Z494 OSTCP8-201ENST00000445117 448 ntBASIC2.65□□□□□ -1.99
NPHP3Q7Z494 AC006512.1-201ENST00000468816 291 ntBASIC2.65□□□□□ -1.99
NPHP3Q7Z494 AC109927.2-201ENST00000506416 303 ntBASIC2.65□□□□□ -1.99
NPHP3Q7Z494 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.65□□□□□ -1.99
NPHP3Q7Z494 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.65□□□□□ -1.99
NPHP3Q7Z494 RNU5F-8P-201ENST00000515941 111 ntBASIC2.65□□□□□ -1.99
NPHP3Q7Z494 RNU6-143P-201ENST00000516942 93 ntBASIC2.65□□□□□ -1.99
NPHP3Q7Z494 SNORA31.18-201ENST00000517043 134 ntBASIC2.65□□□□□ -1.99
NPHP3Q7Z494 SCARNA11.3-201ENST00000517276 130 ntBASIC2.65□□□□□ -1.99
NPHP3Q7Z494 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.65□□□□□ -1.99
NPHP3Q7Z494 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.65□□□□□ -1.99
NPHP3Q7Z494 ADI1P3-201ENST00000549509 470 ntBASIC2.65□□□□□ -1.99
NPHP3Q7Z494 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.65□□□□□ -1.99
NPHP3Q7Z494 AC245505.1-201ENST00000556398 224 ntBASIC2.65□□□□□ -1.99
NPHP3Q7Z494 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.65□□□□□ -1.99
NPHP3Q7Z494 MIR5089-201ENST00000580047 84 ntBASIC2.65□□□□□ -1.99
NPHP3Q7Z494 AC126118.1-201ENST00000607744 628 ntBASIC2.65□□□□□ -1.99
NPHP3Q7Z494 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.65□□□□□ -1.99
NPHP3Q7Z494 OR5AK4P-201ENST00000635912 903 ntBASIC2.65□□□□□ -1.99
NPHP3Q7Z494 CKAP2P1-201ENST00000555477 2049 ntBASIC2.64□□□□□ -1.99
NPHP3Q7Z494 AC103710.2-202ENST00000641454 2853 ntBASIC2.64□□□□□ -1.99
NPHP3Q7Z494 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NPHP3Q7Z494 MIR9-3-201ENST00000385084 90 ntBASIC2.64□□□□□ -1.99
NPHP3Q7Z494 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.64□□□□□ -1.99
NPHP3Q7Z494 MTATP6P18-201ENST00000417994 673 ntBASIC2.64□□□□□ -1.99
NPHP3Q7Z494 MTCO2P19-201ENST00000427513 598 ntBASIC2.64□□□□□ -1.99
NPHP3Q7Z494 AC073464.1-201ENST00000429823 534 ntBASIC2.64□□□□□ -1.99
NPHP3Q7Z494 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.64□□□□□ -1.99
NPHP3Q7Z494 AC002486.1-201ENST00000435098 391 ntBASIC2.64□□□□□ -1.99
NPHP3Q7Z494 AL162395.1-201ENST00000457882 422 ntBASIC2.64□□□□□ -1.99
NPHP3Q7Z494 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.64□□□□□ -1.99
NPHP3Q7Z494 AIG1P1-201ENST00000503376 148 ntBASIC2.64□□□□□ -1.99
NPHP3Q7Z494 TRMT112P2-201ENST00000512910 132 ntBASIC2.64□□□□□ -1.99
NPHP3Q7Z494 OR4R1P-201ENST00000529879 463 ntBASIC2.64□□□□□ -1.99
NPHP3Q7Z494 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.64□□□□□ -1.99
NPHP3Q7Z494 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.64□□□□□ -1.99
NPHP3Q7Z494 AC007151.1-201ENST00000572774 483 ntBASIC2.64□□□□□ -1.99
NPHP3Q7Z494 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.64□□□□□ -1.99
NPHP3Q7Z494 DEFB131E-202ENST00000602581 683 ntBASIC2.64□□□□□ -1.99
NPHP3Q7Z494 AL136363.2-201ENST00000604173 851 ntBASIC2.64□□□□□ -1.99
NPHP3Q7Z494 AL359547.2-201ENST00000615810 418 ntBASIC2.64□□□□□ -1.99
NPHP3Q7Z494 Y_RNA.1-201ENST00000352915 104 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 MIRLET7G-201ENST00000362280 84 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 Y_RNA.40-201ENST00000362645 93 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 SNORA25.9-201ENST00000365087 128 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 SNORD115-7-201ENST00000365306 82 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 Y_RNA.409-201ENST00000383990 98 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 RNU6-1103P-201ENST00000384150 107 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 MIR454-201ENST00000390180 115 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 RNU4-55P-201ENST00000410731 137 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 AL353193.1-201ENST00000421444 268 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.63□□□□□ -1.99
NPHP3Q7Z494 DNAJC19P4-201ENST00000440115 345 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.63□□□□□ -1.99
NPHP3Q7Z494 RPS29P15-201ENST00000458329 171 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 AC104435.1-201ENST00000483483 166 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.63□□□□□ -1.99
NPHP3Q7Z494 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.63□□□□□ -1.99
NPHP3Q7Z494 AC104806.1-201ENST00000508720 308 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 AC010493.1-201ENST00000513479 292 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 SNORD27.1-201ENST00000516319 72 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 AC009902.1-201ENST00000519351 183 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 AC084851.1-201ENST00000529105 249 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 SUB1P3-201ENST00000564581 315 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.63□□□□□ -1.99
NPHP3Q7Z494 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
NPHP3Q7Z494 MIR4775-201ENST00000581168 75 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 AL158209.2-201ENST00000619266 216 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.63□□□□□ -1.99
NPHP3Q7Z494 AC084768.2-201ENST00000622736 221 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 AC011155.2-201ENST00000623202 216 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 AL359740.1-201ENST00000624340 592 ntBASIC2.63□□□□□ -1.99
NPHP3Q7Z494 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.63□□□□□ -1.99
NPHP3Q7Z494 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.63□□□□□ -1.99
NPHP3Q7Z494 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.63□□□□□ -1.99
NPHP3Q7Z494 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
NPHP3Q7Z494 ZNF680P1-201ENST00000436625 1469 ntBASIC2.62□□□□□ -1.99
NPHP3Q7Z494 MTND5P17-201ENST00000418405 1603 ntBASIC2.62□□□□□ -1.99
NPHP3Q7Z494 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
NPHP3Q7Z494 RNA5SP111-201ENST00000411386 101 ntBASIC2.62□□□□□ -1.99
NPHP3Q7Z494 AL031779.1-201ENST00000415663 330 ntBASIC2.62□□□□□ -1.99
NPHP3Q7Z494 AL160275.3-201ENST00000423876 471 ntBASIC2.62□□□□□ -1.99
NPHP3Q7Z494 MTCO3P30-201ENST00000426425 670 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms