Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDH1Q08174 AC005176.2-201ENST00000596933 147 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 AC025946.2-201ENST00000603398 234 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDH1Q08174 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDH1Q08174 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDH1Q08174 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDH1Q08174 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDH1Q08174 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.16□□□□□ -1.74
PCDH1Q08174 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH1Q08174 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
PCDH1Q08174 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH1Q08174 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH1Q08174 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
PCDH1Q08174 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH1Q08174 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH1Q08174 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH1Q08174 RNU6-50P-201ENST00000362356 103 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 SNORD74.4-201ENST00000364129 80 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 Y_RNA.240-201ENST00000364469 95 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 SNORA62-201ENST00000365493 153 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 Y_RNA.383-201ENST00000383855 97 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 SNORA36A-201ENST00000384221 132 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDH1Q08174 RPL23AP36-201ENST00000413895 458 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDH1Q08174 RPL23AP3-201ENST00000453844 468 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 SNORD2.1-201ENST00000458762 69 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 AP001324.2-201ENST00000461163 319 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 RN7SL98P-201ENST00000462271 300 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 AC091021.1-201ENST00000468051 388 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 RPL21P126-201ENST00000470049 478 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 RPS29P26-201ENST00000477483 171 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 AC020593.1-201ENST00000507399 299 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDH1Q08174 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDH1Q08174 IFITM8P-201ENST00000522529 394 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDH1Q08174 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH1Q08174 AC021231.3-201ENST00000558497 370 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 CYP4A43P-201ENST00000568156 121 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 AC136624.4-201ENST00000573044 370 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 AL451007.1-201ENST00000595491 289 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.16□□□□□ -1.74
PCDH1Q08174 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDH1Q08174 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PCDH1Q08174 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDH1Q08174 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDH1Q08174 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDH1Q08174 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH1Q08174 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PCDH1Q08174 AC092268.1-201ENST00000342691 405 ntBASIC4.15□□□□□ -1.75
PCDH1Q08174 MIR331-201ENST00000362302 94 ntBASIC4.15□□□□□ -1.75
PCDH1Q08174 RNA5SP197-201ENST00000363357 119 ntBASIC4.15□□□□□ -1.75
PCDH1Q08174 RNU1-32P-201ENST00000363937 159 ntBASIC4.15□□□□□ -1.75
PCDH1Q08174 RNU6-1280P-201ENST00000365211 107 ntBASIC4.15□□□□□ -1.75
PCDH1Q08174 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDH1Q08174 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDH1Q08174 AL157831.1-201ENST00000426134 473 ntBASIC4.15□□□□□ -1.75
PCDH1Q08174 AC078809.1-201ENST00000427601 140 ntBASIC4.15□□□□□ -1.75
PCDH1Q08174 snoU13.6-201ENST00000458785 104 ntBASIC4.15□□□□□ -1.75
PCDH1Q08174 RN7SL385P-201ENST00000468873 276 ntBASIC4.15□□□□□ -1.75
PCDH1Q08174 S100A11P1-201ENST00000477525 312 ntBASIC4.15□□□□□ -1.75
PCDH1Q08174 RPS27AP10-201ENST00000496103 208 ntBASIC4.15□□□□□ -1.75
PCDH1Q08174 AC005921.1-201ENST00000510589 286 ntBASIC4.15□□□□□ -1.75
PCDH1Q08174 IGKV2-38-201ENST00000517443 247 ntBASIC4.15□□□□□ -1.75
PCDH1Q08174 MIR4715-201ENST00000584117 79 ntBASIC4.15□□□□□ -1.75
PCDH1Q08174 AC073349.3-201ENST00000617616 186 ntBASIC4.15□□□□□ -1.75
PCDH1Q08174 MIR4727-201ENST00000622232 55 ntBASIC4.15□□□□□ -1.75
PCDH1Q08174 AC140479.6-201ENST00000633535 357 ntBASIC4.15□□□□□ -1.75
PCDH1Q08174 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PCDH1Q08174 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PCDH1Q08174 AC008725.1-201ENST00000605123 2263 ntBASIC4.15□□□□□ -1.75
PCDH1Q08174 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDH1Q08174 AL359854.1-201ENST00000614203 1594 ntBASIC4.14□□□□□ -1.75
PCDH1Q08174 USP8P1-201ENST00000494673 3183 ntBASIC4.14□□□□□ -1.75
PCDH1Q08174 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDH1Q08174 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDH1Q08174 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDH1Q08174 RNU6-923P-201ENST00000364753 107 ntBASIC4.14□□□□□ -1.75
PCDH1Q08174 RNA5SP189-201ENST00000364920 115 ntBASIC4.14□□□□□ -1.75
PCDH1Q08174 RNU6-1035P-201ENST00000384477 107 ntBASIC4.14□□□□□ -1.75
PCDH1Q08174 MIR613-201ENST00000385248 95 ntBASIC4.14□□□□□ -1.75
PCDH1Q08174 RNA5SP39-201ENST00000411245 120 ntBASIC4.14□□□□□ -1.75
PCDH1Q08174 HLA-N-201ENST00000437516 135 ntBASIC4.14□□□□□ -1.75
PCDH1Q08174 AC010095.1-201ENST00000443543 144 ntBASIC4.14□□□□□ -1.75
PCDH1Q08174 RN7SL691P-201ENST00000494487 301 ntBASIC4.14□□□□□ -1.75
PCDH1Q08174 RNU7-200P-201ENST00000516105 62 ntBASIC4.14□□□□□ -1.75
PCDH1Q08174 RNA5SP468-201ENST00000516782 93 ntBASIC4.14□□□□□ -1.75
PCDH1Q08174 RNA5SP54-201ENST00000516951 92 ntBASIC4.14□□□□□ -1.75
PCDH1Q08174 CKS1BP7-201ENST00000522230 235 ntBASIC4.14□□□□□ -1.75
PCDH1Q08174 AC009163.5-201ENST00000575421 637 ntBASIC4.14□□□□□ -1.75
PCDH1Q08174 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDH1Q08174 AL713866.2-201ENST00000603579 219 ntBASIC4.14□□□□□ -1.75
PCDH1Q08174 AL359198.2-201ENST00000611836 194 ntBASIC4.14□□□□□ -1.75
PCDH1Q08174 FAM27D1-201ENST00000612308 341 ntBASIC4.14□□□□□ -1.75
PCDH1Q08174 AL357075.2-201ENST00000614906 189 ntBASIC4.14□□□□□ -1.75
PCDH1Q08174 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms