Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.68□□□□□ -2.14
EIF3EP60228 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.68□□□□□ -2.14
EIF3EP60228 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.68□□□□□ -2.14
EIF3EP60228 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.68□□□□□ -2.14
EIF3EP60228 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.68□□□□□ -2.14
EIF3EP60228 CLIC4P2-201ENST00000601934 717 ntBASIC1.68□□□□□ -2.14
EIF3EP60228 DEFB131E-202ENST00000602581 683 ntBASIC1.68□□□□□ -2.14
EIF3EP60228 AL139286.2-201ENST00000606838 396 ntBASIC1.68□□□□□ -2.14
EIF3EP60228 AL451064.1-201ENST00000607718 471 ntBASIC1.68□□□□□ -2.14
EIF3EP60228 MIR7844-201ENST00000616161 122 ntBASIC1.68□□□□□ -2.14
EIF3EP60228 SCARNA4-202ENST00000625402 129 ntBASIC1.68□□□□□ -2.14
EIF3EP60228 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
EIF3EP60228 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.67□□□□□ -2.14
EIF3EP60228 AL356292.1-201ENST00000283110 373 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 Y_RNA.40-201ENST00000362645 93 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 RNU6-1274P-201ENST00000384557 107 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 MIR558-201ENST00000384920 94 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 RNU11-3P-201ENST00000391111 133 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 CISD1P1-201ENST00000393907 327 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 SRIP3-201ENST00000413200 219 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.67□□□□□ -2.14
EIF3EP60228 AL589872.1-201ENST00000426602 288 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 HMGN2P3-201ENST00000433603 273 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 AC119618.1-201ENST00000434191 222 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 HMGN2P5-201ENST00000436882 273 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 MTND5P2-201ENST00000442927 1142 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 AL360271.2-201ENST00000447710 161 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.67□□□□□ -2.14
EIF3EP60228 snoU13.14-201ENST00000459372 104 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.67□□□□□ -2.14
EIF3EP60228 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.67□□□□□ -2.14
EIF3EP60228 Y_RNA.687-201ENST00000516558 91 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 RN7SKP256-201ENST00000517201 314 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.67□□□□□ -2.14
EIF3EP60228 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.67□□□□□ -2.14
EIF3EP60228 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
EIF3EP60228 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.67□□□□□ -2.14
EIF3EP60228 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
EIF3EP60228 MIR3908-201ENST00000579798 126 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 AC011458.1-201ENST00000604034 617 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 AL158032.1-201ENST00000605401 106 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 MIR502-201ENST00000606349 86 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 AL136370.1-201ENST00000608166 691 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 AC009878.1-201ENST00000621819 340 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 AC090517.3-201ENST00000625170 141 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.67□□□□□ -2.14
EIF3EP60228 AC099654.13-201ENST00000639774 207 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 FARSBP1-201ENST00000435808 1778 ntBASIC1.67□□□□□ -2.14
EIF3EP60228 Y_RNA.22-201ENST00000362492 102 ntBASIC1.66□□□□□ -2.14
EIF3EP60228 SNORA24.1-201ENST00000384401 135 ntBASIC1.66□□□□□ -2.14
EIF3EP60228 SNORD116-20-201ENST00000384529 92 ntBASIC1.66□□□□□ -2.14
EIF3EP60228 RNU2-23P-201ENST00000410545 195 ntBASIC1.66□□□□□ -2.14
EIF3EP60228 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.66□□□□□ -2.14
EIF3EP60228 RPS20P15-201ENST00000412792 311 ntBASIC1.66□□□□□ -2.14
EIF3EP60228 EEF1A1P40-201ENST00000412883 573 ntBASIC1.66□□□□□ -2.14
EIF3EP60228 AL358453.1-201ENST00000422522 250 ntBASIC1.66□□□□□ -2.14
EIF3EP60228 MED13P1-201ENST00000428342 171 ntBASIC1.66□□□□□ -2.14
EIF3EP60228 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.66□□□□□ -2.14
EIF3EP60228 IFNA20P-201ENST00000436840 528 ntBASIC1.66□□□□□ -2.14
EIF3EP60228 RPS24P1-201ENST00000438550 371 ntBASIC1.66□□□□□ -2.14
EIF3EP60228 PRELID3BP1-201ENST00000457142 540 ntBASIC1.66□□□□□ -2.14
EIF3EP60228 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.66□□□□□ -2.14
EIF3EP60228 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.66□□□□□ -2.14
EIF3EP60228 TPT1P8-201ENST00000510120 555 ntBASIC1.66□□□□□ -2.14
EIF3EP60228 FAM206BP-201ENST00000510179 541 ntBASIC1.66□□□□□ -2.14
EIF3EP60228 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
EIF3EP60228 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.66□□□□□ -2.14
EIF3EP60228 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
EIF3EP60228 HMGN1P30-201ENST00000589286 268 ntBASIC1.66□□□□□ -2.14
EIF3EP60228 AC013412.1-201ENST00000610687 192 ntBASIC1.66□□□□□ -2.14
EIF3EP60228 RMST_6.1-201ENST00000611980 203 ntBASIC1.66□□□□□ -2.14
EIF3EP60228 AL132822.1-201ENST00000617063 513 ntBASIC1.66□□□□□ -2.14
EIF3EP60228 U6.42-201ENST00000618440 107 ntBASIC1.66□□□□□ -2.14
EIF3EP60228 AC022960.3-201ENST00000619794 441 ntBASIC1.66□□□□□ -2.14
EIF3EP60228 MTND4P23-201ENST00000447723 1363 ntBASIC1.66□□□□□ -2.14
EIF3EP60228 OR4G2P-201ENST00000328113 903 ntBASIC1.65□□□□□ -2.15
EIF3EP60228 RNU6-655P-201ENST00000362858 107 ntBASIC1.65□□□□□ -2.15
EIF3EP60228 RNU6-371P-201ENST00000364283 108 ntBASIC1.65□□□□□ -2.15
EIF3EP60228 RNU6-1179P-201ENST00000384667 107 ntBASIC1.65□□□□□ -2.15
EIF3EP60228 MIR30A-201ENST00000385092 71 ntBASIC1.65□□□□□ -2.15
EIF3EP60228 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
EIF3EP60228 AL627390.1-201ENST00000396055 340 ntBASIC1.65□□□□□ -2.15
EIF3EP60228 RNA5SP390-201ENST00000410191 113 ntBASIC1.65□□□□□ -2.15
EIF3EP60228 RNU2-39P-201ENST00000410604 198 ntBASIC1.65□□□□□ -2.15
EIF3EP60228 AC074117.2-201ENST00000417130 397 ntBASIC1.65□□□□□ -2.15
EIF3EP60228 BX510359.4-201ENST00000423750 193 ntBASIC1.65□□□□□ -2.15
EIF3EP60228 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.65□□□□□ -2.15
EIF3EP60228 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.65□□□□□ -2.15
EIF3EP60228 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.65□□□□□ -2.15
EIF3EP60228 PTP4A1P4-201ENST00000512479 322 ntBASIC1.65□□□□□ -2.15
EIF3EP60228 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.65□□□□□ -2.15
EIF3EP60228 SNORA43.2-201ENST00000516652 128 ntBASIC1.65□□□□□ -2.15
EIF3EP60228 RNU6-295P-201ENST00000516901 104 ntBASIC1.65□□□□□ -2.15
EIF3EP60228 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.65□□□□□ -2.15
EIF3EP60228 AP003392.2-201ENST00000527269 208 ntBASIC1.65□□□□□ -2.15
EIF3EP60228 AC022616.8-201ENST00000533569 253 ntBASIC1.65□□□□□ -2.15
EIF3EP60228 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.65□□□□□ -2.15
EIF3EP60228 AC008521.1-201ENST00000587471 187 ntBASIC1.65□□□□□ -2.15
EIF3EP60228 AC116312.1-201ENST00000606841 314 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms