Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 RNA5SP269-201ENST00000459032 137 ntBASIC0.31□□□□□ -2.36
NUP188Q5SRE5 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.31□□□□□ -2.36
NUP188Q5SRE5 RNU6-678P-201ENST00000516832 109 ntBASIC0.31□□□□□ -2.36
NUP188Q5SRE5 RNU6-889P-201ENST00000517189 103 ntBASIC0.31□□□□□ -2.36
NUP188Q5SRE5 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.31□□□□□ -2.36
NUP188Q5SRE5 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.31□□□□□ -2.36
NUP188Q5SRE5 VN1R82P-201ENST00000601481 356 ntBASIC0.31□□□□□ -2.36
NUP188Q5SRE5 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.31□□□□□ -2.36
NUP188Q5SRE5 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.3□□□□□ -2.36
NUP188Q5SRE5 RNU6-543P-201ENST00000362576 108 ntBASIC0.3□□□□□ -2.36
NUP188Q5SRE5 AL356776.1-201ENST00000406574 447 ntBASIC0.3□□□□□ -2.36
NUP188Q5SRE5 AC007435.1-201ENST00000421086 415 ntBASIC0.3□□□□□ -2.36
NUP188Q5SRE5 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.3□□□□□ -2.36
NUP188Q5SRE5 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.3□□□□□ -2.36
NUP188Q5SRE5 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.3□□□□□ -2.36
NUP188Q5SRE5 AP001324.2-201ENST00000461163 319 ntBASIC0.3□□□□□ -2.36
NUP188Q5SRE5 RNU6-581P-201ENST00000516214 105 ntBASIC0.3□□□□□ -2.36
NUP188Q5SRE5 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.3□□□□□ -2.36
NUP188Q5SRE5 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.3□□□□□ -2.36
NUP188Q5SRE5 AP001429.1-201ENST00000602568 530 ntBASIC0.3□□□□□ -2.36
NUP188Q5SRE5 AC239868.4-201ENST00000608318 671 ntBASIC0.3□□□□□ -2.36
NUP188Q5SRE5 AL138726.1-201ENST00000614873 333 ntBASIC0.3□□□□□ -2.36
NUP188Q5SRE5 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.3□□□□□ -2.36
NUP188Q5SRE5 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.3□□□□□ -2.36
NUP188Q5SRE5 MIR525-201ENST00000384978 85 ntBASIC0.3□□□□□ -2.36
NUP188Q5SRE5 MTCYBP38-201ENST00000417160 1123 ntBASIC0.3□□□□□ -2.36
NUP188Q5SRE5 MTND4P6-201ENST00000438297 472 ntBASIC0.3□□□□□ -2.36
NUP188Q5SRE5 RPL26P26-201ENST00000480251 434 ntBASIC0.3□□□□□ -2.36
NUP188Q5SRE5 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.3□□□□□ -2.36
NUP188Q5SRE5 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.3□□□□□ -2.36
NUP188Q5SRE5 RNU4-54P-201ENST00000516428 129 ntBASIC0.3□□□□□ -2.36
NUP188Q5SRE5 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.3□□□□□ -2.36
NUP188Q5SRE5 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.3□□□□□ -2.36
NUP188Q5SRE5 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.3□□□□□ -2.36
NUP188Q5SRE5 AC119674.1-220ENST00000641502 1048 ntBASIC0.3□□□□□ -2.36
NUP188Q5SRE5 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.29□□□□□ -2.36
NUP188Q5SRE5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
NUP188Q5SRE5 RNU6-1280P-201ENST00000365211 107 ntBASIC0.29□□□□□ -2.36
NUP188Q5SRE5 RNU6-546P-201ENST00000383991 107 ntBASIC0.29□□□□□ -2.36
NUP188Q5SRE5 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
NUP188Q5SRE5 AC092634.6-201ENST00000418558 192 ntBASIC0.29□□□□□ -2.36
NUP188Q5SRE5 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.29□□□□□ -2.36
NUP188Q5SRE5 FAM204CP-201ENST00000424489 642 ntBASIC0.29□□□□□ -2.36
NUP188Q5SRE5 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.29□□□□□ -2.36
NUP188Q5SRE5 MTND1P16-201ENST00000465177 898 ntBASIC0.29□□□□□ -2.36
NUP188Q5SRE5 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.29□□□□□ -2.36
NUP188Q5SRE5 AC109329.1-201ENST00000518744 317 ntBASIC0.29□□□□□ -2.36
NUP188Q5SRE5 AC018659.1-201ENST00000551083 169 ntBASIC0.29□□□□□ -2.36
NUP188Q5SRE5 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.29□□□□□ -2.36
NUP188Q5SRE5 MIR4305-201ENST00000583252 102 ntBASIC0.29□□□□□ -2.36
NUP188Q5SRE5 BNIP3P27-201ENST00000599991 412 ntBASIC0.29□□□□□ -2.36
NUP188Q5SRE5 AC068790.6-201ENST00000602558 258 ntBASIC0.29□□□□□ -2.36
NUP188Q5SRE5 NDUFA8P1-201ENST00000605525 367 ntBASIC0.29□□□□□ -2.36
NUP188Q5SRE5 RNU6-91P-201ENST00000607774 107 ntBASIC0.29□□□□□ -2.36
NUP188Q5SRE5 AL132822.1-201ENST00000617063 513 ntBASIC0.29□□□□□ -2.36
NUP188Q5SRE5 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
NUP188Q5SRE5 ENSAP3-201ENST00000312710 333 ntBASIC0.28□□□□□ -2.36
NUP188Q5SRE5 Y_RNA.170-201ENST00000363746 110 ntBASIC0.28□□□□□ -2.36
NUP188Q5SRE5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
NUP188Q5SRE5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
NUP188Q5SRE5 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.28□□□□□ -2.36
NUP188Q5SRE5 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.28□□□□□ -2.36
NUP188Q5SRE5 AC005345.1-201ENST00000431868 217 ntBASIC0.28□□□□□ -2.36
NUP188Q5SRE5 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.28□□□□□ -2.36
NUP188Q5SRE5 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.28□□□□□ -2.36
NUP188Q5SRE5 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.28□□□□□ -2.36
NUP188Q5SRE5 RNA5SP290-201ENST00000517133 127 ntBASIC0.28□□□□□ -2.36
NUP188Q5SRE5 AC090142.3-201ENST00000519012 385 ntBASIC0.28□□□□□ -2.36
NUP188Q5SRE5 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.28□□□□□ -2.36
NUP188Q5SRE5 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.28□□□□□ -2.36
NUP188Q5SRE5 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.28□□□□□ -2.36
NUP188Q5SRE5 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.28□□□□□ -2.36
NUP188Q5SRE5 RNU6-611P-201ENST00000384276 104 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 MIR597-201ENST00000384968 97 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.27□□□□□ -2.37
NUP188Q5SRE5 SKA2P1-201ENST00000425592 390 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 MTCO3P17-201ENST00000443775 513 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 AL358794.1-201ENST00000445689 381 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 RNVU1-2-201ENST00000516326 135 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 RNU6-667P-201ENST00000517186 102 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.27□□□□□ -2.37
NUP188Q5SRE5 AC090578.1-201ENST00000604955 591 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 AL583856.2-201ENST00000606298 543 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 AC013476.2-201ENST00000614456 459 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 SNORD114-24-201ENST00000365029 72 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.27□□□□□ -2.37
NUP188Q5SRE5 AL592310.1-201ENST00000414330 671 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 PPP1R11P2-201ENST00000423543 382 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 TIMM9P1-201ENST00000436122 256 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 UBE2V1P8-201ENST00000437166 265 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 AC002381.1-201ENST00000447049 280 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 AC067940.1-201ENST00000458411 300 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.27□□□□□ -2.37
NUP188Q5SRE5 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.27□□□□□ -2.37
NUP188Q5SRE5 CLIC4P2-201ENST00000601934 717 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 AP003465.2-201ENST00000602571 373 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.27□□□□□ -2.37
NUP188Q5SRE5 AC017037.3-201ENST00000625016 472 ntBASIC0.27□□□□□ -2.37
NUP188Q5SRE5 SNORD114-6-201ENST00000364393 72 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms