Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC009238.1-201ENST00000442165 424 ntBASIC2.03□□□□□ -2.08
ATL3Q6DD88 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.03□□□□□ -2.08
ATL3Q6DD88 AC009237.6-201ENST00000446969 424 ntBASIC2.03□□□□□ -2.08
ATL3Q6DD88 AL360271.2-201ENST00000447710 161 ntBASIC2.03□□□□□ -2.08
ATL3Q6DD88 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.03□□□□□ -2.08
ATL3Q6DD88 SNRPGP9-201ENST00000456025 225 ntBASIC2.03□□□□□ -2.08
ATL3Q6DD88 PMCHL2-203ENST00000457791 237 ntBASIC2.03□□□□□ -2.08
ATL3Q6DD88 UBL5P3-201ENST00000475112 231 ntBASIC2.03□□□□□ -2.08
ATL3Q6DD88 RPL21P99-201ENST00000480369 423 ntBASIC2.03□□□□□ -2.08
ATL3Q6DD88 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.03□□□□□ -2.08
ATL3Q6DD88 AC116562.3-201ENST00000506136 177 ntBASIC2.03□□□□□ -2.08
ATL3Q6DD88 AC068587.5-201ENST00000528506 175 ntBASIC2.03□□□□□ -2.08
ATL3Q6DD88 CBX3P7-201ENST00000532876 502 ntBASIC2.03□□□□□ -2.08
ATL3Q6DD88 CR383656.8-201ENST00000549046 145 ntBASIC2.03□□□□□ -2.08
ATL3Q6DD88 MIR3126-201ENST00000577443 74 ntBASIC2.03□□□□□ -2.08
ATL3Q6DD88 MIR4648-201ENST00000580107 72 ntBASIC2.03□□□□□ -2.08
ATL3Q6DD88 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.03□□□□□ -2.08
ATL3Q6DD88 AC012493.3-201ENST00000604494 112 ntBASIC2.03□□□□□ -2.08
ATL3Q6DD88 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.03□□□□□ -2.08
ATL3Q6DD88 MTND5P17-201ENST00000418405 1603 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 SNORD14B-201ENST00000364533 90 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 SNORD115-7-201ENST00000365306 82 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 RNU6-641P-201ENST00000384006 107 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 SNORA70B-201ENST00000384210 135 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 RNU6-72P-201ENST00000384285 79 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 Y_RNA.576-201ENST00000384781 102 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 MIR561-201ENST00000385216 97 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 AL079342.1-201ENST00000401460 267 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 AL133475.1-201ENST00000404414 305 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.02□□□□□ -2.09
ATL3Q6DD88 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.02□□□□□ -2.09
ATL3Q6DD88 AIMP1P2-201ENST00000425294 312 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.02□□□□□ -2.09
ATL3Q6DD88 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.02□□□□□ -2.09
ATL3Q6DD88 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.02□□□□□ -2.09
ATL3Q6DD88 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.02□□□□□ -2.09
ATL3Q6DD88 AC098862.1-201ENST00000504991 413 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 MRPS17P9-201ENST00000511924 393 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 RNA5SP137-201ENST00000516833 135 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 SNORA31.25-201ENST00000517242 134 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 RNU2-19P-201ENST00000517288 84 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.02□□□□□ -2.09
ATL3Q6DD88 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.02□□□□□ -2.09
ATL3Q6DD88 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.02□□□□□ -2.09
ATL3Q6DD88 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.02□□□□□ -2.09
ATL3Q6DD88 MIR4529-201ENST00000578110 78 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 MIR3945-201ENST00000581853 98 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 MIR548AC-201ENST00000585049 88 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 AC064872.1-201ENST00000604823 1072 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 AC138649.3-201ENST00000622154 254 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 AC092656.1-203ENST00000624134 423 ntBASIC2.02□□□□□ -2.09
ATL3Q6DD88 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ATL3Q6DD88 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ATL3Q6DD88 SNORD116-8-201ENST00000384365 95 ntBASIC2.01□□□□□ -2.09
ATL3Q6DD88 RNU6-843P-201ENST00000384454 104 ntBASIC2.01□□□□□ -2.09
ATL3Q6DD88 SNORA40.19-201ENST00000390846 128 ntBASIC2.01□□□□□ -2.09
ATL3Q6DD88 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.01□□□□□ -2.09
ATL3Q6DD88 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.01□□□□□ -2.09
ATL3Q6DD88 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.01□□□□□ -2.09
ATL3Q6DD88 MTCO3P5-201ENST00000433620 714 ntBASIC2.01□□□□□ -2.09
ATL3Q6DD88 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.01□□□□□ -2.09
ATL3Q6DD88 snoU109.2-201ENST00000459316 135 ntBASIC2.01□□□□□ -2.09
ATL3Q6DD88 SNORA48.11-201ENST00000517015 89 ntBASIC2.01□□□□□ -2.09
ATL3Q6DD88 AC104581.2-201ENST00000572227 430 ntBASIC2.01□□□□□ -2.09
ATL3Q6DD88 MIR4775-201ENST00000581168 75 ntBASIC2.01□□□□□ -2.09
ATL3Q6DD88 CLIC4P2-201ENST00000601934 717 ntBASIC2.01□□□□□ -2.09
ATL3Q6DD88 U6.42-201ENST00000618440 107 ntBASIC2.01□□□□□ -2.09
ATL3Q6DD88 AC011155.2-201ENST00000623202 216 ntBASIC2.01□□□□□ -2.09
ATL3Q6DD88 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.01□□□□□ -2.09
ATL3Q6DD88 AC110994.2-201ENST00000635481 492 ntBASIC2.01□□□□□ -2.09
ATL3Q6DD88 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
ATL3Q6DD88 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
ATL3Q6DD88 RNU6-179P-201ENST00000363350 107 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 RNU6-108P-201ENST00000365558 107 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 MIR1261-201ENST00000408659 82 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 RNU6-387P-201ENST00000411331 105 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2□□□□□ -2.09
ATL3Q6DD88 AL445685.2-201ENST00000422551 342 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 RPL7P54-201ENST00000438336 674 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2□□□□□ -2.09
ATL3Q6DD88 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2□□□□□ -2.09
ATL3Q6DD88 AC112771.1-201ENST00000463581 102 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 BET1P1-201ENST00000482276 359 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 RPS29P11-201ENST00000496507 171 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 SNORA25.11-201ENST00000515935 105 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 RNU1-86P-201ENST00000516108 154 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 SNORD27.1-201ENST00000516319 72 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 RNU1-107P-201ENST00000516617 154 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 AC109329.1-201ENST00000518744 317 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2□□□□□ -2.09
ATL3Q6DD88 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2□□□□□ -2.09
ATL3Q6DD88 AC091544.4-201ENST00000555268 342 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 AC110588.1-201ENST00000559699 137 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2□□□□□ -2.09
ATL3Q6DD88 MIR3122-201ENST00000577243 73 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 AC098848.2-201ENST00000588023 330 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 AL359740.1-201ENST00000624340 592 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 AC008555.8-201ENST00000623602 2168 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms