Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXC1Q12948 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXC1Q12948 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXC1Q12948 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXC1Q12948 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXC1Q12948 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXC1Q12948 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXC1Q12948 AL513302.2-201ENST00000562313 1842 ntBASIC4.61□□□□□ -1.67
FOXC1Q12948 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXC1Q12948 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXC1Q12948 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXC1Q12948 MIR208A-201ENST00000362287 71 ntBASIC4.61□□□□□ -1.67
FOXC1Q12948 Y_RNA.52-201ENST00000362760 96 ntBASIC4.61□□□□□ -1.67
FOXC1Q12948 MIR891A-201ENST00000401237 79 ntBASIC4.61□□□□□ -1.67
FOXC1Q12948 RNU2-32P-201ENST00000411193 191 ntBASIC4.61□□□□□ -1.67
FOXC1Q12948 AC092047.1-201ENST00000424997 240 ntBASIC4.61□□□□□ -1.67
FOXC1Q12948 AC005300.1-201ENST00000428401 373 ntBASIC4.61□□□□□ -1.67
FOXC1Q12948 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC4.61□□□□□ -1.67
FOXC1Q12948 RPL23AP83-201ENST00000434984 473 ntBASIC4.61□□□□□ -1.67
FOXC1Q12948 MTATP8P2-201ENST00000435212 202 ntBASIC4.61□□□□□ -1.67
FOXC1Q12948 AC125238.1-201ENST00000448842 249 ntBASIC4.61□□□□□ -1.67
FOXC1Q12948 AL021397.1-201ENST00000451806 248 ntBASIC4.61□□□□□ -1.67
FOXC1Q12948 RN7SL542P-201ENST00000467147 294 ntBASIC4.61□□□□□ -1.67
FOXC1Q12948 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXC1Q12948 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXC1Q12948 SNORA70.12-201ENST00000516084 153 ntBASIC4.61□□□□□ -1.67
FOXC1Q12948 RNU6-109P-201ENST00000516364 107 ntBASIC4.61□□□□□ -1.67
FOXC1Q12948 RNU6-184P-201ENST00000516514 107 ntBASIC4.61□□□□□ -1.67
FOXC1Q12948 MIR4433B-201ENST00000581329 102 ntBASIC4.61□□□□□ -1.67
FOXC1Q12948 SNORD11B-201ENST00000607707 90 ntBASIC4.61□□□□□ -1.67
FOXC1Q12948 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
FOXC1Q12948 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXC1Q12948 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXC1Q12948 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXC1Q12948 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXC1Q12948 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXC1Q12948 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXC1Q12948 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXC1Q12948 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXC1Q12948 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXC1Q12948 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXC1Q12948 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXC1Q12948 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXC1Q12948 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
FOXC1Q12948 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXC1Q12948 RNU6-629P-201ENST00000384061 103 ntBASIC4.6□□□□□ -1.67
FOXC1Q12948 MIR153-1-201ENST00000384914 90 ntBASIC4.6□□□□□ -1.67
FOXC1Q12948 RNA5SP372-201ENST00000390836 115 ntBASIC4.6□□□□□ -1.67
FOXC1Q12948 CALM2P4-201ENST00000430810 426 ntBASIC4.6□□□□□ -1.67
FOXC1Q12948 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXC1Q12948 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.6□□□□□ -1.67
FOXC1Q12948 SNORD116-26-201ENST00000516006 96 ntBASIC4.6□□□□□ -1.67
FOXC1Q12948 RNA5SP392-201ENST00000516905 112 ntBASIC4.6□□□□□ -1.67
FOXC1Q12948 IGKV2D-19-201ENST00000523346 262 ntBASIC4.6□□□□□ -1.67
FOXC1Q12948 AC097639.2-201ENST00000603159 172 ntBASIC4.6□□□□□ -1.67
FOXC1Q12948 SNORD115-40-201ENST00000606510 82 ntBASIC4.6□□□□□ -1.67
FOXC1Q12948 MALAT1.1-201ENST00000618249 95 ntBASIC4.6□□□□□ -1.67
FOXC1Q12948 Y_RNA.818-201ENST00000618813 71 ntBASIC4.6□□□□□ -1.67
FOXC1Q12948 AL035470.1-201ENST00000622571 220 ntBASIC4.6□□□□□ -1.67
FOXC1Q12948 RNA5SP196-201ENST00000625967 102 ntBASIC4.6□□□□□ -1.67
FOXC1Q12948 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXC1Q12948 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXC1Q12948 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXC1Q12948 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXC1Q12948 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXC1Q12948 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXC1Q12948 AC112198.2-201ENST00000426589 6996 ntBASIC4.6□□□□□ -1.67
FOXC1Q12948 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXC1Q12948 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXC1Q12948 ABCC13-202ENST00000463099 3842 ntBASIC4.6□□□□□ -1.67
FOXC1Q12948 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXC1Q12948 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
FOXC1Q12948 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXC1Q12948 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
FOXC1Q12948 SNORA71.2-201ENST00000364941 134 ntBASIC4.59□□□□□ -1.67
FOXC1Q12948 MIR590-201ENST00000385008 97 ntBASIC4.59□□□□□ -1.67
FOXC1Q12948 MIR208B-201ENST00000401172 77 ntBASIC4.59□□□□□ -1.67
FOXC1Q12948 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
FOXC1Q12948 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
FOXC1Q12948 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.59□□□□□ -1.67
FOXC1Q12948 AC105137.1-201ENST00000484355 562 ntBASIC4.59□□□□□ -1.67
FOXC1Q12948 RNA5SP153-201ENST00000516498 76 ntBASIC4.59□□□□□ -1.67
FOXC1Q12948 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
FOXC1Q12948 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXC1Q12948 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
FOXC1Q12948 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.59□□□□□ -1.67
FOXC1Q12948 AL139124.1-201ENST00000609123 421 ntBASIC4.59□□□□□ -1.67
FOXC1Q12948 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
FOXC1Q12948 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.59□□□□□ -1.67
FOXC1Q12948 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.59□□□□□ -1.67
FOXC1Q12948 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
FOXC1Q12948 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
FOXC1Q12948 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.59□□□□□ -1.68
FOXC1Q12948 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.59□□□□□ -1.68
FOXC1Q12948 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
FOXC1Q12948 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.58□□□□□ -1.68
FOXC1Q12948 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
FOXC1Q12948 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
FOXC1Q12948 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
FOXC1Q12948 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms