Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 Z75741.1-201ENST00000446793 314 ntBASIC3.13□□□□□ -1.91
RNF44Q7L0R7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.13□□□□□ -1.91
RNF44Q7L0R7 AL441985.1-201ENST00000457727 251 ntBASIC3.13□□□□□ -1.91
RNF44Q7L0R7 RPS29P12-201ENST00000460178 152 ntBASIC3.13□□□□□ -1.91
RNF44Q7L0R7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.13□□□□□ -1.91
RNF44Q7L0R7 MTND4LP22-201ENST00000508209 276 ntBASIC3.13□□□□□ -1.91
RNF44Q7L0R7 MRPS36P2-201ENST00000512569 299 ntBASIC3.13□□□□□ -1.91
RNF44Q7L0R7 AP005902.1-201ENST00000521358 186 ntBASIC3.13□□□□□ -1.91
RNF44Q7L0R7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.13□□□□□ -1.91
RNF44Q7L0R7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.13□□□□□ -1.91
RNF44Q7L0R7 BNIP3P22-201ENST00000593399 556 ntBASIC3.13□□□□□ -1.91
RNF44Q7L0R7 AC008739.2-201ENST00000597006 317 ntBASIC3.13□□□□□ -1.91
RNF44Q7L0R7 AL162713.1-201ENST00000604480 262 ntBASIC3.13□□□□□ -1.91
RNF44Q7L0R7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.13□□□□□ -1.91
RNF44Q7L0R7 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.13□□□□□ -1.91
RNF44Q7L0R7 AC024581.2-201ENST00000619986 252 ntBASIC3.13□□□□□ -1.91
RNF44Q7L0R7 MTND4LP32-201ENST00000636111 270 ntBASIC3.13□□□□□ -1.91
RNF44Q7L0R7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.13□□□□□ -1.91
RNF44Q7L0R7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF44Q7L0R7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF44Q7L0R7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RNF44Q7L0R7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF44Q7L0R7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.13□□□□□ -1.91
RNF44Q7L0R7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF44Q7L0R7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RNF44Q7L0R7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RNF44Q7L0R7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RNF44Q7L0R7 RNU6-487P-201ENST00000365430 104 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 AP002088.1-201ENST00000382740 395 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 Y_RNA.535-201ENST00000384612 99 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 MIR521-1-201ENST00000384902 87 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 Z98941.1-201ENST00000407764 100 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 RNA5SP390-201ENST00000410191 113 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 Z82205.1-201ENST00000428456 297 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 AL133396.1-201ENST00000432048 687 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 DAP3P1-201ENST00000441522 278 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 RNU7-170P-201ENST00000459303 61 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 RPS29P27-201ENST00000463711 170 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 RPL31P41-201ENST00000477967 372 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 Y_RNA.670-201ENST00000516255 105 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 AC009812.2-201ENST00000517657 457 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.12□□□□□ -1.91
RNF44Q7L0R7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.12□□□□□ -1.91
RNF44Q7L0R7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.12□□□□□ -1.91
RNF44Q7L0R7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.12□□□□□ -1.91
RNF44Q7L0R7 AC011471.1-201ENST00000585766 187 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 AP001836.1-201ENST00000604675 523 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 AC018889.1-201ENST00000605372 397 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 RNU6-91P-201ENST00000607774 107 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 AC107294.3-201ENST00000609211 526 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 AC098657.3-201ENST00000620434 263 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.12□□□□□ -1.91
RNF44Q7L0R7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RNF44Q7L0R7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.12□□□□□ -1.91
RNF44Q7L0R7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RNF44Q7L0R7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.11□□□□□ -1.91
RNF44Q7L0R7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RNF44Q7L0R7 RNU6-1059P-201ENST00000363752 98 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 U8.8-201ENST00000365399 135 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF44Q7L0R7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF44Q7L0R7 SNORD116-29-201ENST00000384516 83 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 MIR544A-201ENST00000384855 91 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 Y_RNA.594-201ENST00000410373 140 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF44Q7L0R7 MTND3P9-201ENST00000429526 346 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF44Q7L0R7 SNORD19B-201ENST00000459623 84 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 AP001324.2-201ENST00000461163 319 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 AC008571.1-201ENST00000467232 300 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 AC114801.2-201ENST00000503825 781 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.11□□□□□ -1.91
RNF44Q7L0R7 Y_RNA.708-201ENST00000516950 96 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 Y_RNA.718-201ENST00000517110 102 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 CKS1BP7-201ENST00000522230 235 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.11□□□□□ -1.91
RNF44Q7L0R7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.11□□□□□ -1.91
RNF44Q7L0R7 MIR5680-201ENST00000577577 84 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 MIR5047-201ENST00000579212 100 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 AC090897.2-201ENST00000581715 130 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 MIR5690-201ENST00000583739 73 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 AC011494.1-201ENST00000596454 237 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 AP000654.2-201ENST00000605633 586 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF44Q7L0R7 AC009229.3-201ENST00000608056 282 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 MIR8076-201ENST00000611401 83 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 AC135507.2-201ENST00000612443 309 ntBASIC3.11□□□□□ -1.91
RNF44Q7L0R7 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.11□□□□□ -1.91
RNF44Q7L0R7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RNF44Q7L0R7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.11□□□□□ -1.91
RNF44Q7L0R7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF44Q7L0R7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF44Q7L0R7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RNF44Q7L0R7 AC073346.2-201ENST00000624724 2058 ntBASIC3.1□□□□□ -1.91
RNF44Q7L0R7 AC099654.7-201ENST00000635788 2127 ntBASIC3.1□□□□□ -1.91
RNF44Q7L0R7 AC006026.1-201ENST00000444025 1803 ntBASIC3.1□□□□□ -1.91
RNF44Q7L0R7 KPNA2P1-201ENST00000458289 1591 ntBASIC3.1□□□□□ -1.91
RNF44Q7L0R7 AC073544.1-201ENST00000600110 1595 ntBASIC3.1□□□□□ -1.91
RNF44Q7L0R7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RNF44Q7L0R7 Y_RNA.11-201ENST00000362375 109 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms