Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RTP1P59025 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RTP1P59025 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RTP1P59025 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
RTP1P59025 U3.6-201ENST00000363622 211 ntBASIC4.09□□□□□ -1.75
RTP1P59025 RNU6-173P-201ENST00000364215 104 ntBASIC4.09□□□□□ -1.75
RTP1P59025 Y_RNA.458-201ENST00000384240 102 ntBASIC4.09□□□□□ -1.75
RTP1P59025 MIR124-3-201ENST00000384866 87 ntBASIC4.09□□□□□ -1.75
RTP1P59025 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.09□□□□□ -1.75
RTP1P59025 MIR548H3-201ENST00000408771 118 ntBASIC4.09□□□□□ -1.75
RTP1P59025 MIR1183-201ENST00000408856 89 ntBASIC4.09□□□□□ -1.75
RTP1P59025 PIGPP3-201ENST00000425307 415 ntBASIC4.09□□□□□ -1.75
RTP1P59025 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.09□□□□□ -1.75
RTP1P59025 RBMY2UP-201ENST00000453474 324 ntBASIC4.09□□□□□ -1.75
RTP1P59025 AC079354.2-201ENST00000453523 154 ntBASIC4.09□□□□□ -1.75
RTP1P59025 SNORD108-201ENST00000459332 71 ntBASIC4.09□□□□□ -1.75
RTP1P59025 RNU6-182P-201ENST00000516970 105 ntBASIC4.09□□□□□ -1.75
RTP1P59025 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.09□□□□□ -1.75
RTP1P59025 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.09□□□□□ -1.75
RTP1P59025 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.09□□□□□ -1.75
RTP1P59025 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.09□□□□□ -1.75
RTP1P59025 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RTP1P59025 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RTP1P59025 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RTP1P59025 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.08□□□□□ -1.76
RTP1P59025 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTP1P59025 DEFB108F-201ENST00000344638 222 ntBASIC4.08□□□□□ -1.76
RTP1P59025 Y_RNA.27-201ENST00000362540 103 ntBASIC4.08□□□□□ -1.76
RTP1P59025 Y_RNA.237-201ENST00000364439 102 ntBASIC4.08□□□□□ -1.76
RTP1P59025 RNA5SP235-201ENST00000365411 114 ntBASIC4.08□□□□□ -1.76
RTP1P59025 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
RTP1P59025 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTP1P59025 Y_RNA.462-201ENST00000384268 102 ntBASIC4.08□□□□□ -1.76
RTP1P59025 HMGN2P8-201ENST00000391458 268 ntBASIC4.08□□□□□ -1.76
RTP1P59025 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTP1P59025 MIR548M-201ENST00000408260 86 ntBASIC4.08□□□□□ -1.76
RTP1P59025 Y_RNA.623-201ENST00000411128 95 ntBASIC4.08□□□□□ -1.76
RTP1P59025 Z85995.1-201ENST00000415547 335 ntBASIC4.08□□□□□ -1.76
RTP1P59025 SDAD1P3-201ENST00000427380 333 ntBASIC4.08□□□□□ -1.76
RTP1P59025 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RTP1P59025 RPL21P13-201ENST00000488305 481 ntBASIC4.08□□□□□ -1.76
RTP1P59025 AC010469.2-201ENST00000496412 480 ntBASIC4.08□□□□□ -1.76
RTP1P59025 MLLT10P2-201ENST00000506434 249 ntBASIC4.08□□□□□ -1.76
RTP1P59025 AC067942.3-201ENST00000512025 362 ntBASIC4.08□□□□□ -1.76
RTP1P59025 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.08□□□□□ -1.76
RTP1P59025 AL590705.4-201ENST00000532209 134 ntBASIC4.08□□□□□ -1.76
RTP1P59025 AC110741.2-201ENST00000605278 268 ntBASIC4.08□□□□□ -1.76
RTP1P59025 AL161629.2-201ENST00000615347 275 ntBASIC4.08□□□□□ -1.76
RTP1P59025 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.08□□□□□ -1.76
RTP1P59025 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RTP1P59025 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RTP1P59025 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RTP1P59025 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
RTP1P59025 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RTP1P59025 MIR335-201ENST00000362173 94 ntBASIC4.07□□□□□ -1.76
RTP1P59025 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.07□□□□□ -1.76
RTP1P59025 RHEBP3-201ENST00000411920 351 ntBASIC4.07□□□□□ -1.76
RTP1P59025 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.07□□□□□ -1.76
RTP1P59025 MTND3P9-201ENST00000429526 346 ntBASIC4.07□□□□□ -1.76
RTP1P59025 MTCO3P29-201ENST00000432119 779 ntBASIC4.07□□□□□ -1.76
RTP1P59025 RPS6P12-201ENST00000432491 726 ntBASIC4.07□□□□□ -1.76
RTP1P59025 AL139109.1-201ENST00000455491 297 ntBASIC4.07□□□□□ -1.76
RTP1P59025 RPS29P27-201ENST00000463711 170 ntBASIC4.07□□□□□ -1.76
RTP1P59025 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.07□□□□□ -1.76
RTP1P59025 RNU6-406P-201ENST00000516470 107 ntBASIC4.07□□□□□ -1.76
RTP1P59025 SNORA70.18-201ENST00000516696 98 ntBASIC4.07□□□□□ -1.76
RTP1P59025 RNU6-612P-201ENST00000516909 102 ntBASIC4.07□□□□□ -1.76
RTP1P59025 SNORA31.20-201ENST00000517111 133 ntBASIC4.07□□□□□ -1.76
RTP1P59025 AC025755.1-201ENST00000521306 278 ntBASIC4.07□□□□□ -1.76
RTP1P59025 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.07□□□□□ -1.76
RTP1P59025 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.07□□□□□ -1.76
RTP1P59025 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.07□□□□□ -1.76
RTP1P59025 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.07□□□□□ -1.76
RTP1P59025 AC008121.1-201ENST00000603244 268 ntBASIC4.07□□□□□ -1.76
RTP1P59025 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RTP1P59025 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
RTP1P59025 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.07□□□□□ -1.76
RTP1P59025 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RTP1P59025 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
RTP1P59025 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.07□□□□□ -1.76
RTP1P59025 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RTP1P59025 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RTP1P59025 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RTP1P59025 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RTP1P59025 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RTP1P59025 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RTP1P59025 snoU2_19.2-201ENST00000363024 80 ntBASIC4.06□□□□□ -1.76
RTP1P59025 Y_RNA.555-201ENST00000384673 110 ntBASIC4.06□□□□□ -1.76
RTP1P59025 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RTP1P59025 MIR190B-201ENST00000401119 79 ntBASIC4.06□□□□□ -1.76
RTP1P59025 MTHFD2P2-201ENST00000407725 247 ntBASIC4.06□□□□□ -1.76
RTP1P59025 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RTP1P59025 AC244098.2-201ENST00000422068 99 ntBASIC4.06□□□□□ -1.76
RTP1P59025 AC096920.1-201ENST00000423991 241 ntBASIC4.06□□□□□ -1.76
RTP1P59025 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RTP1P59025 AL627311.1-201ENST00000431514 115 ntBASIC4.06□□□□□ -1.76
RTP1P59025 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.06□□□□□ -1.76
RTP1P59025 AC013470.1-201ENST00000453438 462 ntBASIC4.06□□□□□ -1.76
RTP1P59025 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.06□□□□□ -1.76
RTP1P59025 RPS20P22-201ENST00000473700 357 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms