Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC004987.4-201ENST00000603383 338 ntBASIC0.85□□□□□ -2.27
RFX7Q2KHR2 AC026741.1-201ENST00000605892 482 ntBASIC0.85□□□□□ -2.27
RFX7Q2KHR2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.85□□□□□ -2.27
RFX7Q2KHR2 HSBP1P2-201ENST00000299671 229 ntBASIC0.84□□□□□ -2.27
RFX7Q2KHR2 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.84□□□□□ -2.27
RFX7Q2KHR2 RNU6-288P-201ENST00000363690 104 ntBASIC0.84□□□□□ -2.27
RFX7Q2KHR2 RNU6-611P-201ENST00000384276 104 ntBASIC0.84□□□□□ -2.27
RFX7Q2KHR2 SNORD14D-201ENST00000384390 87 ntBASIC0.84□□□□□ -2.27
RFX7Q2KHR2 PIGPP2-201ENST00000411569 458 ntBASIC0.84□□□□□ -2.27
RFX7Q2KHR2 ISCA1P1-201ENST00000426679 387 ntBASIC0.84□□□□□ -2.27
RFX7Q2KHR2 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.84□□□□□ -2.27
RFX7Q2KHR2 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.84□□□□□ -2.27
RFX7Q2KHR2 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.84□□□□□ -2.27
RFX7Q2KHR2 RNU7-136P-201ENST00000458819 69 ntBASIC0.84□□□□□ -2.27
RFX7Q2KHR2 RPS26P55-201ENST00000471178 356 ntBASIC0.84□□□□□ -2.27
RFX7Q2KHR2 AC104563.1-201ENST00000476147 376 ntBASIC0.84□□□□□ -2.27
RFX7Q2KHR2 AC104806.1-201ENST00000508720 308 ntBASIC0.84□□□□□ -2.27
RFX7Q2KHR2 RNA5SP330-201ENST00000517096 96 ntBASIC0.84□□□□□ -2.27
RFX7Q2KHR2 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.84□□□□□ -2.27
RFX7Q2KHR2 SLC2A13P1-201ENST00000531560 322 ntBASIC0.84□□□□□ -2.27
RFX7Q2KHR2 AP000763.2-201ENST00000540641 163 ntBASIC0.84□□□□□ -2.27
RFX7Q2KHR2 AC004812.1-201ENST00000540773 146 ntBASIC0.84□□□□□ -2.27
RFX7Q2KHR2 AL353997.4-201ENST00000586196 166 ntBASIC0.84□□□□□ -2.27
RFX7Q2KHR2 MIR8084-201ENST00000614105 89 ntBASIC0.84□□□□□ -2.27
RFX7Q2KHR2 MIR6134-201ENST00000617606 109 ntBASIC0.84□□□□□ -2.27
RFX7Q2KHR2 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.84□□□□□ -2.27
RFX7Q2KHR2 RNU1-58P-201ENST00000362413 163 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 RNU5B-1-201ENST00000363286 116 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 RNA5SP457-201ENST00000363657 124 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 RPL21P24-201ENST00000413752 448 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.83□□□□□ -2.28
RFX7Q2KHR2 AC010631.1-201ENST00000474150 156 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.83□□□□□ -2.28
RFX7Q2KHR2 AC121161.1-201ENST00000510606 652 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 PTP4A1P4-201ENST00000512479 322 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 RNA5SP404-201ENST00000517118 132 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 AC022784.5-201ENST00000522241 437 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
RFX7Q2KHR2 HIGD1AP17-201ENST00000554576 276 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.83□□□□□ -2.28
RFX7Q2KHR2 DPPA3P3-201ENST00000603842 430 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 AL445435.1-201ENST00000604232 665 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 AC107952.2-201ENST00000606048 486 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 AC008945.2-201ENST00000606056 604 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 AC231657.1-201ENST00000624313 397 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 AC091965.5-201ENST00000624785 342 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
RFX7Q2KHR2 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 Y_RNA.258-201ENST00000364613 105 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 RNU6-343P-201ENST00000364709 104 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.83□□□□□ -2.28
RFX7Q2KHR2 RNU6-546P-201ENST00000383991 107 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 MIR515-2-201ENST00000384883 83 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 MIR515-1-201ENST00000384884 83 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 AC013410.2-201ENST00000422627 201 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 AC012308.1-201ENST00000451232 178 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 PRELID3BP1-201ENST00000457142 540 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.83□□□□□ -2.28
RFX7Q2KHR2 MEMO1P3-201ENST00000459811 302 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 AC023194.1-201ENST00000493084 308 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.83□□□□□ -2.28
RFX7Q2KHR2 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.83□□□□□ -2.28
RFX7Q2KHR2 RNU6-143P-201ENST00000516942 93 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 RN7SKP258-201ENST00000517151 304 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 MIR4661-201ENST00000582720 75 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.83□□□□□ -2.28
RFX7Q2KHR2 AL133445.2-201ENST00000611191 527 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.83□□□□□ -2.28
RFX7Q2KHR2 AC090517.3-201ENST00000625170 141 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 AC004808.1-201ENST00000627671 721 ntBASIC0.83□□□□□ -2.28
RFX7Q2KHR2 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.82□□□□□ -2.28
RFX7Q2KHR2 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
RFX7Q2KHR2 RNU6-1235P-201ENST00000384559 107 ntBASIC0.82□□□□□ -2.28
RFX7Q2KHR2 MTCO1P56-201ENST00000401674 224 ntBASIC0.82□□□□□ -2.28
RFX7Q2KHR2 MIR1262-201ENST00000408276 93 ntBASIC0.82□□□□□ -2.28
RFX7Q2KHR2 NCOR1P3-201ENST00000420479 303 ntBASIC0.82□□□□□ -2.28
RFX7Q2KHR2 AC092634.2-201ENST00000428146 1010 ntBASIC0.82□□□□□ -2.28
RFX7Q2KHR2 AL135790.2-201ENST00000437701 267 ntBASIC0.82□□□□□ -2.28
RFX7Q2KHR2 MTATP6P30-201ENST00000443540 664 ntBASIC0.82□□□□□ -2.28
RFX7Q2KHR2 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.82□□□□□ -2.28
RFX7Q2KHR2 PGBD4P5-201ENST00000445958 426 ntBASIC0.82□□□□□ -2.28
RFX7Q2KHR2 BTF3P15-201ENST00000455606 336 ntBASIC0.82□□□□□ -2.28
RFX7Q2KHR2 RNU6-498P-201ENST00000459468 107 ntBASIC0.82□□□□□ -2.28
RFX7Q2KHR2 AC117454.1-201ENST00000491120 168 ntBASIC0.82□□□□□ -2.28
RFX7Q2KHR2 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.82□□□□□ -2.28
RFX7Q2KHR2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.82□□□□□ -2.28
RFX7Q2KHR2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.82□□□□□ -2.28
RFX7Q2KHR2 AP006587.4-201ENST00000526053 529 ntBASIC0.82□□□□□ -2.28
RFX7Q2KHR2 MIR5708-201ENST00000579723 85 ntBASIC0.82□□□□□ -2.28
RFX7Q2KHR2 AC073410.2-201ENST00000603240 332 ntBASIC0.82□□□□□ -2.28
RFX7Q2KHR2 AC006270.3-201ENST00000605967 1036 ntBASIC0.82□□□□□ -2.28
RFX7Q2KHR2 AC010487.4-201ENST00000637027 61 ntBASIC0.82□□□□□ -2.28
RFX7Q2KHR2 AL079343.1-201ENST00000572358 1771 ntBASIC0.81□□□□□ -2.28
RFX7Q2KHR2 RNU6-898P-201ENST00000365627 104 ntBASIC0.81□□□□□ -2.28
RFX7Q2KHR2 RNU6-439P-201ENST00000384188 106 ntBASIC0.81□□□□□ -2.28
RFX7Q2KHR2 RNA5SP193-201ENST00000410353 107 ntBASIC0.81□□□□□ -2.28
RFX7Q2KHR2 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.81□□□□□ -2.28
RFX7Q2KHR2 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.81□□□□□ -2.28
RFX7Q2KHR2 BRK1P2-201ENST00000442875 223 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms