Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RNU6-1016P-201ENST00000516689 94 ntBASIC2.43□□□□□ -2.02
LMO4P61968 RNU6-677P-201ENST00000516914 101 ntBASIC2.43□□□□□ -2.02
LMO4P61968 RNU6-1137P-201ENST00000517073 99 ntBASIC2.43□□□□□ -2.02
LMO4P61968 RN7SKP258-201ENST00000517151 304 ntBASIC2.43□□□□□ -2.02
LMO4P61968 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.43□□□□□ -2.02
LMO4P61968 MIR3186-201ENST00000577404 85 ntBASIC2.43□□□□□ -2.02
LMO4P61968 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.43□□□□□ -2.02
LMO4P61968 MIR3941-201ENST00000582572 103 ntBASIC2.43□□□□□ -2.02
LMO4P61968 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.43□□□□□ -2.02
LMO4P61968 AC006023.1-201ENST00000603944 259 ntBASIC2.43□□□□□ -2.02
LMO4P61968 AC104763.2-201ENST00000604179 382 ntBASIC2.43□□□□□ -2.02
LMO4P61968 AL161629.2-201ENST00000615347 275 ntBASIC2.43□□□□□ -2.02
LMO4P61968 AL359547.2-201ENST00000615810 418 ntBASIC2.43□□□□□ -2.02
LMO4P61968 AC010378.1-201ENST00000619270 362 ntBASIC2.43□□□□□ -2.02
LMO4P61968 AC091925.1-201ENST00000623204 462 ntBASIC2.43□□□□□ -2.02
LMO4P61968 AC022418.1-201ENST00000624118 445 ntBASIC2.43□□□□□ -2.02
LMO4P61968 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
LMO4P61968 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LMO4P61968 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
LMO4P61968 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.43□□□□□ -2.02
LMO4P61968 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LMO4P61968 MAPK10-322ENST00000641485 4530 ntBASIC2.43□□□□□ -2.02
LMO4P61968 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LMO4P61968 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LMO4P61968 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LMO4P61968 Y_RNA.5-201ENST00000362334 102 ntBASIC2.42□□□□□ -2.02
LMO4P61968 RNU6-1309P-201ENST00000363305 108 ntBASIC2.42□□□□□ -2.02
LMO4P61968 RNU6-288P-201ENST00000363690 104 ntBASIC2.42□□□□□ -2.02
LMO4P61968 RNU6-593P-201ENST00000364716 112 ntBASIC2.42□□□□□ -2.02
LMO4P61968 SNORA18.3-201ENST00000384122 132 ntBASIC2.42□□□□□ -2.02
LMO4P61968 Y_RNA.473-201ENST00000384333 102 ntBASIC2.42□□□□□ -2.02
LMO4P61968 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.42□□□□□ -2.02
LMO4P61968 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.42□□□□□ -2.02
LMO4P61968 AC245291.1-201ENST00000419501 328 ntBASIC2.42□□□□□ -2.02
LMO4P61968 AL139281.1-201ENST00000422120 335 ntBASIC2.42□□□□□ -2.02
LMO4P61968 AL358176.2-201ENST00000425769 204 ntBASIC2.42□□□□□ -2.02
LMO4P61968 AL591212.2-201ENST00000433923 257 ntBASIC2.42□□□□□ -2.02
LMO4P61968 AC105272.1-201ENST00000438604 198 ntBASIC2.42□□□□□ -2.02
LMO4P61968 RPS24P13-201ENST00000442520 397 ntBASIC2.42□□□□□ -2.02
LMO4P61968 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.42□□□□□ -2.02
LMO4P61968 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.42□□□□□ -2.02
LMO4P61968 HMGB3P8-201ENST00000449709 577 ntBASIC2.42□□□□□ -2.02
LMO4P61968 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.42□□□□□ -2.02
LMO4P61968 RPL37P6-201ENST00000460682 294 ntBASIC2.42□□□□□ -2.02
LMO4P61968 RPL7P42-201ENST00000481005 679 ntBASIC2.42□□□□□ -2.02
LMO4P61968 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.42□□□□□ -2.02
LMO4P61968 AC009901.1-201ENST00000506703 541 ntBASIC2.42□□□□□ -2.02
LMO4P61968 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.42□□□□□ -2.02
LMO4P61968 AC026782.1-201ENST00000512952 449 ntBASIC2.42□□□□□ -2.02
LMO4P61968 RN7SKP132-201ENST00000516001 208 ntBASIC2.42□□□□□ -2.02
LMO4P61968 SNORA31.3-201ENST00000516029 96 ntBASIC2.42□□□□□ -2.02
LMO4P61968 RNU6-976P-201ENST00000516086 111 ntBASIC2.42□□□□□ -2.02
LMO4P61968 Y_RNA.720-201ENST00000517166 92 ntBASIC2.42□□□□□ -2.02
LMO4P61968 RN7SKP295-201ENST00000517264 153 ntBASIC2.42□□□□□ -2.02
LMO4P61968 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.42□□□□□ -2.02
LMO4P61968 RNU6-988P-201ENST00000519081 107 ntBASIC2.42□□□□□ -2.02
LMO4P61968 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.42□□□□□ -2.02
LMO4P61968 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.42□□□□□ -2.02
LMO4P61968 CYCSP39-201ENST00000565821 309 ntBASIC2.42□□□□□ -2.02
LMO4P61968 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.42□□□□□ -2.02
LMO4P61968 AC100830.2-201ENST00000581636 240 ntBASIC2.42□□□□□ -2.02
LMO4P61968 AC174048.1-201ENST00000603389 144 ntBASIC2.42□□□□□ -2.02
LMO4P61968 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.42□□□□□ -2.02
LMO4P61968 AC004852.3-201ENST00000614131 326 ntBASIC2.42□□□□□ -2.02
LMO4P61968 AC133104.2-201ENST00000615272 193 ntBASIC2.42□□□□□ -2.02
LMO4P61968 MIR6128-201ENST00000615528 109 ntBASIC2.42□□□□□ -2.02
LMO4P61968 AC010205.1-201ENST00000616668 449 ntBASIC2.42□□□□□ -2.02
LMO4P61968 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.42□□□□□ -2.02
LMO4P61968 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
LMO4P61968 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LMO4P61968 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LMO4P61968 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.41□□□□□ -2.02
LMO4P61968 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LMO4P61968 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LMO4P61968 RNA5SP383-201ENST00000362934 120 ntBASIC2.41□□□□□ -2.02
LMO4P61968 RNU6-1303P-201ENST00000364841 107 ntBASIC2.41□□□□□ -2.02
LMO4P61968 SNORA9.2-201ENST00000365361 133 ntBASIC2.41□□□□□ -2.02
LMO4P61968 RNU6-128P-201ENST00000383976 107 ntBASIC2.41□□□□□ -2.02
LMO4P61968 RNU6-890P-201ENST00000384121 107 ntBASIC2.41□□□□□ -2.02
LMO4P61968 RNU6-574P-201ENST00000384265 107 ntBASIC2.41□□□□□ -2.02
LMO4P61968 RNU6-463P-201ENST00000384340 107 ntBASIC2.41□□□□□ -2.02
LMO4P61968 RNU6-817P-201ENST00000391083 104 ntBASIC2.41□□□□□ -2.02
LMO4P61968 RPS12P24-201ENST00000412619 387 ntBASIC2.41□□□□□ -2.02
LMO4P61968 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.41□□□□□ -2.02
LMO4P61968 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.41□□□□□ -2.02
LMO4P61968 AL160275.3-201ENST00000423876 471 ntBASIC2.41□□□□□ -2.02
LMO4P61968 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.41□□□□□ -2.02
LMO4P61968 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.41□□□□□ -2.02
LMO4P61968 AL035666.1-201ENST00000446195 348 ntBASIC2.41□□□□□ -2.02
LMO4P61968 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.41□□□□□ -2.02
LMO4P61968 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.41□□□□□ -2.02
LMO4P61968 RN7SL442P-201ENST00000473804 320 ntBASIC2.41□□□□□ -2.02
LMO4P61968 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.41□□□□□ -2.02
LMO4P61968 AC116337.1-201ENST00000509680 687 ntBASIC2.41□□□□□ -2.02
LMO4P61968 SNORA31.21-201ENST00000517180 77 ntBASIC2.41□□□□□ -2.02
LMO4P61968 RNU6-323P-201ENST00000521915 107 ntBASIC2.41□□□□□ -2.02
LMO4P61968 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LMO4P61968 MIR4680-201ENST00000580906 66 ntBASIC2.41□□□□□ -2.02
LMO4P61968 RPL12P50-201ENST00000603116 116 ntBASIC2.41□□□□□ -2.02
LMO4P61968 AC009229.3-201ENST00000608056 282 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms