Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC048347.1-201ENST00000624621 427 ntBASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 AC068254.2-201ENST00000623938 3577 ntBASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 AL359854.1-201ENST00000614203 1594 ntBASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 UBE3AP2-201ENST00000429033 2259 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-37P-201ENST00000362692 107 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 Y_RNA.76-201ENST00000362931 109 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-11P-201ENST00000364234 107 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-7-201ENST00000364784 107 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-8-201ENST00000365467 107 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-25P-201ENST00000383873 107 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-1-201ENST00000383898 107 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-36P-201ENST00000384172 107 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-4P-201ENST00000384205 107 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-5P-201ENST00000384238 107 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-3P-201ENST00000384314 107 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-16P-201ENST00000384385 107 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-15P-201ENST00000384534 107 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-2-201ENST00000384627 107 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-29P-201ENST00000384637 107 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-9-201ENST00000384776 107 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 Y_RNA.581-201ENST00000391017 97 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 RNU2-20P-201ENST00000410425 191 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 RNU2-37P-201ENST00000410695 177 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 COX6CP10-201ENST00000416832 224 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 AL096701.2-201ENST00000416920 238 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 EIF1P2-201ENST00000428233 350 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 APOOP4-201ENST00000513530 597 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 SERF1AP1-201ENST00000514575 187 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 MIR892C-201ENST00000516410 77 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 SNORA25.14-201ENST00000516481 132 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 SNORA70.18-201ENST00000516696 98 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 RNA5SP468-201ENST00000516782 93 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 RN7SKP289-201ENST00000517244 295 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 AP002392.1-201ENST00000537692 208 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 AP002770.2-201ENST00000543613 532 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 AC008011.1-201ENST00000545989 227 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 AC093023.1-201ENST00000547375 507 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 TRAV37-201ENST00000553906 342 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 MTND6P33-201ENST00000571794 183 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 AC025946.2-201ENST00000603398 234 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 AC009314.1-201ENST00000603871 304 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-6P-201ENST00000606623 107 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 AC009318.2-201ENST00000610917 651 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 AL079305.1-201ENST00000623159 3008 ntBASIC3.95□□□□□ -1.78
CNKSR3Q6P9H4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 AC011266.1-201ENST00000624119 3569 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 IPO8P1-201ENST00000455509 3109 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-384P-201ENST00000364900 104 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 U3.19-201ENST00000390893 196 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 RPL21P75-201ENST00000396599 483 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 RPL21P28-201ENST00000401418 483 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 AL590556.1-201ENST00000423231 483 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 AC005300.1-201ENST00000428401 373 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 AC087650.1-201ENST00000431445 468 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 AC079354.2-201ENST00000453523 154 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 RPL21P39-201ENST00000463605 483 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 HSPE1P6-201ENST00000479457 291 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 AC132942.1-201ENST00000486753 483 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 RPS15AP34-201ENST00000487776 387 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 AC093591.1-201ENST00000491435 481 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 RPL21P16-201ENST00000495531 483 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 AC024405.2-202ENST00000532731 184 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 BDH2P1-201ENST00000602288 736 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 MIR8076-201ENST00000611401 83 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms