Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNF220Q5VTB9 AL049781.1-201ENST00000623195 3585 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 AC092435.3-201ENST00000565538 3654 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 RNU6-1010P-201ENST00000362757 107 ntBASIC3.19□□□□□ -1.9
RNF220Q5VTB9 Y_RNA.61-201ENST00000362835 102 ntBASIC3.19□□□□□ -1.9
RNF220Q5VTB9 SNORA68.1-201ENST00000364537 132 ntBASIC3.19□□□□□ -1.9
RNF220Q5VTB9 U8.8-201ENST00000365399 135 ntBASIC3.19□□□□□ -1.9
RNF220Q5VTB9 BMS1P22-201ENST00000414726 313 ntBASIC3.19□□□□□ -1.9
RNF220Q5VTB9 DBIP2-201ENST00000419076 262 ntBASIC3.19□□□□□ -1.9
RNF220Q5VTB9 MTND3P23-201ENST00000431980 347 ntBASIC3.19□□□□□ -1.9
RNF220Q5VTB9 AL133396.1-201ENST00000432048 687 ntBASIC3.19□□□□□ -1.9
RNF220Q5VTB9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.19□□□□□ -1.9
RNF220Q5VTB9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.19□□□□□ -1.9
RNF220Q5VTB9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.19□□□□□ -1.9
RNF220Q5VTB9 RPS29P27-201ENST00000463711 170 ntBASIC3.19□□□□□ -1.9
RNF220Q5VTB9 RPL30P12-201ENST00000474666 353 ntBASIC3.19□□□□□ -1.9
RNF220Q5VTB9 RNA5SP217-201ENST00000515959 91 ntBASIC3.19□□□□□ -1.9
RNF220Q5VTB9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.19□□□□□ -1.9
RNF220Q5VTB9 HPRT1P3-201ENST00000539521 576 ntBASIC3.19□□□□□ -1.9
RNF220Q5VTB9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.19□□□□□ -1.9
RNF220Q5VTB9 AC078795.3-201ENST00000602913 472 ntBASIC3.19□□□□□ -1.9
RNF220Q5VTB9 AL627309.6-201ENST00000606857 840 ntBASIC3.19□□□□□ -1.9
RNF220Q5VTB9 AL359757.2-201ENST00000624309 274 ntBASIC3.19□□□□□ -1.9
RNF220Q5VTB9 AC002543.1-201ENST00000299783 1954 ntBASIC3.19□□□□□ -1.9
RNF220Q5VTB9 AL353743.1-202ENST00000431724 1695 ntBASIC3.18□□□□□ -1.9
RNF220Q5VTB9 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RNF220Q5VTB9 RNU6-1297P-201ENST00000384415 104 ntBASIC3.18□□□□□ -1.9
RNF220Q5VTB9 SNORA46-201ENST00000384762 135 ntBASIC3.18□□□□□ -1.9
RNF220Q5VTB9 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RNF220Q5VTB9 RNA5SP44-201ENST00000410446 133 ntBASIC3.18□□□□□ -1.9
RNF220Q5VTB9 RNU6-1140P-201ENST00000410517 106 ntBASIC3.18□□□□□ -1.9
RNF220Q5VTB9 Z82205.1-201ENST00000428456 297 ntBASIC3.18□□□□□ -1.9
RNF220Q5VTB9 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.18□□□□□ -1.9
RNF220Q5VTB9 USP9YP30-201ENST00000430729 455 ntBASIC3.18□□□□□ -1.9
RNF220Q5VTB9 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF220Q5VTB9 FTH1P25-201ENST00000447665 469 ntBASIC3.18□□□□□ -1.9
RNF220Q5VTB9 AC112771.1-201ENST00000463581 102 ntBASIC3.18□□□□□ -1.9
RNF220Q5VTB9 AC026782.1-201ENST00000512952 449 ntBASIC3.18□□□□□ -1.9
RNF220Q5VTB9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.18□□□□□ -1.9
RNF220Q5VTB9 Y_RNA.708-201ENST00000516950 96 ntBASIC3.18□□□□□ -1.9
RNF220Q5VTB9 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.18□□□□□ -1.9
RNF220Q5VTB9 AC093027.1-201ENST00000546698 429 ntBASIC3.18□□□□□ -1.9
RNF220Q5VTB9 AC079598.5-201ENST00000547460 117 ntBASIC3.18□□□□□ -1.9
RNF220Q5VTB9 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.18□□□□□ -1.9
RNF220Q5VTB9 FRG2DP-202ENST00000566967 323 ntBASIC3.18□□□□□ -1.9
RNF220Q5VTB9 MIR5690-201ENST00000583739 73 ntBASIC3.18□□□□□ -1.9
RNF220Q5VTB9 AL020997.2-201ENST00000602607 184 ntBASIC3.18□□□□□ -1.9
RNF220Q5VTB9 PISRT1.1-201ENST00000616930 107 ntBASIC3.18□□□□□ -1.9
RNF220Q5VTB9 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.18□□□□□ -1.9
RNF220Q5VTB9 U4.6-201ENST00000621618 127 ntBASIC3.18□□□□□ -1.9
RNF220Q5VTB9 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF220Q5VTB9 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RNF220Q5VTB9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RNF220Q5VTB9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RNF220Q5VTB9 AC017071.1-201ENST00000564407 2204 ntBASIC3.17□□□□□ -1.9
RNF220Q5VTB9 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
RNF220Q5VTB9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF220Q5VTB9 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.17□□□□□ -1.9
RNF220Q5VTB9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF220Q5VTB9 Y_RNA.67-201ENST00000362870 100 ntBASIC3.17□□□□□ -1.9
RNF220Q5VTB9 RNU6-1141P-201ENST00000364520 107 ntBASIC3.17□□□□□ -1.9
RNF220Q5VTB9 RNU6-596P-201ENST00000365395 98 ntBASIC3.17□□□□□ -1.9
RNF220Q5VTB9 RNU6-43P-201ENST00000384302 107 ntBASIC3.17□□□□□ -1.9
RNF220Q5VTB9 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.17□□□□□ -1.9
RNF220Q5VTB9 RNU6-1050P-201ENST00000410388 107 ntBASIC3.17□□□□□ -1.9
RNF220Q5VTB9 RNU2-23P-201ENST00000410545 195 ntBASIC3.17□□□□□ -1.9
RNF220Q5VTB9 RNU6-370P-201ENST00000411008 104 ntBASIC3.17□□□□□ -1.9
RNF220Q5VTB9 CYCSP19-201ENST00000411715 316 ntBASIC3.17□□□□□ -1.9
RNF220Q5VTB9 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF220Q5VTB9 AC097463.2-201ENST00000421074 142 ntBASIC3.17□□□□□ -1.9
RNF220Q5VTB9 AL445584.1-201ENST00000431451 330 ntBASIC3.17□□□□□ -1.9
RNF220Q5VTB9 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF220Q5VTB9 AL031659.1-201ENST00000447075 539 ntBASIC3.17□□□□□ -1.9
RNF220Q5VTB9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.17□□□□□ -1.9
RNF220Q5VTB9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF220Q5VTB9 RNA5SP112-201ENST00000515937 99 ntBASIC3.17□□□□□ -1.9
RNF220Q5VTB9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF220Q5VTB9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.17□□□□□ -1.9
RNF220Q5VTB9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.17□□□□□ -1.9
RNF220Q5VTB9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF220Q5VTB9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF220Q5VTB9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.17□□□□□ -1.9
RNF220Q5VTB9 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.17□□□□□ -1.9
RNF220Q5VTB9 AC006557.5-201ENST00000603126 811 ntBASIC3.17□□□□□ -1.9
RNF220Q5VTB9 AL137843.1-201ENST00000605078 385 ntBASIC3.17□□□□□ -1.9
RNF220Q5VTB9 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.17□□□□□ -1.9
RNF220Q5VTB9 AC098657.3-201ENST00000620434 263 ntBASIC3.17□□□□□ -1.9
RNF220Q5VTB9 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF220Q5VTB9 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF220Q5VTB9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF220Q5VTB9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
RNF220Q5VTB9 AC009541.1-201ENST00000438279 2662 ntBASIC3.16□□□□□ -1.9
RNF220Q5VTB9 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.16□□□□□ -1.9
RNF220Q5VTB9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RNF220Q5VTB9 RNU4-79P-201ENST00000362764 141 ntBASIC3.16□□□□□ -1.9
RNF220Q5VTB9 SNORD32A-201ENST00000364805 84 ntBASIC3.16□□□□□ -1.9
RNF220Q5VTB9 MIR1193-201ENST00000408109 78 ntBASIC3.16□□□□□ -1.9
RNF220Q5VTB9 Y_RNA.594-201ENST00000410373 140 ntBASIC3.16□□□□□ -1.9
RNF220Q5VTB9 RPL32P35-201ENST00000415214 394 ntBASIC3.16□□□□□ -1.9
RNF220Q5VTB9 AL139281.1-201ENST00000422120 335 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms