Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RMST_7.1-201ENST00000621935 268 ntBASIC2.01□□□□□ -2.09
LIM2P55344 ZNF680P1-201ENST00000436625 1469 ntBASIC2.01□□□□□ -2.09
LIM2P55344 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
LIM2P55344 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2□□□□□ -2.09
LIM2P55344 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2□□□□□ -2.09
LIM2P55344 SNORD114-19-201ENST00000363072 75 ntBASIC2□□□□□ -2.09
LIM2P55344 RNA5SP393-201ENST00000363423 117 ntBASIC2□□□□□ -2.09
LIM2P55344 Y_RNA.159-201ENST00000363674 87 ntBASIC2□□□□□ -2.09
LIM2P55344 RNU6-715P-201ENST00000365204 103 ntBASIC2□□□□□ -2.09
LIM2P55344 RNA5SP240-201ENST00000365355 128 ntBASIC2□□□□□ -2.09
LIM2P55344 RNU6-622P-201ENST00000384272 103 ntBASIC2□□□□□ -2.09
LIM2P55344 RNU6-517P-201ENST00000384362 110 ntBASIC2□□□□□ -2.09
LIM2P55344 MIR218-1-201ENST00000384999 110 ntBASIC2□□□□□ -2.09
LIM2P55344 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2□□□□□ -2.09
LIM2P55344 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2□□□□□ -2.09
LIM2P55344 DPH3P2-201ENST00000422618 250 ntBASIC2□□□□□ -2.09
LIM2P55344 AL669831.1-202ENST00000428504 417 ntBASIC2□□□□□ -2.09
LIM2P55344 SUMO1P4-201ENST00000429430 302 ntBASIC2□□□□□ -2.09
LIM2P55344 AC000111.3-201ENST00000433478 193 ntBASIC2□□□□□ -2.09
LIM2P55344 GTF2IP13-201ENST00000438487 386 ntBASIC2□□□□□ -2.09
LIM2P55344 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2□□□□□ -2.09
LIM2P55344 AC096638.1-201ENST00000444678 216 ntBASIC2□□□□□ -2.09
LIM2P55344 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2□□□□□ -2.09
LIM2P55344 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2□□□□□ -2.09
LIM2P55344 RPS29P15-201ENST00000458329 171 ntBASIC2□□□□□ -2.09
LIM2P55344 RPL9P6-201ENST00000492764 598 ntBASIC2□□□□□ -2.09
LIM2P55344 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2□□□□□ -2.09
LIM2P55344 AC117522.2-201ENST00000510049 657 ntBASIC2□□□□□ -2.09
LIM2P55344 Y_RNA.687-201ENST00000516558 91 ntBASIC2□□□□□ -2.09
LIM2P55344 SNORA43.2-201ENST00000516652 128 ntBASIC2□□□□□ -2.09
LIM2P55344 RNU1-104P-201ENST00000517280 175 ntBASIC2□□□□□ -2.09
LIM2P55344 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2□□□□□ -2.09
LIM2P55344 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2□□□□□ -2.09
LIM2P55344 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2□□□□□ -2.09
LIM2P55344 PSMA3P-201ENST00000555485 635 ntBASIC2□□□□□ -2.09
LIM2P55344 AL133241.1-201ENST00000556832 487 ntBASIC2□□□□□ -2.09
LIM2P55344 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2□□□□□ -2.09
LIM2P55344 BNIP3P30-201ENST00000601184 574 ntBASIC2□□□□□ -2.09
LIM2P55344 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
LIM2P55344 AC026585.1-201ENST00000619582 524 ntBASIC2□□□□□ -2.09
LIM2P55344 AC022418.1-201ENST00000624118 445 ntBASIC2□□□□□ -2.09
LIM2P55344 AP000553.5-201ENST00000641933 54 ntBASIC2□□□□□ -2.09
LIM2P55344 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2□□□□□ -2.09
LIM2P55344 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2□□□□□ -2.09
LIM2P55344 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
LIM2P55344 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
LIM2P55344 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2□□□□□ -2.09
LIM2P55344 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
LIM2P55344 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
LIM2P55344 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2□□□□□ -2.09
LIM2P55344 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.99□□□□□ -2.09
LIM2P55344 Z82209.1-201ENST00000422141 2135 ntBASIC1.99□□□□□ -2.09
LIM2P55344 RBBP8P1-201ENST00000449447 1844 ntBASIC1.99□□□□□ -2.09
LIM2P55344 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.99□□□□□ -2.09
LIM2P55344 RNU6-858P-201ENST00000362436 107 ntBASIC1.99□□□□□ -2.09
LIM2P55344 RNU6-529P-201ENST00000363383 104 ntBASIC1.99□□□□□ -2.09
LIM2P55344 SNORA38-201ENST00000363946 132 ntBASIC1.99□□□□□ -2.09
LIM2P55344 Y_RNA.399-201ENST00000383955 105 ntBASIC1.99□□□□□ -2.09
LIM2P55344 RNU6-434P-201ENST00000384376 107 ntBASIC1.99□□□□□ -2.09
LIM2P55344 SNORA64-201ENST00000384674 134 ntBASIC1.99□□□□□ -2.09
LIM2P55344 MIR95-201ENST00000385072 81 ntBASIC1.99□□□□□ -2.09
LIM2P55344 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
LIM2P55344 DEFB108C-201ENST00000400154 252 ntBASIC1.99□□□□□ -2.09
LIM2P55344 AL023284.1-201ENST00000403956 276 ntBASIC1.99□□□□□ -2.09
LIM2P55344 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.99□□□□□ -2.09
LIM2P55344 RN7SKP32-201ENST00000410167 303 ntBASIC1.99□□□□□ -2.09
LIM2P55344 RNU2-63P-201ENST00000410792 194 ntBASIC1.99□□□□□ -2.09
LIM2P55344 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.99□□□□□ -2.09
LIM2P55344 CYCSP33-201ENST00000414485 327 ntBASIC1.99□□□□□ -2.09
LIM2P55344 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.99□□□□□ -2.09
LIM2P55344 EIF4EP4-201ENST00000424916 578 ntBASIC1.99□□□□□ -2.09
LIM2P55344 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
LIM2P55344 AC016691.1-201ENST00000441321 413 ntBASIC1.99□□□□□ -2.09
LIM2P55344 RPL7P12-201ENST00000446719 750 ntBASIC1.99□□□□□ -2.09
LIM2P55344 RPL23AP7-203ENST00000449021 469 ntBASIC1.99□□□□□ -2.09
LIM2P55344 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.99□□□□□ -2.09
LIM2P55344 CYP2C59P-201ENST00000457790 269 ntBASIC1.99□□□□□ -2.09
LIM2P55344 MTND3P25-201ENST00000509243 135 ntBASIC1.99□□□□□ -2.09
LIM2P55344 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.99□□□□□ -2.09
LIM2P55344 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.99□□□□□ -2.09
LIM2P55344 AP005435.4-201ENST00000529514 284 ntBASIC1.99□□□□□ -2.09
LIM2P55344 AC025678.1-201ENST00000567861 338 ntBASIC1.99□□□□□ -2.09
LIM2P55344 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.99□□□□□ -2.09
LIM2P55344 MIR4446-201ENST00000578505 67 ntBASIC1.99□□□□□ -2.09
LIM2P55344 AP005136.1-201ENST00000579765 429 ntBASIC1.99□□□□□ -2.09
LIM2P55344 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.99□□□□□ -2.09
LIM2P55344 MIR3611-201ENST00000584484 83 ntBASIC1.99□□□□□ -2.09
LIM2P55344 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.99□□□□□ -2.09
LIM2P55344 NDUFA8P1-201ENST00000605525 367 ntBASIC1.99□□□□□ -2.09
LIM2P55344 AC098614.4-201ENST00000607601 462 ntBASIC1.99□□□□□ -2.09
LIM2P55344 AC009090.3-201ENST00000616553 565 ntBASIC1.99□□□□□ -2.09
LIM2P55344 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.99□□□□□ -2.09
LIM2P55344 MIR5739-201ENST00000619803 80 ntBASIC1.99□□□□□ -2.09
LIM2P55344 Z69720.2-201ENST00000624755 279 ntBASIC1.99□□□□□ -2.09
LIM2P55344 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.99□□□□□ -2.09
LIM2P55344 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.99□□□□□ -2.09
LIM2P55344 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
LIM2P55344 Y_RNA.296-201ENST00000364930 108 ntBASIC1.98□□□□□ -2.09
LIM2P55344 RNU6-393P-201ENST00000384475 107 ntBASIC1.98□□□□□ -2.09
LIM2P55344 RNU1-57P-201ENST00000384491 166 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms