Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 MIR1273E-201ENST00000581165 102 ntBASIC7.3□□□□□ -1.24
NCBP3Q53F19 MIR7853-201ENST00000584820 132 ntBASIC7.3□□□□□ -1.24
NCBP3Q53F19 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC7.3□□□□□ -1.24
NCBP3Q53F19 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.3□□□□□ -1.24
NCBP3Q53F19 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
NCBP3Q53F19 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NCBP3Q53F19 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC7.3□□□□□ -1.24
NCBP3Q53F19 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC7.3□□□□□ -1.24
NCBP3Q53F19 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
NCBP3Q53F19 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NCBP3Q53F19 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NCBP3Q53F19 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
NCBP3Q53F19 AC068254.2-201ENST00000623938 3577 ntBASIC7.29□□□□□ -1.24
NCBP3Q53F19 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
NCBP3Q53F19 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
NCBP3Q53F19 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
NCBP3Q53F19 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NCBP3Q53F19 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NCBP3Q53F19 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NCBP3Q53F19 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC7.29□□□□□ -1.24
NCBP3Q53F19 SNORA51.1-201ENST00000363243 140 ntBASIC7.29□□□□□ -1.24
NCBP3Q53F19 SNORD61-201ENST00000384252 73 ntBASIC7.29□□□□□ -1.24
NCBP3Q53F19 MT-TI-201ENST00000387365 69 ntBASIC7.29□□□□□ -1.24
NCBP3Q53F19 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
NCBP3Q53F19 AL500522.2-201ENST00000448562 343 ntBASIC7.29□□□□□ -1.24
NCBP3Q53F19 AC012616.1-201ENST00000600294 197 ntBASIC7.29□□□□□ -1.24
NCBP3Q53F19 IGLCOR22-2-201ENST00000605398 313 ntBASIC7.29□□□□□ -1.24
NCBP3Q53F19 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC7.29□□□□□ -1.24
NCBP3Q53F19 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
NCBP3Q53F19 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC7.29□□□□□ -1.24
NCBP3Q53F19 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
NCBP3Q53F19 ST7-221ENST00000465133 2155 ntTSL 5 BASIC7.29□□□□□ -1.24
NCBP3Q53F19 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
NCBP3Q53F19 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
NCBP3Q53F19 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
NCBP3Q53F19 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
NCBP3Q53F19 RNA5SP129-201ENST00000410276 118 ntBASIC7.28□□□□□ -1.24
NCBP3Q53F19 RNA5SP367-201ENST00000516557 118 ntBASIC7.28□□□□□ -1.24
NCBP3Q53F19 RNA5SP468-201ENST00000516782 93 ntBASIC7.28□□□□□ -1.24
NCBP3Q53F19 DEFB131E-201ENST00000532329 154 ntBASIC7.28□□□□□ -1.24
NCBP3Q53F19 MIR4505-201ENST00000582238 73 ntBASIC7.28□□□□□ -1.24
NCBP3Q53F19 RNU1-30P-201ENST00000606575 163 ntBASIC7.28□□□□□ -1.24
NCBP3Q53F19 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
NCBP3Q53F19 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
NCBP3Q53F19 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
NCBP3Q53F19 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
NCBP3Q53F19 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
NCBP3Q53F19 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NCBP3Q53F19 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
NCBP3Q53F19 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NCBP3Q53F19 MIR147B-201ENST00000390185 80 ntBASIC7.27□□□□□ -1.25
NCBP3Q53F19 RN7SL583P-201ENST00000475692 287 ntBASIC7.27□□□□□ -1.25
NCBP3Q53F19 AL049872.1-201ENST00000556323 322 ntBASIC7.27□□□□□ -1.25
NCBP3Q53F19 AC007229.1-201ENST00000590455 412 ntBASIC7.27□□□□□ -1.25
NCBP3Q53F19 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
NCBP3Q53F19 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC7.27□□□□□ -1.25
NCBP3Q53F19 AC018809.2-201ENST00000602436 3823 ntBASIC7.27□□□□□ -1.25
NCBP3Q53F19 U6.73-201ENST00000619194 103 ntBASIC7.27□□□□□ -1.25
NCBP3Q53F19 uc_338.7-201ENST00000621834 124 ntBASIC7.27□□□□□ -1.25
NCBP3Q53F19 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
NCBP3Q53F19 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC7.26□□□□□ -1.25
NCBP3Q53F19 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.26□□□□□ -1.25
NCBP3Q53F19 Y_RNA.73-201ENST00000362910 113 ntBASIC7.26□□□□□ -1.25
NCBP3Q53F19 Y_RNA.290-201ENST00000364879 114 ntBASIC7.26□□□□□ -1.25
NCBP3Q53F19 MIR300-201ENST00000401138 83 ntBASIC7.26□□□□□ -1.25
NCBP3Q53F19 RPS27P22-201ENST00000478056 241 ntBASIC7.26□□□□□ -1.25
NCBP3Q53F19 SCARNA23-201ENST00000516060 130 ntBASIC7.26□□□□□ -1.25
NCBP3Q53F19 SNORD19.2-201ENST00000516978 73 ntBASIC7.26□□□□□ -1.25
NCBP3Q53F19 AC011604.1-201ENST00000545978 196 ntBASIC7.26□□□□□ -1.25
NCBP3Q53F19 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.26□□□□□ -1.25
NCBP3Q53F19 MRPS21P7-201ENST00000566937 238 ntBASIC7.26□□□□□ -1.25
NCBP3Q53F19 AC022655.2-201ENST00000577280 318 ntBASIC7.26□□□□□ -1.25
NCBP3Q53F19 AC011445.2-201ENST00000599274 173 ntBASIC7.26□□□□□ -1.25
NCBP3Q53F19 MIR6133-201ENST00000617057 108 ntBASIC7.26□□□□□ -1.25
NCBP3Q53F19 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC7.26□□□□□ -1.25
NCBP3Q53F19 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NCBP3Q53F19 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC7.26□□□□□ -1.25
NCBP3Q53F19 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NCBP3Q53F19 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC7.26□□□□□ -1.25
NCBP3Q53F19 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NCBP3Q53F19 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NCBP3Q53F19 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC7.26□□□□□ -1.25
NCBP3Q53F19 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NCBP3Q53F19 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NCBP3Q53F19 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
NCBP3Q53F19 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NCBP3Q53F19 RNU4-36P-201ENST00000364294 144 ntBASIC7.25□□□□□ -1.25
NCBP3Q53F19 SNORA17A-201ENST00000391185 133 ntBASIC7.25□□□□□ -1.25
NCBP3Q53F19 RN7SKP229-201ENST00000410465 302 ntBASIC7.25□□□□□ -1.25
NCBP3Q53F19 AC023141.4-201ENST00000412031 328 ntBASIC7.25□□□□□ -1.25
NCBP3Q53F19 AC016717.1-201ENST00000448918 286 ntBASIC7.25□□□□□ -1.25
NCBP3Q53F19 RPL39P25-201ENST00000449384 154 ntBASIC7.25□□□□□ -1.25
NCBP3Q53F19 RNU7-14P-201ENST00000459331 62 ntBASIC7.25□□□□□ -1.25
NCBP3Q53F19 AC091826.1-201ENST00000514065 313 ntBASIC7.25□□□□□ -1.25
NCBP3Q53F19 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC7.25□□□□□ -1.25
NCBP3Q53F19 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC7.25□□□□□ -1.25
NCBP3Q53F19 AC022254.1-201ENST00000567857 235 ntBASIC7.25□□□□□ -1.25
NCBP3Q53F19 SNORA17.5-201ENST00000630429 132 ntBASIC7.25□□□□□ -1.25
NCBP3Q53F19 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
NCBP3Q53F19 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms