Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 RNU6-911P-201ENST00000516523 104 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 AC006077.1-201ENST00000604746 343 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 AL731566.2-201ENST00000618971 317 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
E4F1Q66K89 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
E4F1Q66K89 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.87□□□□□ -1.79
E4F1Q66K89 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
E4F1Q66K89 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
E4F1Q66K89 Y_RNA.26-201ENST00000362539 101 ntBASIC3.87□□□□□ -1.79
E4F1Q66K89 Y_RNA.358-201ENST00000365491 99 ntBASIC3.87□□□□□ -1.79
E4F1Q66K89 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.87□□□□□ -1.79
E4F1Q66K89 MIR518D-201ENST00000385014 87 ntBASIC3.87□□□□□ -1.79
E4F1Q66K89 SNORA12.2-201ENST00000391040 156 ntBASIC3.87□□□□□ -1.79
E4F1Q66K89 MIR190B-201ENST00000401119 79 ntBASIC3.87□□□□□ -1.79
E4F1Q66K89 MIR1302-6-201ENST00000408466 90 ntBASIC3.87□□□□□ -1.79
E4F1Q66K89 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.87□□□□□ -1.79
E4F1Q66K89 DBIP2-201ENST00000419076 262 ntBASIC3.87□□□□□ -1.79
E4F1Q66K89 C4BPAP2-201ENST00000428434 478 ntBASIC3.87□□□□□ -1.79
E4F1Q66K89 AL591043.1-201ENST00000432461 424 ntBASIC3.87□□□□□ -1.79
E4F1Q66K89 AC098831.1-201ENST00000440661 216 ntBASIC3.87□□□□□ -1.79
E4F1Q66K89 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.87□□□□□ -1.79
E4F1Q66K89 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.87□□□□□ -1.79
E4F1Q66K89 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.87□□□□□ -1.79
E4F1Q66K89 AC026402.1-201ENST00000513642 170 ntBASIC3.87□□□□□ -1.79
E4F1Q66K89 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.87□□□□□ -1.79
E4F1Q66K89 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.87□□□□□ -1.79
E4F1Q66K89 RNU6-928P-201ENST00000516876 104 ntBASIC3.87□□□□□ -1.79
E4F1Q66K89 Y_RNA.706-201ENST00000516933 99 ntBASIC3.87□□□□□ -1.79
E4F1Q66K89 RN7SKP272-201ENST00000516988 232 ntBASIC3.87□□□□□ -1.79
E4F1Q66K89 AC091144.1-201ENST00000519573 138 ntBASIC3.87□□□□□ -1.79
E4F1Q66K89 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.87□□□□□ -1.79
E4F1Q66K89 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.87□□□□□ -1.79
E4F1Q66K89 AC024153.1-201ENST00000603103 365 ntBASIC3.87□□□□□ -1.79
E4F1Q66K89 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.87□□□□□ -1.79
E4F1Q66K89 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.87□□□□□ -1.79
E4F1Q66K89 AC241585.2-209ENST00000638217 143 ntBASIC3.87□□□□□ -1.79
E4F1Q66K89 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
E4F1Q66K89 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.87□□□□□ -1.79
E4F1Q66K89 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
E4F1Q66K89 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
E4F1Q66K89 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
E4F1Q66K89 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
E4F1Q66K89 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
E4F1Q66K89 SRP72P2-201ENST00000344851 1979 ntBASIC3.86□□□□□ -1.79
E4F1Q66K89 AC233263.6-201ENST00000631132 1963 ntBASIC3.86□□□□□ -1.79
E4F1Q66K89 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
E4F1Q66K89 Y_RNA.19-201ENST00000362462 99 ntBASIC3.86□□□□□ -1.79
E4F1Q66K89 RNU6-379P-201ENST00000363813 104 ntBASIC3.86□□□□□ -1.79
E4F1Q66K89 Y_RNA.276-201ENST00000364732 109 ntBASIC3.86□□□□□ -1.79
E4F1Q66K89 SNORA62-201ENST00000365493 153 ntBASIC3.86□□□□□ -1.79
E4F1Q66K89 MTCYBP2-201ENST00000407745 171 ntBASIC3.86□□□□□ -1.79
E4F1Q66K89 AP000275.1-201ENST00000411943 390 ntBASIC3.86□□□□□ -1.79
E4F1Q66K89 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.86□□□□□ -1.79
E4F1Q66K89 RPS29P7-201ENST00000439662 171 ntBASIC3.86□□□□□ -1.79
E4F1Q66K89 RNU7-175P-201ENST00000515915 61 ntBASIC3.86□□□□□ -1.79
E4F1Q66K89 RNU6-388P-201ENST00000517012 105 ntBASIC3.86□□□□□ -1.79
E4F1Q66K89 RNU6-389P-201ENST00000517048 105 ntBASIC3.86□□□□□ -1.79
E4F1Q66K89 RNU6-897P-201ENST00000517135 105 ntBASIC3.86□□□□□ -1.79
E4F1Q66K89 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.86□□□□□ -1.79
E4F1Q66K89 AC104027.1-201ENST00000521887 300 ntBASIC3.86□□□□□ -1.79
E4F1Q66K89 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.86□□□□□ -1.79
E4F1Q66K89 MIR5187-201ENST00000583479 76 ntBASIC3.86□□□□□ -1.79
E4F1Q66K89 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.86□□□□□ -1.79
E4F1Q66K89 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.86□□□□□ -1.79
E4F1Q66K89 MIR7153-201ENST00000637758 57 ntBASIC3.86□□□□□ -1.79
E4F1Q66K89 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.86□□□□□ -1.79
E4F1Q66K89 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
E4F1Q66K89 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
E4F1Q66K89 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.85□□□□□ -1.79
E4F1Q66K89 Z75746.1-201ENST00000440243 2080 ntBASIC3.85□□□□□ -1.79
E4F1Q66K89 AC233981.2-201ENST00000611524 1614 ntBASIC3.85□□□□□ -1.79
E4F1Q66K89 OR56A5-201ENST00000340110 738 ntBASIC3.85□□□□□ -1.79
E4F1Q66K89 RNU6-770P-201ENST00000363929 105 ntBASIC3.85□□□□□ -1.79
E4F1Q66K89 RNU6-472P-201ENST00000384299 107 ntBASIC3.85□□□□□ -1.79
E4F1Q66K89 SNORD116-20-201ENST00000384529 92 ntBASIC3.85□□□□□ -1.79
E4F1Q66K89 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
E4F1Q66K89 RNA5SP44-201ENST00000410446 133 ntBASIC3.85□□□□□ -1.79
E4F1Q66K89 RNU6-1245P-201ENST00000411130 106 ntBASIC3.85□□□□□ -1.79
E4F1Q66K89 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.85□□□□□ -1.79
E4F1Q66K89 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.85□□□□□ -1.79
E4F1Q66K89 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
E4F1Q66K89 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.85□□□□□ -1.79
E4F1Q66K89 AL357552.1-201ENST00000445254 415 ntBASIC3.85□□□□□ -1.79
E4F1Q66K89 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.85□□□□□ -1.79
E4F1Q66K89 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.85□□□□□ -1.79
E4F1Q66K89 TOMM22P6-201ENST00000465035 409 ntBASIC3.85□□□□□ -1.79
E4F1Q66K89 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.85□□□□□ -1.79
E4F1Q66K89 AC074250.1-201ENST00000511117 192 ntBASIC3.85□□□□□ -1.79
E4F1Q66K89 RNA5SP309-201ENST00000516670 106 ntBASIC3.85□□□□□ -1.79
E4F1Q66K89 SNORA70.18-201ENST00000516696 98 ntBASIC3.85□□□□□ -1.79
E4F1Q66K89 IGKV2D-19-201ENST00000523346 262 ntBASIC3.85□□□□□ -1.79
E4F1Q66K89 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
E4F1Q66K89 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.85□□□□□ -1.79
E4F1Q66K89 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.85□□□□□ -1.79
E4F1Q66K89 AC060766.3-201ENST00000591442 263 ntBASIC3.85□□□□□ -1.79
E4F1Q66K89 AC130454.1-201ENST00000622948 401 ntBASIC3.85□□□□□ -1.79
E4F1Q66K89 AP000560.1-201ENST00000624150 1937 ntBASIC3.85□□□□□ -1.79
E4F1Q66K89 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
E4F1Q66K89 AL672296.1-201ENST00000427780 2158 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms