Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RNU6-16P-201ENST00000384385 107 ntBASIC2.55□□□□□ -2
CDH13P55290 RNU6-15P-201ENST00000384534 107 ntBASIC2.55□□□□□ -2
CDH13P55290 RNU6-2-201ENST00000384627 107 ntBASIC2.55□□□□□ -2
CDH13P55290 RNU6-29P-201ENST00000384637 107 ntBASIC2.55□□□□□ -2
CDH13P55290 RNU6-9-201ENST00000384776 107 ntBASIC2.55□□□□□ -2
CDH13P55290 RNU6-33P-201ENST00000384793 107 ntBASIC2.55□□□□□ -2
CDH13P55290 RNU6-192P-201ENST00000391253 100 ntBASIC2.55□□□□□ -2
CDH13P55290 POLHP1-201ENST00000411806 470 ntBASIC2.55□□□□□ -2
CDH13P55290 SNORD56-201ENST00000413522 71 ntBASIC2.55□□□□□ -2
CDH13P55290 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.55□□□□□ -2
CDH13P55290 USP9YP20-201ENST00000419224 558 ntBASIC2.55□□□□□ -2
CDH13P55290 MTCO1P20-201ENST00000425366 358 ntBASIC2.55□□□□□ -2
CDH13P55290 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.55□□□□□ -2
CDH13P55290 AC011816.1-201ENST00000441346 546 ntBASIC2.55□□□□□ -2
CDH13P55290 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.55□□□□□ -2
CDH13P55290 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.55□□□□□ -2
CDH13P55290 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.55□□□□□ -2
CDH13P55290 MTND3P16-201ENST00000452205 344 ntBASIC2.55□□□□□ -2
CDH13P55290 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.55□□□□□ -2
CDH13P55290 RPL23AP45-201ENST00000476406 468 ntBASIC2.55□□□□□ -2
CDH13P55290 AP001025.1-201ENST00000486139 332 ntBASIC2.55□□□□□ -2
CDH13P55290 Y_RNA.654-201ENST00000497848 106 ntBASIC2.55□□□□□ -2
CDH13P55290 AIG1P1-201ENST00000503376 148 ntBASIC2.55□□□□□ -2
CDH13P55290 SNORA14.1-201ENST00000516113 141 ntBASIC2.55□□□□□ -2
CDH13P55290 RNU6-189P-201ENST00000516120 101 ntBASIC2.55□□□□□ -2
CDH13P55290 MTND1P5-201ENST00000517906 940 ntBASIC2.55□□□□□ -2
CDH13P55290 CKS1BP7-201ENST00000522230 235 ntBASIC2.55□□□□□ -2
CDH13P55290 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.55□□□□□ -2
CDH13P55290 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.55□□□□□ -2
CDH13P55290 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.55□□□□□ -2
CDH13P55290 MIR3199-1-201ENST00000582434 88 ntBASIC2.55□□□□□ -2
CDH13P55290 RPL12P50-201ENST00000603116 116 ntBASIC2.55□□□□□ -2
CDH13P55290 APOOP1-201ENST00000604695 592 ntBASIC2.55□□□□□ -2
CDH13P55290 ATP1B3P1-201ENST00000605365 821 ntBASIC2.55□□□□□ -2
CDH13P55290 RNU6-6P-201ENST00000606623 107 ntBASIC2.55□□□□□ -2
CDH13P55290 AC004492.1-201ENST00000607036 742 ntBASIC2.55□□□□□ -2
CDH13P55290 AC093732.2-201ENST00000607950 274 ntBASIC2.55□□□□□ -2
CDH13P55290 AC069294.1-201ENST00000608397 350 ntBASIC2.55□□□□□ -2
CDH13P55290 AC122108.2-201ENST00000611946 526 ntBASIC2.55□□□□□ -2
CDH13P55290 FO624990.1-201ENST00000636373 85 ntBASIC2.55□□□□□ -2
CDH13P55290 MIR6073-201ENST00000352083 89 ntBASIC2.54□□□□□ -2
CDH13P55290 SNORD114-19-201ENST00000363072 75 ntBASIC2.54□□□□□ -2
CDH13P55290 Y_RNA.554-201ENST00000384672 102 ntBASIC2.54□□□□□ -2
CDH13P55290 MIR128-1-201ENST00000384921 82 ntBASIC2.54□□□□□ -2
CDH13P55290 RNU6-1068P-201ENST00000410958 103 ntBASIC2.54□□□□□ -2
CDH13P55290 SNRPEP10-201ENST00000420249 274 ntBASIC2.54□□□□□ -2
CDH13P55290 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.54□□□□□ -2
CDH13P55290 RPL30P4-201ENST00000429309 333 ntBASIC2.54□□□□□ -2
CDH13P55290 AC013470.1-201ENST00000453438 462 ntBASIC2.54□□□□□ -2
CDH13P55290 AC117503.1-201ENST00000472241 394 ntBASIC2.54□□□□□ -2
CDH13P55290 RPL21P99-201ENST00000480369 423 ntBASIC2.54□□□□□ -2
CDH13P55290 SRIP1-201ENST00000489235 288 ntBASIC2.54□□□□□ -2
CDH13P55290 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.54□□□□□ -2
CDH13P55290 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.54□□□□□ -2
CDH13P55290 AC138761.3-201ENST00000579993 334 ntBASIC2.54□□□□□ -2
CDH13P55290 AC105245.1-201ENST00000581934 244 ntBASIC2.54□□□□□ -2
CDH13P55290 VN1R80P-201ENST00000597126 338 ntBASIC2.54□□□□□ -2
CDH13P55290 AC080078.2-201ENST00000603766 501 ntBASIC2.54□□□□□ -2
CDH13P55290 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.54□□□□□ -2
CDH13P55290 AC135776.4-201ENST00000624300 1904 ntBASIC2.53□□□□□ -2
CDH13P55290 OR56A5-201ENST00000340110 738 ntBASIC2.53□□□□□ -2
CDH13P55290 Y_RNA.231-201ENST00000364358 102 ntBASIC2.53□□□□□ -2
CDH13P55290 DEFA7P-201ENST00000382676 285 ntBASIC2.53□□□□□ -2
CDH13P55290 RNU6-220P-201ENST00000390919 107 ntBASIC2.53□□□□□ -2
CDH13P55290 SNORA48.2-201ENST00000390926 124 ntBASIC2.53□□□□□ -2
CDH13P55290 RNA5SP219-201ENST00000390940 113 ntBASIC2.53□□□□□ -2
CDH13P55290 MTCO1P21-201ENST00000416634 589 ntBASIC2.53□□□□□ -2
CDH13P55290 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.53□□□□□ -2
CDH13P55290 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.53□□□□□ -2
CDH13P55290 USP9YP18-201ENST00000425912 695 ntBASIC2.53□□□□□ -2
CDH13P55290 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.53□□□□□ -2
CDH13P55290 RNU6-1208P-201ENST00000459588 107 ntBASIC2.53□□□□□ -2
CDH13P55290 AC096576.1-201ENST00000489014 359 ntBASIC2.53□□□□□ -2
CDH13P55290 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.53□□□□□ -2
CDH13P55290 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.53□□□□□ -2
CDH13P55290 RNU6-377P-201ENST00000515965 102 ntBASIC2.53□□□□□ -2
CDH13P55290 AC109329.2-201ENST00000519658 482 ntBASIC2.53□□□□□ -2
CDH13P55290 AC010186.2-204ENST00000537668 439 ntBASIC2.53□□□□□ -2
CDH13P55290 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.53□□□□□ -2
CDH13P55290 AC090897.2-201ENST00000581715 130 ntBASIC2.53□□□□□ -2
CDH13P55290 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.53□□□□□ -2
CDH13P55290 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.53□□□□□ -2
CDH13P55290 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.53□□□□□ -2
CDH13P55290 AC005000.2-201ENST00000605468 310 ntBASIC2.53□□□□□ -2
CDH13P55290 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.53□□□□□ -2
CDH13P55290 AL137790.1-201ENST00000634283 177 ntBASIC2.53□□□□□ -2
CDH13P55290 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.53□□□□□ -2
CDH13P55290 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.53□□□□□ -2
CDH13P55290 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CDH13P55290 AC121333.1-201ENST00000567488 2709 ntBASIC2.53□□□□□ -2
CDH13P55290 OR4G1P-203ENST00000641984 1631 ntBASIC2.53□□□□□ -2
CDH13P55290 Y_RNA.450-201ENST00000384198 113 ntBASIC2.52□□□□□ -2.01
CDH13P55290 Y_RNA.573-201ENST00000384763 105 ntBASIC2.52□□□□□ -2.01
CDH13P55290 AL133475.1-201ENST00000404414 305 ntBASIC2.52□□□□□ -2.01
CDH13P55290 AF274854.1-201ENST00000413236 615 ntBASIC2.52□□□□□ -2.01
CDH13P55290 NUP35P1-201ENST00000422734 947 ntBASIC2.52□□□□□ -2.01
CDH13P55290 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.52□□□□□ -2.01
CDH13P55290 RPS3AP44-201ENST00000425466 790 ntBASIC2.52□□□□□ -2.01
CDH13P55290 AL591043.1-201ENST00000432461 424 ntBASIC2.52□□□□□ -2.01
CDH13P55290 AC112771.1-201ENST00000463581 102 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms