Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RNA5SP217-201ENST00000515959 91 ntBASIC2.92□□□□□ -1.94
LTBQ06643 RNU6-699P-201ENST00000517081 110 ntBASIC2.92□□□□□ -1.94
LTBQ06643 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LTBQ06643 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.92□□□□□ -1.94
LTBQ06643 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.92□□□□□ -1.94
LTBQ06643 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.92□□□□□ -1.94
LTBQ06643 MIR1273C-201ENST00000578669 77 ntBASIC2.92□□□□□ -1.94
LTBQ06643 MIR2682-201ENST00000580305 110 ntBASIC2.92□□□□□ -1.94
LTBQ06643 MIR3671-201ENST00000580455 88 ntBASIC2.92□□□□□ -1.94
LTBQ06643 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.92□□□□□ -1.94
LTBQ06643 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
LTBQ06643 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.92□□□□□ -1.94
LTBQ06643 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LTBQ06643 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.92□□□□□ -1.94
LTBQ06643 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
LTBQ06643 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
LTBQ06643 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
LTBQ06643 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.91□□□□□ -1.94
LTBQ06643 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LTBQ06643 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.91□□□□□ -1.94
LTBQ06643 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.91□□□□□ -1.94
LTBQ06643 RNU6-1309P-201ENST00000363305 108 ntBASIC2.91□□□□□ -1.94
LTBQ06643 Y_RNA.158-201ENST00000363651 101 ntBASIC2.91□□□□□ -1.94
LTBQ06643 Y_RNA.252-201ENST00000364556 101 ntBASIC2.91□□□□□ -1.94
LTBQ06643 RNU1-140P-201ENST00000365040 165 ntBASIC2.91□□□□□ -1.94
LTBQ06643 Y_RNA.324-201ENST00000365165 102 ntBASIC2.91□□□□□ -1.94
LTBQ06643 RNU6-463P-201ENST00000384340 107 ntBASIC2.91□□□□□ -1.94
LTBQ06643 RNY1P14-201ENST00000384426 108 ntBASIC2.91□□□□□ -1.94
LTBQ06643 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
LTBQ06643 MRPL42P3-201ENST00000401492 326 ntBASIC2.91□□□□□ -1.94
LTBQ06643 AL138885.1-201ENST00000405921 675 ntBASIC2.91□□□□□ -1.94
LTBQ06643 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.91□□□□□ -1.94
LTBQ06643 RPL32P35-201ENST00000415214 394 ntBASIC2.91□□□□□ -1.94
LTBQ06643 Z85995.1-201ENST00000415547 335 ntBASIC2.91□□□□□ -1.94
LTBQ06643 AC243428.1-201ENST00000421099 264 ntBASIC2.91□□□□□ -1.94
LTBQ06643 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.91□□□□□ -1.94
LTBQ06643 IPO7P1-201ENST00000442031 636 ntBASIC2.91□□□□□ -1.94
LTBQ06643 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.91□□□□□ -1.94
LTBQ06643 RPL23AP31-201ENST00000456160 467 ntBASIC2.91□□□□□ -1.94
LTBQ06643 Y_RNA.638-201ENST00000459374 113 ntBASIC2.91□□□□□ -1.94
LTBQ06643 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.91□□□□□ -1.94
LTBQ06643 Y_RNA.661-201ENST00000516003 99 ntBASIC2.91□□□□□ -1.94
LTBQ06643 SNORA31.8-201ENST00000516327 108 ntBASIC2.91□□□□□ -1.94
LTBQ06643 SCARNA16.2-201ENST00000516520 172 ntBASIC2.91□□□□□ -1.94
LTBQ06643 RNU6-1315P-201ENST00000517187 99 ntBASIC2.91□□□□□ -1.94
LTBQ06643 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
LTBQ06643 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
LTBQ06643 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
LTBQ06643 BNIP3P16-201ENST00000589779 534 ntBASIC2.91□□□□□ -1.94
LTBQ06643 AL033523.1-201ENST00000605153 153 ntBASIC2.91□□□□□ -1.94
LTBQ06643 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.91□□□□□ -1.94
LTBQ06643 AL110115.1-201ENST00000614396 364 ntBASIC2.91□□□□□ -1.94
LTBQ06643 AC091903.1-201ENST00000624322 454 ntBASIC2.91□□□□□ -1.94
LTBQ06643 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.91□□□□□ -1.94
LTBQ06643 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.91□□□□□ -1.94
LTBQ06643 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
LTBQ06643 MTND5P27-201ENST00000428871 1720 ntBASIC2.9□□□□□ -1.94
LTBQ06643 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.9□□□□□ -1.95
LTBQ06643 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
LTBQ06643 Y_RNA.2-201ENST00000362330 96 ntBASIC2.9□□□□□ -1.95
LTBQ06643 MIR568-201ENST00000385036 95 ntBASIC2.9□□□□□ -1.95
LTBQ06643 RNU6-985P-201ENST00000410182 104 ntBASIC2.9□□□□□ -1.95
LTBQ06643 UBE2V1P4-201ENST00000425374 344 ntBASIC2.9□□□□□ -1.95
LTBQ06643 ARF4P2-201ENST00000430209 526 ntBASIC2.9□□□□□ -1.95
LTBQ06643 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.9□□□□□ -1.95
LTBQ06643 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.9□□□□□ -1.95
LTBQ06643 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.9□□□□□ -1.95
LTBQ06643 RPL12P25-201ENST00000455592 494 ntBASIC2.9□□□□□ -1.95
LTBQ06643 AP002884.2-201ENST00000471647 395 ntBASIC2.9□□□□□ -1.95
LTBQ06643 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.9□□□□□ -1.95
LTBQ06643 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.9□□□□□ -1.95
LTBQ06643 AC008716.1-201ENST00000511084 513 ntBASIC2.9□□□□□ -1.95
LTBQ06643 SCARNA15.2-201ENST00000516409 127 ntBASIC2.9□□□□□ -1.95
LTBQ06643 RNU6-1256P-201ENST00000516539 103 ntBASIC2.9□□□□□ -1.95
LTBQ06643 RNU6-143P-201ENST00000516942 93 ntBASIC2.9□□□□□ -1.95
LTBQ06643 AC069113.1-201ENST00000517763 267 ntBASIC2.9□□□□□ -1.95
LTBQ06643 HIGD1AP1-201ENST00000550979 275 ntBASIC2.9□□□□□ -1.95
LTBQ06643 TRAV37-201ENST00000553906 342 ntBASIC2.9□□□□□ -1.95
LTBQ06643 AL157871.3-201ENST00000557231 293 ntBASIC2.9□□□□□ -1.95
LTBQ06643 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.9□□□□□ -1.95
LTBQ06643 AC123912.5-201ENST00000605470 343 ntBASIC2.9□□□□□ -1.95
LTBQ06643 AC005014.2-201ENST00000607795 599 ntBASIC2.9□□□□□ -1.95
LTBQ06643 AC006157.1-201ENST00000611750 366 ntBASIC2.9□□□□□ -1.95
LTBQ06643 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.9□□□□□ -1.95
LTBQ06643 AC090132.2-201ENST00000615881 347 ntBASIC2.9□□□□□ -1.95
LTBQ06643 AC138627.2-201ENST00000624202 601 ntBASIC2.9□□□□□ -1.95
LTBQ06643 AL078596.1-201ENST00000624856 447 ntBASIC2.9□□□□□ -1.95
LTBQ06643 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
LTBQ06643 RNU6-384P-201ENST00000364900 104 ntBASIC2.89□□□□□ -1.95
LTBQ06643 MIR517A-201ENST00000385001 87 ntBASIC2.89□□□□□ -1.95
LTBQ06643 MIR301A-201ENST00000385261 86 ntBASIC2.89□□□□□ -1.95
LTBQ06643 AL445529.1-201ENST00000398713 389 ntBASIC2.89□□□□□ -1.95
LTBQ06643 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.89□□□□□ -1.95
LTBQ06643 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.89□□□□□ -1.95
LTBQ06643 USMG5P1-201ENST00000425964 177 ntBASIC2.89□□□□□ -1.95
LTBQ06643 AC107083.1-201ENST00000439643 279 ntBASIC2.89□□□□□ -1.95
LTBQ06643 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.89□□□□□ -1.95
LTBQ06643 Z75741.1-201ENST00000446793 314 ntBASIC2.89□□□□□ -1.95
LTBQ06643 GSTA11P-201ENST00000452866 669 ntBASIC2.89□□□□□ -1.95
LTBQ06643 AL049830.2-201ENST00000480072 201 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms