Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 RNU6-278P-201ENST00000390945 109 ntBASIC0.87□□□□□ -2.27
AP3S2P59780 RNA5SP390-201ENST00000410191 113 ntBASIC0.87□□□□□ -2.27
AP3S2P59780 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.87□□□□□ -2.27
AP3S2P59780 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.87□□□□□ -2.27
AP3S2P59780 MTND4P15-201ENST00000437913 1033 ntBASIC0.87□□□□□ -2.27
AP3S2P59780 RPL32P28-201ENST00000443577 397 ntBASIC0.87□□□□□ -2.27
AP3S2P59780 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.87□□□□□ -2.27
AP3S2P59780 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
AP3S2P59780 ZNF886P-201ENST00000450781 723 ntBASIC0.87□□□□□ -2.27
AP3S2P59780 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
AP3S2P59780 snoU109.2-201ENST00000459316 135 ntBASIC0.87□□□□□ -2.27
AP3S2P59780 MTND1P16-201ENST00000465177 898 ntBASIC0.87□□□□□ -2.27
AP3S2P59780 RPL30P12-201ENST00000474666 353 ntBASIC0.87□□□□□ -2.27
AP3S2P59780 AL163195.1-201ENST00000496941 348 ntBASIC0.87□□□□□ -2.27
AP3S2P59780 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.87□□□□□ -2.27
AP3S2P59780 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.87□□□□□ -2.27
AP3S2P59780 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.87□□□□□ -2.27
AP3S2P59780 HMGB1P33-201ENST00000563485 527 ntBASIC0.87□□□□□ -2.27
AP3S2P59780 AC015688.6-201ENST00000577737 104 ntBASIC0.87□□□□□ -2.27
AP3S2P59780 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.87□□□□□ -2.27
AP3S2P59780 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.87□□□□□ -2.27
AP3S2P59780 AL158163.2-201ENST00000619110 700 ntBASIC0.87□□□□□ -2.27
AP3S2P59780 LINC02555-201ENST00000563933 1951 ntBASIC0.87□□□□□ -2.27
AP3S2P59780 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.86□□□□□ -2.27
AP3S2P59780 MIR520A-201ENST00000384862 85 ntBASIC0.86□□□□□ -2.27
AP3S2P59780 MTCO1P17-201ENST00000411522 491 ntBASIC0.86□□□□□ -2.27
AP3S2P59780 AL161935.2-201ENST00000414627 60 ntBASIC0.86□□□□□ -2.27
AP3S2P59780 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.86□□□□□ -2.27
AP3S2P59780 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.86□□□□□ -2.27
AP3S2P59780 PRPS1P1-201ENST00000445305 876 ntBASIC0.86□□□□□ -2.27
AP3S2P59780 AC132479.1-201ENST00000449160 144 ntBASIC0.86□□□□□ -2.27
AP3S2P59780 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.86□□□□□ -2.27
AP3S2P59780 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.86□□□□□ -2.27
AP3S2P59780 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
AP3S2P59780 AC119751.5-201ENST00000514077 770 ntBASIC0.86□□□□□ -2.27
AP3S2P59780 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.86□□□□□ -2.27
AP3S2P59780 DEFB108A-201ENST00000530110 222 ntBASIC0.86□□□□□ -2.27
AP3S2P59780 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.86□□□□□ -2.27
AP3S2P59780 MIR1273C-201ENST00000578669 77 ntBASIC0.86□□□□□ -2.27
AP3S2P59780 AL391646.1-201ENST00000603860 190 ntBASIC0.86□□□□□ -2.27
AP3S2P59780 AC025754.2-201ENST00000606491 432 ntBASIC0.86□□□□□ -2.27
AP3S2P59780 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.86□□□□□ -2.27
AP3S2P59780 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.86□□□□□ -2.27
AP3S2P59780 AC007792.1-201ENST00000623023 402 ntBASIC0.86□□□□□ -2.27
AP3S2P59780 AC009033.1-201ENST00000624279 431 ntBASIC0.86□□□□□ -2.27
AP3S2P59780 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.86□□□□□ -2.27
AP3S2P59780 RNU6-395P-201ENST00000365662 106 ntBASIC0.85□□□□□ -2.27
AP3S2P59780 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.85□□□□□ -2.27
AP3S2P59780 POLR2J4-204ENST00000418424 324 ntBASIC0.85□□□□□ -2.27
AP3S2P59780 AL590556.1-201ENST00000423231 483 ntBASIC0.85□□□□□ -2.27
AP3S2P59780 RPS27AP8-201ENST00000452665 445 ntBASIC0.85□□□□□ -2.27
AP3S2P59780 AL583843.1-201ENST00000456070 346 ntBASIC0.85□□□□□ -2.27
AP3S2P59780 MTND1P3-201ENST00000484956 952 ntBASIC0.85□□□□□ -2.27
AP3S2P59780 AC097473.1-201ENST00000508142 408 ntBASIC0.85□□□□□ -2.27
AP3S2P59780 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.85□□□□□ -2.27
AP3S2P59780 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.85□□□□□ -2.27
AP3S2P59780 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.85□□□□□ -2.27
AP3S2P59780 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.85□□□□□ -2.27
AP3S2P59780 MIR4421-201ENST00000578133 69 ntBASIC0.85□□□□□ -2.27
AP3S2P59780 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.85□□□□□ -2.27
AP3S2P59780 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.85□□□□□ -2.27
AP3S2P59780 AP003465.2-201ENST00000602571 373 ntBASIC0.85□□□□□ -2.27
AP3S2P59780 BNIP3P31-201ENST00000604515 566 ntBASIC0.85□□□□□ -2.27
AP3S2P59780 AC013412.1-201ENST00000610687 192 ntBASIC0.85□□□□□ -2.27
AP3S2P59780 RMST_4.1-201ENST00000616886 107 ntBASIC0.85□□□□□ -2.27
AP3S2P59780 AC027335.2-201ENST00000624030 375 ntBASIC0.85□□□□□ -2.27
AP3S2P59780 AC095038.3-201ENST00000634439 195 ntBASIC0.85□□□□□ -2.27
AP3S2P59780 MTND5P42-201ENST00000637720 498 ntBASIC0.85□□□□□ -2.27
AP3S2P59780 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
AP3S2P59780 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.85□□□□□ -2.27
AP3S2P59780 SNORA75B-201ENST00000384053 137 ntBASIC0.84□□□□□ -2.27
AP3S2P59780 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
AP3S2P59780 MIR1284-201ENST00000408337 120 ntBASIC0.84□□□□□ -2.27
AP3S2P59780 RPS15AP12-201ENST00000419498 388 ntBASIC0.84□□□□□ -2.27
AP3S2P59780 AL365338.1-201ENST00000422282 858 ntBASIC0.84□□□□□ -2.27
AP3S2P59780 AC013410.2-201ENST00000422627 201 ntBASIC0.84□□□□□ -2.27
AP3S2P59780 AC013262.1-201ENST00000426710 252 ntBASIC0.84□□□□□ -2.27
AP3S2P59780 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.84□□□□□ -2.27
AP3S2P59780 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.84□□□□□ -2.27
AP3S2P59780 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.84□□□□□ -2.27
AP3S2P59780 AC134050.1-201ENST00000495088 933 ntBASIC0.84□□□□□ -2.27
AP3S2P59780 AC008837.2-201ENST00000513076 418 ntBASIC0.84□□□□□ -2.27
AP3S2P59780 RNU6-914P-201ENST00000516749 109 ntBASIC0.84□□□□□ -2.27
AP3S2P59780 RNU6-1092P-201ENST00000516955 87 ntBASIC0.84□□□□□ -2.27
AP3S2P59780 AC084364.2-201ENST00000546924 395 ntBASIC0.84□□□□□ -2.27
AP3S2P59780 AL512310.8-201ENST00000550183 120 ntBASIC0.84□□□□□ -2.27
AP3S2P59780 DNAJC19P9-201ENST00000555084 351 ntBASIC0.84□□□□□ -2.27
AP3S2P59780 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.84□□□□□ -2.27
AP3S2P59780 MIR4661-201ENST00000582720 75 ntBASIC0.84□□□□□ -2.27
AP3S2P59780 SNORD114-21-201ENST00000606412 72 ntBASIC0.84□□□□□ -2.27
AP3S2P59780 BX284668.6-201ENST00000606899 438 ntBASIC0.84□□□□□ -2.27
AP3S2P59780 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
AP3S2P59780 AC130324.3-201ENST00000614165 542 ntBASIC0.84□□□□□ -2.27
AP3S2P59780 AP003485.1-201ENST00000625093 753 ntBASIC0.84□□□□□ -2.27
AP3S2P59780 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
AP3S2P59780 AC099654.8-201ENST00000637757 681 ntBASIC0.84□□□□□ -2.27
AP3S2P59780 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.83□□□□□ -2.28
AP3S2P59780 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
AP3S2P59780 AL589826.1-201ENST00000340697 249 ntBASIC0.83□□□□□ -2.28
AP3S2P59780 SNORA25-201ENST00000384384 134 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms