Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RNU6-43P-201ENST00000384302 107 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 U3.26-201ENST00000391236 204 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 SAR1AP2-201ENST00000392696 594 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 RNA5SP44-201ENST00000410446 133 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 RPL23AP95-201ENST00000426806 265 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 AC091286.1-201ENST00000431233 461 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.14□□□□□ -1.91
SUMO3P55854 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.14□□□□□ -1.91
SUMO3P55854 RPL39P29-201ENST00000447779 157 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 MTCO3P10-201ENST00000455912 772 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 RPS29P12-201ENST00000460178 152 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 AP001324.2-201ENST00000461163 319 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 AC006445.1-201ENST00000491925 405 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.14□□□□□ -1.91
SUMO3P55854 MTND4LP22-201ENST00000508209 276 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.14□□□□□ -1.91
SUMO3P55854 AC110768.1-201ENST00000509222 400 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 FCF1P8-201ENST00000510322 597 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 RNU6-1170P-201ENST00000515974 106 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 AC107934.2-201ENST00000518653 310 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 AC109329.1-201ENST00000518744 317 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.14□□□□□ -1.91
SUMO3P55854 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.14□□□□□ -1.91
SUMO3P55854 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.14□□□□□ -1.91
SUMO3P55854 AC105137.2-201ENST00000569073 466 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 AC011471.1-201ENST00000585766 187 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.14□□□□□ -1.91
SUMO3P55854 AL133393.1-201ENST00000603277 287 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
SUMO3P55854 MTND5P10-201ENST00000603719 1809 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.14□□□□□ -1.91
SUMO3P55854 AL109809.4-201ENST00000603520 2185 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SUMO3P55854 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
SUMO3P55854 AC002543.1-201ENST00000299783 1954 ntBASIC3.13□□□□□ -1.91
SUMO3P55854 MIR423-201ENST00000362201 94 ntBASIC3.13□□□□□ -1.91
SUMO3P55854 RNU6-1010P-201ENST00000362757 107 ntBASIC3.13□□□□□ -1.91
SUMO3P55854 SNORA73.2-201ENST00000364946 201 ntBASIC3.13□□□□□ -1.91
SUMO3P55854 RNU1-140P-201ENST00000365040 165 ntBASIC3.13□□□□□ -1.91
SUMO3P55854 MIR449B-201ENST00000384995 97 ntBASIC3.13□□□□□ -1.91
SUMO3P55854 Y_RNA.579-201ENST00000390939 94 ntBASIC3.13□□□□□ -1.91
SUMO3P55854 SNORA75.6-201ENST00000391318 127 ntBASIC3.13□□□□□ -1.91
SUMO3P55854 EI24P2-201ENST00000397776 1076 ntBASIC3.13□□□□□ -1.91
SUMO3P55854 AL133475.1-201ENST00000404414 305 ntBASIC3.13□□□□□ -1.91
SUMO3P55854 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.13□□□□□ -1.91
SUMO3P55854 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.13□□□□□ -1.91
SUMO3P55854 GOT2P5-201ENST00000433995 546 ntBASIC3.13□□□□□ -1.91
SUMO3P55854 RPS4XP2-201ENST00000458402 793 ntBASIC3.13□□□□□ -1.91
SUMO3P55854 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.13□□□□□ -1.91
SUMO3P55854 AC005741.1-201ENST00000511094 432 ntBASIC3.13□□□□□ -1.91
SUMO3P55854 MRPS36P2-201ENST00000512569 299 ntBASIC3.13□□□□□ -1.91
SUMO3P55854 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.13□□□□□ -1.91
SUMO3P55854 SCARNA11.3-201ENST00000517276 130 ntBASIC3.13□□□□□ -1.91
SUMO3P55854 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.13□□□□□ -1.91
SUMO3P55854 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.13□□□□□ -1.91
SUMO3P55854 MIR3158-1-201ENST00000583596 81 ntBASIC3.13□□□□□ -1.91
SUMO3P55854 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.13□□□□□ -1.91
SUMO3P55854 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.13□□□□□ -1.91
SUMO3P55854 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SUMO3P55854 AL513302.2-201ENST00000562313 1842 ntBASIC3.13□□□□□ -1.91
SUMO3P55854 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SUMO3P55854 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.13□□□□□ -1.91
SUMO3P55854 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.13□□□□□ -1.91
SUMO3P55854 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SUMO3P55854 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SUMO3P55854 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SUMO3P55854 AC009541.1-201ENST00000438279 2662 ntBASIC3.13□□□□□ -1.91
SUMO3P55854 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SUMO3P55854 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SUMO3P55854 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SUMO3P55854 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.12□□□□□ -1.91
SUMO3P55854 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SUMO3P55854 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.12□□□□□ -1.91
SUMO3P55854 SNORD114-19-201ENST00000363072 75 ntBASIC3.12□□□□□ -1.91
SUMO3P55854 RNU6-1083P-201ENST00000384022 107 ntBASIC3.12□□□□□ -1.91
SUMO3P55854 SNORA41-201ENST00000384675 132 ntBASIC3.12□□□□□ -1.91
SUMO3P55854 RNU6-331P-201ENST00000384724 107 ntBASIC3.12□□□□□ -1.91
SUMO3P55854 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.12□□□□□ -1.91
SUMO3P55854 TRIAP1P1-201ENST00000427062 225 ntBASIC3.12□□□□□ -1.91
SUMO3P55854 MTND1P14-201ENST00000427400 950 ntBASIC3.12□□□□□ -1.91
SUMO3P55854 AC078809.1-201ENST00000427601 140 ntBASIC3.12□□□□□ -1.91
SUMO3P55854 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.12□□□□□ -1.91
SUMO3P55854 CENPBD1P1-201ENST00000464061 469 ntBASIC3.12□□□□□ -1.91
SUMO3P55854 FTH1P2-201ENST00000466086 412 ntBASIC3.12□□□□□ -1.91
SUMO3P55854 RPL30P12-201ENST00000474666 353 ntBASIC3.12□□□□□ -1.91
SUMO3P55854 RPS26P21-201ENST00000475397 348 ntBASIC3.12□□□□□ -1.91
SUMO3P55854 AC093303.1-201ENST00000514549 295 ntBASIC3.12□□□□□ -1.91
SUMO3P55854 RNA5SP384-201ENST00000516615 116 ntBASIC3.12□□□□□ -1.91
SUMO3P55854 Y_RNA.701-201ENST00000516812 110 ntBASIC3.12□□□□□ -1.91
SUMO3P55854 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.12□□□□□ -1.91
SUMO3P55854 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.12□□□□□ -1.91
SUMO3P55854 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.12□□□□□ -1.91
SUMO3P55854 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.12□□□□□ -1.91
SUMO3P55854 MIR5696-201ENST00000578474 85 ntBASIC3.12□□□□□ -1.91
SUMO3P55854 MIR4425-201ENST00000580572 84 ntBASIC3.12□□□□□ -1.91
SUMO3P55854 AC044792.1-201ENST00000593294 196 ntBASIC3.12□□□□□ -1.91
SUMO3P55854 AC080078.3-201ENST00000605407 463 ntBASIC3.12□□□□□ -1.91
SUMO3P55854 AC006133.1-201ENST00000617106 264 ntBASIC3.12□□□□□ -1.91
SUMO3P55854 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.12□□□□□ -1.91
SUMO3P55854 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms