Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 TPRKBP2-201ENST00000565969 475 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 MIR5692A1-201ENST00000580523 69 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AC080078.2-201ENST00000603766 501 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AL021997.1-201ENST00000605757 193 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AC013562.2-201ENST00000611632 603 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 U4.5-201ENST00000617137 123 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 MIR6873-201ENST00000622788 63 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 Y_RNA.6-201ENST00000362350 114 ntBASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 Y_RNA.372-201ENST00000365599 102 ntBASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 Z98749.2-208ENST00000381646 500 ntBASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 RNU6-166P-201ENST00000384371 107 ntBASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 RNU6-780P-201ENST00000391030 104 ntBASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 AL590002.1-201ENST00000406554 418 ntBASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 RPL21P90-201ENST00000415692 466 ntBASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 AC000111.3-201ENST00000433478 193 ntBASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 HMGN2P10-201ENST00000448085 265 ntBASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 NDUFB1P2-201ENST00000449477 176 ntBASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 SNRPFP3-201ENST00000457792 225 ntBASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 LRRC34P2-201ENST00000514850 553 ntBASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 HIF1AP1-201ENST00000553642 175 ntBASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 AC021739.1-201ENST00000559631 174 ntBASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 AC025678.1-201ENST00000567861 338 ntBASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 BNIP3P30-201ENST00000601184 574 ntBASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 AC093788.1-201ENST00000609356 927 ntBASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 MTND4P14-201ENST00000435799 1354 ntBASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 Z82209.1-201ENST00000422141 2135 ntBASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.3□□□□□ -2.04
RFWD3Q6PCD5 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 AL354685.2-201ENST00000448218 1447 ntBASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 SNORA68.1-201ENST00000364537 132 ntBASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 SNORA69-201ENST00000383895 132 ntBASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 RNU6-1179P-201ENST00000384667 107 ntBASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 DPH3P2-201ENST00000422618 250 ntBASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 AL583843.1-201ENST00000456070 346 ntBASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 RPS29P21-201ENST00000496272 170 ntBASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 RNU6-1178P-201ENST00000516674 107 ntBASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 RNU6-835P-201ENST00000516974 104 ntBASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 AK6P1-201ENST00000540219 478 ntBASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 LINC00933-203ENST00000559812 219 ntBASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 MIR1273D-201ENST00000577266 86 ntBASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 AL356280.1-201ENST00000603614 379 ntBASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 MIR3199-2-201ENST00000636243 86 ntBASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
RFWD3Q6PCD5 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 ADAM3A-203ENST00000461344 2157 ntBASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 SNORD3E-201ENST00000362899 217 ntBASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 RNU6-715P-201ENST00000365204 103 ntBASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 RNU6-45P-201ENST00000384471 107 ntBASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 Y_RNA.623-201ENST00000411128 95 ntBASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 HMGB3P2-201ENST00000411913 584 ntBASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 AL353621.1-201ENST00000418219 243 ntBASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 AL669831.1-202ENST00000428504 417 ntBASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 AL627311.1-201ENST00000431514 115 ntBASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 GTF2IP13-201ENST00000438487 386 ntBASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 RNU7-180P-201ENST00000459240 63 ntBASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 MRPL42P6-201ENST00000486397 371 ntBASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 AC079804.2-201ENST00000490376 200 ntBASIC2.28□□□□□ -2.04
RFWD3Q6PCD5 HMGB1P30-201ENST00000492455 606 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms