Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 SNORD114-9-201ENST00000364370 72 ntBASIC-0.35□□□□□ -2.47
TFF3Q07654 Y_RNA.255-201ENST00000364581 97 ntBASIC-0.35□□□□□ -2.47
TFF3Q07654 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
TFF3Q07654 TIMM9P1-201ENST00000436122 256 ntBASIC-0.35□□□□□ -2.47
TFF3Q07654 UBE2V1P8-201ENST00000437166 265 ntBASIC-0.35□□□□□ -2.47
TFF3Q07654 MTCO3P18-201ENST00000440206 761 ntBASIC-0.35□□□□□ -2.47
TFF3Q07654 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.35□□□□□ -2.47
TFF3Q07654 MTCO3P7-201ENST00000510008 774 ntBASIC-0.35□□□□□ -2.47
TFF3Q07654 CYCSP27-201ENST00000527643 293 ntBASIC-0.35□□□□□ -2.47
TFF3Q07654 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC-0.35□□□□□ -2.47
TFF3Q07654 AC124293.1-201ENST00000530034 493 ntBASIC-0.35□□□□□ -2.47
TFF3Q07654 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC-0.35□□□□□ -2.47
TFF3Q07654 AC024257.5-201ENST00000612739 531 ntBASIC-0.35□□□□□ -2.47
TFF3Q07654 AC130324.3-201ENST00000614165 542 ntBASIC-0.35□□□□□ -2.47
TFF3Q07654 RNU5E-1-201ENST00000362477 120 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 RNA5SP368-201ENST00000364298 116 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 SNORA51.6-201ENST00000384151 125 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 MIR942-201ENST00000401111 86 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 RNU6ATAC8P-201ENST00000408460 126 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 RNA5SP451-201ENST00000410588 110 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 RPL26P27-201ENST00000414397 437 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 AL161935.2-201ENST00000414627 60 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 AL035398.1-201ENST00000430869 322 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC-0.36□□□□□ -2.47
TFF3Q07654 AL049734.2-201ENST00000441066 616 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.36□□□□□ -2.47
TFF3Q07654 HMGN1P13-201ENST00000505795 138 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 AC105758.1-201ENST00000506038 399 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.36□□□□□ -2.47
TFF3Q07654 RNVU1-2-201ENST00000516326 135 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 RNA5SP503-201ENST00000517047 117 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC-0.36□□□□□ -2.47
TFF3Q07654 DEFB108D-201ENST00000527787 222 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC-0.36□□□□□ -2.47
TFF3Q07654 AC060771.1-201ENST00000582031 164 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 AC091057.3-201ENST00000602684 733 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 AL713998.2-201ENST00000604538 1198 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 AL022345.1-201ENST00000607292 135 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 AC092953.2-201ENST00000608000 699 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 AL627230.5-201ENST00000619807 58 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 AL138713.1-201ENST00000624026 2130 ntBASIC-0.36□□□□□ -2.47
TFF3Q07654 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.36□□□□□ -2.47
TFF3Q07654 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC-0.37□□□□□ -2.47
TFF3Q07654 MED14P1-201ENST00000430517 648 ntBASIC-0.37□□□□□ -2.47
TFF3Q07654 NANOGP2-201ENST00000435391 727 ntBASIC-0.37□□□□□ -2.47
TFF3Q07654 RAB11AP1-201ENST00000442978 646 ntBASIC-0.37□□□□□ -2.47
TFF3Q07654 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC-0.37□□□□□ -2.47
TFF3Q07654 AC026371.1-201ENST00000551867 419 ntBASIC-0.37□□□□□ -2.47
TFF3Q07654 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.38□□□□□ -2.47
TFF3Q07654 MTND2P9-201ENST00000422293 931 ntBASIC-0.38□□□□□ -2.47
TFF3Q07654 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.38□□□□□ -2.47
TFF3Q07654 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.38□□□□□ -2.47
TFF3Q07654 AC016717.1-201ENST00000448918 286 ntBASIC-0.38□□□□□ -2.47
TFF3Q07654 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.38□□□□□ -2.47
TFF3Q07654 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC-0.38□□□□□ -2.47
TFF3Q07654 RNU6-1092P-201ENST00000516955 87 ntBASIC-0.38□□□□□ -2.47
TFF3Q07654 AC007834.2-201ENST00000536310 343 ntBASIC-0.38□□□□□ -2.47
TFF3Q07654 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC-0.38□□□□□ -2.47
TFF3Q07654 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC-0.38□□□□□ -2.47
TFF3Q07654 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC-0.38□□□□□ -2.47
TFF3Q07654 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.38□□□□□ -2.47
TFF3Q07654 RPL21P136-201ENST00000605378 396 ntBASIC-0.38□□□□□ -2.47
TFF3Q07654 MIR8064-201ENST00000612863 90 ntBASIC-0.38□□□□□ -2.47
TFF3Q07654 uc_338.15-201ENST00000615470 191 ntBASIC-0.38□□□□□ -2.47
TFF3Q07654 FAS-AS1.2-201ENST00000620386 170 ntBASIC-0.38□□□□□ -2.47
TFF3Q07654 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC-0.38□□□□□ -2.47
TFF3Q07654 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.38□□□□□ -2.47
TFF3Q07654 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC-0.38□□□□□ -2.47
TFF3Q07654 RNU4-79P-201ENST00000362764 141 ntBASIC-0.39□□□□□ -2.47
TFF3Q07654 RNA5SP264-201ENST00000363115 107 ntBASIC-0.39□□□□□ -2.47
TFF3Q07654 SNORD14D-201ENST00000384390 87 ntBASIC-0.39□□□□□ -2.47
TFF3Q07654 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.39□□□□□ -2.47
TFF3Q07654 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC-0.39□□□□□ -2.47
TFF3Q07654 MTCO3P45-201ENST00000443036 613 ntBASIC-0.39□□□□□ -2.47
TFF3Q07654 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.39□□□□□ -2.47
TFF3Q07654 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.39□□□□□ -2.47
TFF3Q07654 MTCO2P15-201ENST00000532655 656 ntBASIC-0.39□□□□□ -2.47
TFF3Q07654 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.39□□□□□ -2.47
TFF3Q07654 ZNF92P3-201ENST00000596594 954 ntBASIC-0.39□□□□□ -2.47
TFF3Q07654 AC068620.3-201ENST00000602749 560 ntBASIC-0.39□□□□□ -2.47
TFF3Q07654 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.39□□□□□ -2.47
TFF3Q07654 RNU6-46P-201ENST00000383860 107 ntBASIC-0.4□□□□□ -2.47
TFF3Q07654 MIR325-201ENST00000385260 98 ntBASIC-0.4□□□□□ -2.47
TFF3Q07654 RNA5SP219-201ENST00000390940 113 ntBASIC-0.4□□□□□ -2.47
TFF3Q07654 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.4□□□□□ -2.47
TFF3Q07654 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC-0.4□□□□□ -2.47
TFF3Q07654 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.4□□□□□ -2.47
TFF3Q07654 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC-0.4□□□□□ -2.47
TFF3Q07654 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC-0.4□□□□□ -2.47
TFF3Q07654 RNU5A-7P-201ENST00000515979 116 ntBASIC-0.4□□□□□ -2.47
TFF3Q07654 SNORA14.1-201ENST00000516113 141 ntBASIC-0.4□□□□□ -2.47
TFF3Q07654 AC092470.1-201ENST00000546187 132 ntBASIC-0.4□□□□□ -2.47
TFF3Q07654 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC-0.4□□□□□ -2.47
TFF3Q07654 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.4□□□□□ -2.47
TFF3Q07654 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.4□□□□□ -2.47
TFF3Q07654 AC105148.1-201ENST00000604961 409 ntBASIC-0.4□□□□□ -2.47
TFF3Q07654 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC-0.4□□□□□ -2.47
TFF3Q07654 AC068647.2-201ENST00000637380 353 ntBASIC-0.4□□□□□ -2.47
TFF3Q07654 AL591034.2-201ENST00000402839 359 ntBASIC-0.41□□□□□ -2.48
TFF3Q07654 MIR1262-201ENST00000408276 93 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms