Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 AC103710.2-202ENST00000641454 2853 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 RBBP8P1-201ENST00000449447 1844 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
CSTF1Q05048 U8.3-201ENST00000363321 132 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 RNA5SP240-201ENST00000365355 128 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 RNU6-116P-201ENST00000384042 109 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 SNORD116-2-201ENST00000384274 95 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 SNORD116-1-201ENST00000384335 95 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 SNORD116-6-201ENST00000384711 96 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 MIR578-201ENST00000384828 96 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 SNORA48.3-201ENST00000391081 134 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 UBE2V1P10-201ENST00000414685 269 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 RPL21P90-201ENST00000415692 466 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.07□□□□□ -2.08
CSTF1Q05048 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.07□□□□□ -2.08
CSTF1Q05048 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.07□□□□□ -2.08
CSTF1Q05048 AC245517.4-201ENST00000448601 281 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CSTF1Q05048 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.07□□□□□ -2.08
CSTF1Q05048 CYP2C59P-201ENST00000457790 269 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 MED28P2-201ENST00000475771 317 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 AC079804.2-201ENST00000490376 200 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.07□□□□□ -2.08
CSTF1Q05048 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.07□□□□□ -2.08
CSTF1Q05048 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.07□□□□□ -2.08
CSTF1Q05048 CYCSP26-201ENST00000534107 320 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 BNIP3P30-201ENST00000601184 574 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 Z99497.2-201ENST00000603634 310 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 AC091304.9-201ENST00000612091 226 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 AL603755.1-201ENST00000619504 163 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 AC048344.4-201ENST00000619744 527 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 AL359740.1-201ENST00000624340 592 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.07□□□□□ -2.08
CSTF1Q05048 MIR3974-201ENST00000637126 96 ntBASIC2.07□□□□□ -2.08
CSTF1Q05048 ZNF355P-201ENST00000427301 3216 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
CSTF1Q05048 Y_RNA.22-201ENST00000362492 102 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 SNORD114-19-201ENST00000363072 75 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CSTF1Q05048 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CSTF1Q05048 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.06□□□□□ -2.08
CSTF1Q05048 CYCSP46-201ENST00000423569 204 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 AL627311.1-201ENST00000431514 115 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 MTND4P32-201ENST00000437189 1237 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.06□□□□□ -2.08
CSTF1Q05048 AC073614.1-201ENST00000438690 650 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.06□□□□□ -2.08
CSTF1Q05048 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.06□□□□□ -2.08
CSTF1Q05048 SNRPGP9-201ENST00000456025 225 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.06□□□□□ -2.08
CSTF1Q05048 HMGB1P30-201ENST00000492455 606 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 AC104564.1-201ENST00000493028 407 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 AC090255.1-201ENST00000495779 349 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.06□□□□□ -2.08
CSTF1Q05048 AC116562.3-201ENST00000506136 177 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.06□□□□□ -2.08
CSTF1Q05048 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 Y_RNA.688-201ENST00000516565 95 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.06□□□□□ -2.08
CSTF1Q05048 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.06□□□□□ -2.08
CSTF1Q05048 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.06□□□□□ -2.08
CSTF1Q05048 AC068587.5-201ENST00000528506 175 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 OR5AL2P-201ENST00000532185 920 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.06□□□□□ -2.08
CSTF1Q05048 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.06□□□□□ -2.08
CSTF1Q05048 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.06□□□□□ -2.08
CSTF1Q05048 AL022154.1-201ENST00000604698 785 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 AC121247.2-201ENST00000604776 136 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 Z84480.1-201ENST00000605131 311 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 MIR98-201ENST00000606724 119 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 AC245008.1-201ENST00000608123 476 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 AC096772.1-201ENST00000609146 564 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 AC108479.2-201ENST00000617314 601 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 AC078883.4-201ENST00000623218 367 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 AC138627.2-201ENST00000624202 601 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 U6.114-201ENST00000636407 96 ntBASIC2.06□□□□□ -2.08
CSTF1Q05048 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.06□□□□□ -2.08
CSTF1Q05048 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
CSTF1Q05048 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CSTF1Q05048 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.05□□□□□ -2.08
CSTF1Q05048 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.05□□□□□ -2.08
CSTF1Q05048 RNU4-40P-201ENST00000364351 143 ntBASIC2.05□□□□□ -2.08
CSTF1Q05048 RNU6-61P-201ENST00000365528 109 ntBASIC2.05□□□□□ -2.08
CSTF1Q05048 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CSTF1Q05048 SNORD116-20-201ENST00000384529 92 ntBASIC2.05□□□□□ -2.08
CSTF1Q05048 RNY3P10-201ENST00000384764 102 ntBASIC2.05□□□□□ -2.08
CSTF1Q05048 U3.40-201ENST00000408706 208 ntBASIC2.05□□□□□ -2.08
CSTF1Q05048 RNU6-321P-201ENST00000410912 106 ntBASIC2.05□□□□□ -2.08
CSTF1Q05048 HMGB3P2-201ENST00000411913 584 ntBASIC2.05□□□□□ -2.08
CSTF1Q05048 HMGN1P14-201ENST00000412459 517 ntBASIC2.05□□□□□ -2.08
CSTF1Q05048 AL353621.1-201ENST00000418219 243 ntBASIC2.05□□□□□ -2.08
CSTF1Q05048 BTF3P4-201ENST00000418852 495 ntBASIC2.05□□□□□ -2.08
CSTF1Q05048 AC090960.1-201ENST00000421072 306 ntBASIC2.05□□□□□ -2.08
CSTF1Q05048 AIMP1P2-201ENST00000425294 312 ntBASIC2.05□□□□□ -2.08
CSTF1Q05048 VN1R108P-201ENST00000431580 830 ntBASIC2.05□□□□□ -2.08
CSTF1Q05048 MTATP6P16-201ENST00000434543 526 ntBASIC2.05□□□□□ -2.08
CSTF1Q05048 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.05□□□□□ -2.08
CSTF1Q05048 AL022238.1-201ENST00000442557 355 ntBASIC2.05□□□□□ -2.08
CSTF1Q05048 AL033528.1-201ENST00000453780 140 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms