Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 CBX3P9-201ENST00000402326 552 ntBASIC1.73□□□□□ -2.13
CDH6P55285 RNU2-23P-201ENST00000410545 195 ntBASIC1.73□□□□□ -2.13
CDH6P55285 Y_RNA.608-201ENST00000410647 95 ntBASIC1.73□□□□□ -2.13
CDH6P55285 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.73□□□□□ -2.13
CDH6P55285 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.73□□□□□ -2.13
CDH6P55285 AC011233.1-201ENST00000422812 283 ntBASIC1.73□□□□□ -2.13
CDH6P55285 AL593851.1-201ENST00000426171 157 ntBASIC1.73□□□□□ -2.13
CDH6P55285 AL512286.1-201ENST00000439244 400 ntBASIC1.73□□□□□ -2.13
CDH6P55285 snoU13.14-201ENST00000459372 104 ntBASIC1.73□□□□□ -2.13
CDH6P55285 RN7SKP256-201ENST00000517201 314 ntBASIC1.73□□□□□ -2.13
CDH6P55285 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.73□□□□□ -2.13
CDH6P55285 EEF1A1P37-201ENST00000522748 715 ntBASIC1.73□□□□□ -2.13
CDH6P55285 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.73□□□□□ -2.13
CDH6P55285 AP003392.2-201ENST00000527269 208 ntBASIC1.73□□□□□ -2.13
CDH6P55285 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.73□□□□□ -2.13
CDH6P55285 AC008751.2-201ENST00000597885 980 ntBASIC1.73□□□□□ -2.13
CDH6P55285 AL031775.1-201ENST00000607014 887 ntBASIC1.73□□□□□ -2.13
CDH6P55285 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
CDH6P55285 AC027807.2-201ENST00000616099 408 ntBASIC1.73□□□□□ -2.13
CDH6P55285 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CDH6P55285 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CDH6P55285 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.72□□□□□ -2.13
CDH6P55285 SNORD115-3-201ENST00000363100 82 ntBASIC1.72□□□□□ -2.13
CDH6P55285 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
CDH6P55285 RNA5SP212-201ENST00000391223 107 ntBASIC1.72□□□□□ -2.13
CDH6P55285 MRPL42P2-201ENST00000403169 426 ntBASIC1.72□□□□□ -2.13
CDH6P55285 AC114491.1-201ENST00000416095 246 ntBASIC1.72□□□□□ -2.13
CDH6P55285 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.72□□□□□ -2.13
CDH6P55285 ELOCP4-201ENST00000420090 333 ntBASIC1.72□□□□□ -2.13
CDH6P55285 USP9YP18-201ENST00000425912 695 ntBASIC1.72□□□□□ -2.13
CDH6P55285 MTND5P2-201ENST00000442927 1142 ntBASIC1.72□□□□□ -2.13
CDH6P55285 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.72□□□□□ -2.13
CDH6P55285 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.72□□□□□ -2.13
CDH6P55285 AC108078.2-201ENST00000510750 236 ntBASIC1.72□□□□□ -2.13
CDH6P55285 AC117532.1-201ENST00000514638 323 ntBASIC1.72□□□□□ -2.13
CDH6P55285 RNU6-123P-201ENST00000516163 102 ntBASIC1.72□□□□□ -2.13
CDH6P55285 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
CDH6P55285 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
CDH6P55285 HSBP1P1-201ENST00000555205 166 ntBASIC1.72□□□□□ -2.13
CDH6P55285 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.72□□□□□ -2.13
CDH6P55285 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.72□□□□□ -2.13
CDH6P55285 CLIC4P2-201ENST00000601934 717 ntBASIC1.72□□□□□ -2.13
CDH6P55285 AC025811.1-201ENST00000604312 472 ntBASIC1.72□□□□□ -2.13
CDH6P55285 MIR502-201ENST00000606349 86 ntBASIC1.72□□□□□ -2.13
CDH6P55285 AC116312.1-201ENST00000606841 314 ntBASIC1.72□□□□□ -2.13
CDH6P55285 AC012360.2-201ENST00000609349 391 ntBASIC1.72□□□□□ -2.13
CDH6P55285 AL050303.3-201ENST00000613704 284 ntBASIC1.72□□□□□ -2.13
CDH6P55285 AC091834.1-201ENST00000614543 472 ntBASIC1.72□□□□□ -2.13
CDH6P55285 AC092140.2-201ENST00000618027 521 ntBASIC1.72□□□□□ -2.13
CDH6P55285 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CDH6P55285 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
CDH6P55285 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CDH6P55285 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH6P55285 RNU6-1179P-201ENST00000384667 107 ntBASIC1.71□□□□□ -2.14
CDH6P55285 MIR29B2-201ENST00000385055 81 ntBASIC1.71□□□□□ -2.14
CDH6P55285 MIR1283-2-201ENST00000408621 87 ntBASIC1.71□□□□□ -2.14
CDH6P55285 RN7SKP284-201ENST00000411002 343 ntBASIC1.71□□□□□ -2.14
CDH6P55285 VN1R36P-201ENST00000414936 291 ntBASIC1.71□□□□□ -2.14
CDH6P55285 AC074117.2-201ENST00000417130 397 ntBASIC1.71□□□□□ -2.14
CDH6P55285 AL589872.1-201ENST00000426602 288 ntBASIC1.71□□□□□ -2.14
CDH6P55285 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.71□□□□□ -2.14
CDH6P55285 EPS15P1-201ENST00000448836 336 ntBASIC1.71□□□□□ -2.14
CDH6P55285 PRELID3BP1-201ENST00000457142 540 ntBASIC1.71□□□□□ -2.14
CDH6P55285 SNORA25.15-201ENST00000516487 89 ntBASIC1.71□□□□□ -2.14
CDH6P55285 Y_RNA.687-201ENST00000516558 91 ntBASIC1.71□□□□□ -2.14
CDH6P55285 DUXAP5-201ENST00000529668 529 ntBASIC1.71□□□□□ -2.14
CDH6P55285 AC022616.8-201ENST00000533569 253 ntBASIC1.71□□□□□ -2.14
CDH6P55285 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.71□□□□□ -2.14
CDH6P55285 HMGN1P30-201ENST00000589286 268 ntBASIC1.71□□□□□ -2.14
CDH6P55285 BNIP3P25-201ENST00000596023 559 ntBASIC1.71□□□□□ -2.14
CDH6P55285 Z82243.1-201ENST00000609432 473 ntBASIC1.71□□□□□ -2.14
CDH6P55285 AL132822.1-201ENST00000617063 513 ntBASIC1.71□□□□□ -2.14
CDH6P55285 AC007792.1-201ENST00000623023 402 ntBASIC1.71□□□□□ -2.14
CDH6P55285 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH6P55285 RNU6-212P-201ENST00000362642 104 ntBASIC1.7□□□□□ -2.14
CDH6P55285 Y_RNA.40-201ENST00000362645 93 ntBASIC1.7□□□□□ -2.14
CDH6P55285 RNU4-42P-201ENST00000364738 142 ntBASIC1.7□□□□□ -2.14
CDH6P55285 RNU6-641P-201ENST00000384006 107 ntBASIC1.7□□□□□ -2.14
CDH6P55285 AL627390.1-201ENST00000396055 340 ntBASIC1.7□□□□□ -2.14
CDH6P55285 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CDH6P55285 MED13P1-201ENST00000428342 171 ntBASIC1.7□□□□□ -2.14
CDH6P55285 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.7□□□□□ -2.14
CDH6P55285 RPS24P1-201ENST00000438550 371 ntBASIC1.7□□□□□ -2.14
CDH6P55285 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.7□□□□□ -2.14
CDH6P55285 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.7□□□□□ -2.14
CDH6P55285 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.7□□□□□ -2.14
CDH6P55285 SNORA3.4-201ENST00000515969 96 ntBASIC1.7□□□□□ -2.14
CDH6P55285 SNORA43.2-201ENST00000516652 128 ntBASIC1.7□□□□□ -2.14
CDH6P55285 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.7□□□□□ -2.14
CDH6P55285 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.7□□□□□ -2.14
CDH6P55285 AC018630.3-201ENST00000542637 96 ntBASIC1.7□□□□□ -2.14
CDH6P55285 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.7□□□□□ -2.14
CDH6P55285 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.7□□□□□ -2.14
CDH6P55285 AC002400.1-201ENST00000569310 726 ntBASIC1.7□□□□□ -2.14
CDH6P55285 MIR3683-201ENST00000580847 82 ntBASIC1.7□□□□□ -2.14
CDH6P55285 AC234772.3-201ENST00000602277 528 ntBASIC1.7□□□□□ -2.14
CDH6P55285 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.7□□□□□ -2.14
CDH6P55285 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.7□□□□□ -2.14
CDH6P55285 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.7□□□□□ -2.14
CDH6P55285 MTND4P23-201ENST00000447723 1363 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms