Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 AL359740.1-201ENST00000624340 592 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 AL157786.1-207ENST00000627771 695 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SMARCB1Q12824 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.89□□□□□ -2.11
SMARCB1Q12824 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SMARCB1Q12824 RNU1-72P-201ENST00000362976 153 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 RNU6-384P-201ENST00000364900 104 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 Y_RNA.367-201ENST00000365544 101 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 SNORD116-8-201ENST00000384365 95 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 RNU6-19P-201ENST00000384718 107 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 FTH1P15-201ENST00000406984 280 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 USP9YP6-201ENST00000413550 854 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.88□□□□□ -2.11
SMARCB1Q12824 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.88□□□□□ -2.11
SMARCB1Q12824 AC073614.1-201ENST00000438690 650 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 AC003989.2-201ENST00000440224 169 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.88□□□□□ -2.11
SMARCB1Q12824 AC016691.1-201ENST00000441321 413 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.88□□□□□ -2.11
SMARCB1Q12824 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.88□□□□□ -2.11
SMARCB1Q12824 AL360271.2-201ENST00000447710 161 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SMARCB1Q12824 AL033528.1-201ENST00000453780 140 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 AC080013.2-201ENST00000460866 323 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 RN7SL274P-201ENST00000492268 272 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 RNU6-991P-201ENST00000516168 107 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 Vault.3-201ENST00000516676 95 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 SNORA31.23-201ENST00000517219 133 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.88□□□□□ -2.11
SMARCB1Q12824 OSBPL9P5-201ENST00000542581 171 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.88□□□□□ -2.11
SMARCB1Q12824 MIR4287-201ENST00000579398 78 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
SMARCB1Q12824 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.88□□□□□ -2.11
SMARCB1Q12824 AL021997.1-201ENST00000605757 193 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 MIR502-201ENST00000606349 86 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 AC098614.4-201ENST00000607601 462 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 AP001506.1-201ENST00000615444 211 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 AL359547.2-201ENST00000615810 418 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 AC008555.8-201ENST00000623602 2168 ntBASIC1.88□□□□□ -2.11
SMARCB1Q12824 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.87□□□□□ -2.11
SMARCB1Q12824 SNORD14B-201ENST00000364533 90 ntBASIC1.87□□□□□ -2.11
SMARCB1Q12824 RNU6-282P-201ENST00000365357 103 ntBASIC1.87□□□□□ -2.11
SMARCB1Q12824 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.87□□□□□ -2.11
SMARCB1Q12824 RN7SKP142-201ENST00000411236 328 ntBASIC1.87□□□□□ -2.11
SMARCB1Q12824 RNA5SP270-201ENST00000411361 118 ntBASIC1.87□□□□□ -2.11
SMARCB1Q12824 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.87□□□□□ -2.11
SMARCB1Q12824 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.87□□□□□ -2.11
SMARCB1Q12824 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.87□□□□□ -2.11
SMARCB1Q12824 AC124916.1-201ENST00000444020 547 ntBASIC1.87□□□□□ -2.11
SMARCB1Q12824 AC079448.1-201ENST00000449377 373 ntBASIC1.87□□□□□ -2.11
SMARCB1Q12824 SNRPFP4-201ENST00000456366 242 ntBASIC1.87□□□□□ -2.11
SMARCB1Q12824 RNA5SP269-201ENST00000459032 137 ntBASIC1.87□□□□□ -2.11
SMARCB1Q12824 AC068781.1-201ENST00000488231 618 ntBASIC1.87□□□□□ -2.11
SMARCB1Q12824 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.87□□□□□ -2.11
SMARCB1Q12824 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.87□□□□□ -2.11
SMARCB1Q12824 AC117522.1-201ENST00000509821 380 ntBASIC1.87□□□□□ -2.11
SMARCB1Q12824 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.87□□□□□ -2.11
SMARCB1Q12824 MTCO3P28-201ENST00000513351 515 ntBASIC1.87□□□□□ -2.11
SMARCB1Q12824 SNORA18.6-201ENST00000516792 115 ntBASIC1.87□□□□□ -2.11
SMARCB1Q12824 RN7SKP219-201ENST00000516825 296 ntBASIC1.87□□□□□ -2.11
SMARCB1Q12824 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.87□□□□□ -2.11
SMARCB1Q12824 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.87□□□□□ -2.11
SMARCB1Q12824 LINC00933-203ENST00000559812 219 ntBASIC1.87□□□□□ -2.11
SMARCB1Q12824 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.87□□□□□ -2.11
SMARCB1Q12824 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
SMARCB1Q12824 AC090897.2-201ENST00000581715 130 ntBASIC1.87□□□□□ -2.11
SMARCB1Q12824 SEPT7P9-203ENST00000604116 343 ntBASIC1.87□□□□□ -2.11
SMARCB1Q12824 AC108479.2-201ENST00000617314 601 ntBASIC1.87□□□□□ -2.11
SMARCB1Q12824 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.87□□□□□ -2.11
SMARCB1Q12824 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SMARCB1Q12824 TEX21P-201ENST00000447107 1476 ntBASIC1.87□□□□□ -2.11
SMARCB1Q12824 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SMARCB1Q12824 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.86□□□□□ -2.11
SMARCB1Q12824 RNA5SP125-201ENST00000364843 120 ntBASIC1.86□□□□□ -2.11
SMARCB1Q12824 RNU6-1280P-201ENST00000365211 107 ntBASIC1.86□□□□□ -2.11
SMARCB1Q12824 RNU6-395P-201ENST00000365662 106 ntBASIC1.86□□□□□ -2.11
SMARCB1Q12824 RNU6-74P-201ENST00000384235 107 ntBASIC1.86□□□□□ -2.11
SMARCB1Q12824 MIR1-2-201ENST00000384961 85 ntBASIC1.86□□□□□ -2.11
SMARCB1Q12824 AF228730.1-201ENST00000397972 663 ntBASIC1.86□□□□□ -2.11
SMARCB1Q12824 Y_RNA.623-201ENST00000411128 95 ntBASIC1.86□□□□□ -2.11
SMARCB1Q12824 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.86□□□□□ -2.11
SMARCB1Q12824 AC009518.2-201ENST00000418056 731 ntBASIC1.86□□□□□ -2.11
SMARCB1Q12824 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.86□□□□□ -2.11
SMARCB1Q12824 AIMP1P2-201ENST00000425294 312 ntBASIC1.86□□□□□ -2.11
SMARCB1Q12824 CETN4P-201ENST00000432407 469 ntBASIC1.86□□□□□ -2.11
SMARCB1Q12824 FABP5P14-201ENST00000437273 393 ntBASIC1.86□□□□□ -2.11
SMARCB1Q12824 MTND2P4-201ENST00000445034 1004 ntBASIC1.86□□□□□ -2.11
SMARCB1Q12824 AL136380.1-201ENST00000447970 162 ntBASIC1.86□□□□□ -2.11
SMARCB1Q12824 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.86□□□□□ -2.11
SMARCB1Q12824 RPL7P43-201ENST00000478876 753 ntBASIC1.86□□□□□ -2.11
SMARCB1Q12824 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.86□□□□□ -2.11
SMARCB1Q12824 RPS29P11-201ENST00000496507 171 ntBASIC1.86□□□□□ -2.11
SMARCB1Q12824 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.86□□□□□ -2.11
SMARCB1Q12824 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.86□□□□□ -2.11
SMARCB1Q12824 RNU1-86P-201ENST00000516108 154 ntBASIC1.86□□□□□ -2.11
SMARCB1Q12824 RNU1-107P-201ENST00000516617 154 ntBASIC1.86□□□□□ -2.11
SMARCB1Q12824 RNU2-19P-201ENST00000517288 84 ntBASIC1.86□□□□□ -2.11
SMARCB1Q12824 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.86□□□□□ -2.11
SMARCB1Q12824 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms