Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 SDAD1P2-201ENST00000441308 2028 ntBASIC3.91□□□□□ -1.78
MRE11P49959 AC087588.1-201ENST00000462203 316 ntBASIC3.91□□□□□ -1.78
MRE11P49959 S100A11P2-201ENST00000467589 312 ntBASIC3.91□□□□□ -1.78
MRE11P49959 HMGB1P30-201ENST00000492455 606 ntBASIC3.91□□□□□ -1.78
MRE11P49959 YWHAEP4-201ENST00000505390 198 ntBASIC3.91□□□□□ -1.78
MRE11P49959 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.91□□□□□ -1.78
MRE11P49959 SNORA31.20-201ENST00000517111 133 ntBASIC3.91□□□□□ -1.78
MRE11P49959 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
MRE11P49959 GNAI2P1-201ENST00000541815 315 ntBASIC3.91□□□□□ -1.78
MRE11P49959 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.91□□□□□ -1.78
MRE11P49959 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MRE11P49959 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.91□□□□□ -1.78
MRE11P49959 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.91□□□□□ -1.78
MRE11P49959 AC113195.1-201ENST00000579952 141 ntBASIC3.91□□□□□ -1.78
MRE11P49959 MIR3668-201ENST00000582138 75 ntBASIC3.91□□□□□ -1.78
MRE11P49959 MIR4276-201ENST00000584832 70 ntBASIC3.91□□□□□ -1.78
MRE11P49959 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.91□□□□□ -1.78
MRE11P49959 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.91□□□□□ -1.78
MRE11P49959 AP003355.3-201ENST00000623465 114 ntBASIC3.91□□□□□ -1.78
MRE11P49959 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.91□□□□□ -1.78
MRE11P49959 AC005592.1-201ENST00000566527 1640 ntBASIC3.91□□□□□ -1.78
MRE11P49959 AC010733.2-201ENST00000589496 5702 ntBASIC3.91□□□□□ -1.78
MRE11P49959 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
MRE11P49959 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
MRE11P49959 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.9□□□□□ -1.78
MRE11P49959 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
MRE11P49959 AL356274.2-201ENST00000624379 3752 ntBASIC3.9□□□□□ -1.78
MRE11P49959 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
MRE11P49959 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.9□□□□□ -1.79
MRE11P49959 RNU5A-1-201ENST00000362698 116 ntBASIC3.9□□□□□ -1.79
MRE11P49959 Y_RNA.176-201ENST00000363815 109 ntBASIC3.9□□□□□ -1.79
MRE11P49959 RNU6-629P-201ENST00000384061 103 ntBASIC3.9□□□□□ -1.79
MRE11P49959 SNORA48.8-201ENST00000391324 134 ntBASIC3.9□□□□□ -1.79
MRE11P49959 RNU2-3P-201ENST00000410144 191 ntBASIC3.9□□□□□ -1.79
MRE11P49959 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
MRE11P49959 RPL32P35-201ENST00000415214 394 ntBASIC3.9□□□□□ -1.79
MRE11P49959 AL353621.1-201ENST00000418219 243 ntBASIC3.9□□□□□ -1.79
MRE11P49959 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.9□□□□□ -1.79
MRE11P49959 AL592045.1-201ENST00000429867 352 ntBASIC3.9□□□□□ -1.79
MRE11P49959 RPL23AP50-201ENST00000434149 455 ntBASIC3.9□□□□□ -1.79
MRE11P49959 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.9□□□□□ -1.79
MRE11P49959 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.9□□□□□ -1.79
MRE11P49959 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.9□□□□□ -1.79
MRE11P49959 snoU13.4-201ENST00000458916 104 ntBASIC3.9□□□□□ -1.79
MRE11P49959 RPS15AP34-201ENST00000487776 387 ntBASIC3.9□□□□□ -1.79
MRE11P49959 AC097462.2-201ENST00000504623 481 ntBASIC3.9□□□□□ -1.79
MRE11P49959 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.9□□□□□ -1.79
MRE11P49959 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.9□□□□□ -1.79
MRE11P49959 SCARNA14-201ENST00000516903 136 ntBASIC3.9□□□□□ -1.79
MRE11P49959 RNA5SP471-201ENST00000516971 106 ntBASIC3.9□□□□□ -1.79
MRE11P49959 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.9□□□□□ -1.79
MRE11P49959 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
MRE11P49959 AC092447.9-201ENST00000603395 144 ntBASIC3.9□□□□□ -1.79
MRE11P49959 AC090425.1-201ENST00000610007 140 ntBASIC3.9□□□□□ -1.79
MRE11P49959 MIR7106-201ENST00000612419 65 ntBASIC3.9□□□□□ -1.79
MRE11P49959 AL162274.2-201ENST00000614406 332 ntBASIC3.9□□□□□ -1.79
MRE11P49959 MIR7111-201ENST00000619751 72 ntBASIC3.9□□□□□ -1.79
MRE11P49959 AL512643.1-201ENST00000635735 524 ntBASIC3.9□□□□□ -1.79
MRE11P49959 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
MRE11P49959 Z99571.1-201ENST00000636677 394 ntBASIC3.9□□□□□ -1.79
MRE11P49959 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.9□□□□□ -1.79
MRE11P49959 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MRE11P49959 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
MRE11P49959 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MRE11P49959 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
MRE11P49959 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MRE11P49959 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.9□□□□□ -1.79
MRE11P49959 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.9□□□□□ -1.79
MRE11P49959 AF117829.1-206ENST00000621883 3802 ntBASIC3.9□□□□□ -1.79
MRE11P49959 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.9□□□□□ -1.79
MRE11P49959 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
MRE11P49959 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
MRE11P49959 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
MRE11P49959 AC007256.1-201ENST00000392253 2765 ntBASIC3.89□□□□□ -1.79
MRE11P49959 SET-203ENST00000372688 801 ntTSL 2 BASIC3.89□□□□□ -1.79
MRE11P49959 DEFB109C-201ENST00000382575 264 ntBASIC3.89□□□□□ -1.79
MRE11P49959 DEFB109B-201ENST00000382656 264 ntBASIC3.89□□□□□ -1.79
MRE11P49959 RNU6-26P-201ENST00000383985 107 ntBASIC3.89□□□□□ -1.79
MRE11P49959 UBE2D3P2-201ENST00000424409 445 ntBASIC3.89□□□□□ -1.79
MRE11P49959 AC011816.1-201ENST00000441346 546 ntBASIC3.89□□□□□ -1.79
MRE11P49959 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.89□□□□□ -1.79
MRE11P49959 AC108860.1-201ENST00000484521 383 ntBASIC3.89□□□□□ -1.79
MRE11P49959 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.89□□□□□ -1.79
MRE11P49959 AC008716.1-201ENST00000511084 513 ntBASIC3.89□□□□□ -1.79
MRE11P49959 RNU6-264P-201ENST00000517134 104 ntBASIC3.89□□□□□ -1.79
MRE11P49959 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.89□□□□□ -1.79
MRE11P49959 IGHV3-76-201ENST00000522465 295 ntBASIC3.89□□□□□ -1.79
MRE11P49959 AP002404.1-201ENST00000532005 451 ntBASIC3.89□□□□□ -1.79
MRE11P49959 AL161670.1-201ENST00000554348 137 ntBASIC3.89□□□□□ -1.79
MRE11P49959 AC109446.1-201ENST00000566172 220 ntBASIC3.89□□□□□ -1.79
MRE11P49959 FAM60BP-201ENST00000578364 658 ntBASIC3.89□□□□□ -1.79
MRE11P49959 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.89□□□□□ -1.79
MRE11P49959 MIR5187-201ENST00000583479 76 ntBASIC3.89□□□□□ -1.79
MRE11P49959 OR1M4P-201ENST00000589199 287 ntBASIC3.89□□□□□ -1.79
MRE11P49959 AC124312.5-201ENST00000604451 268 ntBASIC3.89□□□□□ -1.79
MRE11P49959 PRR13P7-201ENST00000605538 430 ntBASIC3.89□□□□□ -1.79
MRE11P49959 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.89□□□□□ -1.79
MRE11P49959 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MRE11P49959 MAPK10-362ENST00000641864 4484 ntBASIC3.88□□□□□ -1.79
MRE11P49959 RNU6-512P-201ENST00000364438 103 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms