Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 RN7SL442P-201ENST00000473804 320 ntBASIC3.38□□□□□ -1.87
CLK3P49761 TRBVB-201ENST00000477100 408 ntBASIC3.38□□□□□ -1.87
CLK3P49761 AC113155.1-201ENST00000511141 769 ntBASIC3.38□□□□□ -1.87
CLK3P49761 AC026402.1-201ENST00000513642 170 ntBASIC3.38□□□□□ -1.87
CLK3P49761 RNU6-111P-201ENST00000517179 105 ntBASIC3.38□□□□□ -1.87
CLK3P49761 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.38□□□□□ -1.87
CLK3P49761 AP006245.1-201ENST00000522549 120 ntBASIC3.38□□□□□ -1.87
CLK3P49761 ATP5F1P5-201ENST00000526403 760 ntBASIC3.38□□□□□ -1.87
CLK3P49761 AP003733.2-201ENST00000529409 171 ntBASIC3.38□□□□□ -1.87
CLK3P49761 CPDP1-201ENST00000579660 283 ntBASIC3.38□□□□□ -1.87
CLK3P49761 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.38□□□□□ -1.87
CLK3P49761 RPS29P30-201ENST00000600975 111 ntBASIC3.38□□□□□ -1.87
CLK3P49761 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.38□□□□□ -1.87
CLK3P49761 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CLK3P49761 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLK3P49761 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLK3P49761 AL513302.2-201ENST00000562313 1842 ntBASIC3.37□□□□□ -1.87
CLK3P49761 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLK3P49761 AL359837.1-201ENST00000381357 287 ntBASIC3.37□□□□□ -1.87
CLK3P49761 RNU6-741P-201ENST00000383889 107 ntBASIC3.37□□□□□ -1.87
CLK3P49761 RNU6-611P-201ENST00000384276 104 ntBASIC3.37□□□□□ -1.87
CLK3P49761 RNU6-933P-201ENST00000384424 107 ntBASIC3.37□□□□□ -1.87
CLK3P49761 AL591034.2-201ENST00000402839 359 ntBASIC3.37□□□□□ -1.87
CLK3P49761 RNU6-325P-201ENST00000411132 105 ntBASIC3.37□□□□□ -1.87
CLK3P49761 RN7SKP53-201ENST00000411337 315 ntBASIC3.37□□□□□ -1.87
CLK3P49761 AC063979.1-201ENST00000415539 377 ntBASIC3.37□□□□□ -1.87
CLK3P49761 Z85995.1-201ENST00000415547 335 ntBASIC3.37□□□□□ -1.87
CLK3P49761 AL353621.1-201ENST00000418219 243 ntBASIC3.37□□□□□ -1.87
CLK3P49761 TMEM167AP1-201ENST00000423409 219 ntBASIC3.37□□□□□ -1.87
CLK3P49761 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.37□□□□□ -1.87
CLK3P49761 RNU7-169P-201ENST00000459456 61 ntBASIC3.37□□□□□ -1.87
CLK3P49761 AC087588.1-201ENST00000462203 316 ntBASIC3.37□□□□□ -1.87
CLK3P49761 AC010401.1-201ENST00000463867 348 ntBASIC3.37□□□□□ -1.87
CLK3P49761 AC084357.1-201ENST00000473404 255 ntBASIC3.37□□□□□ -1.87
CLK3P49761 RPL30P5-201ENST00000494923 336 ntBASIC3.37□□□□□ -1.87
CLK3P49761 HMGB1P35-201ENST00000503360 598 ntBASIC3.37□□□□□ -1.87
CLK3P49761 AC008716.1-201ENST00000511084 513 ntBASIC3.37□□□□□ -1.87
CLK3P49761 RNA5SP291-201ENST00000517222 105 ntBASIC3.37□□□□□ -1.87
CLK3P49761 AC109329.1-201ENST00000518744 317 ntBASIC3.37□□□□□ -1.87
CLK3P49761 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.37□□□□□ -1.87
CLK3P49761 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
CLK3P49761 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.37□□□□□ -1.87
CLK3P49761 AC004584.2-201ENST00000570407 410 ntBASIC3.37□□□□□ -1.87
CLK3P49761 AC012433.1-201ENST00000588916 398 ntBASIC3.37□□□□□ -1.87
CLK3P49761 AC034102.8-201ENST00000615146 484 ntBASIC3.37□□□□□ -1.87
CLK3P49761 AC034229.5-201ENST00000624258 185 ntBASIC3.37□□□□□ -1.87
CLK3P49761 U2.22-201ENST00000636441 106 ntBASIC3.37□□□□□ -1.87
CLK3P49761 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CLK3P49761 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.36□□□□□ -1.87
CLK3P49761 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLK3P49761 RNU6-212P-201ENST00000362642 104 ntBASIC3.36□□□□□ -1.87
CLK3P49761 Y_RNA.324-201ENST00000365165 102 ntBASIC3.36□□□□□ -1.87
CLK3P49761 Y_RNA.416-201ENST00000384014 113 ntBASIC3.36□□□□□ -1.87
CLK3P49761 AL513475.1-201ENST00000406602 315 ntBASIC3.36□□□□□ -1.87
CLK3P49761 MIR548H3-201ENST00000408771 118 ntBASIC3.36□□□□□ -1.87
CLK3P49761 PIGPP3-201ENST00000425307 415 ntBASIC3.36□□□□□ -1.87
CLK3P49761 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLK3P49761 AC007919.1-201ENST00000429380 217 ntBASIC3.36□□□□□ -1.87
CLK3P49761 BX679664.1-201ENST00000434429 253 ntBASIC3.36□□□□□ -1.87
CLK3P49761 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.36□□□□□ -1.87
CLK3P49761 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLK3P49761 LINC01399-202ENST00000458450 244 ntBASIC3.36□□□□□ -1.87
CLK3P49761 SNORD105B-201ENST00000458770 79 ntBASIC3.36□□□□□ -1.87
CLK3P49761 RPS15AP34-201ENST00000487776 387 ntBASIC3.36□□□□□ -1.87
CLK3P49761 AC108043.1-201ENST00000512696 574 ntBASIC3.36□□□□□ -1.87
CLK3P49761 RN7SKP18-201ENST00000516005 275 ntBASIC3.36□□□□□ -1.87
CLK3P49761 RNU6-397P-201ENST00000516226 104 ntBASIC3.36□□□□□ -1.87
CLK3P49761 RNU6-570P-201ENST00000517051 105 ntBASIC3.36□□□□□ -1.87
CLK3P49761 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.36□□□□□ -1.87
CLK3P49761 AC034114.1-201ENST00000520293 285 ntBASIC3.36□□□□□ -1.87
CLK3P49761 AC022080.3-201ENST00000544433 482 ntBASIC3.36□□□□□ -1.87
CLK3P49761 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.36□□□□□ -1.87
CLK3P49761 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.36□□□□□ -1.87
CLK3P49761 TRAV32-201ENST00000553993 340 ntBASIC3.36□□□□□ -1.87
CLK3P49761 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.36□□□□□ -1.87
CLK3P49761 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.36□□□□□ -1.87
CLK3P49761 SNORD39.4-201ENST00000620099 78 ntBASIC3.36□□□□□ -1.87
CLK3P49761 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.36□□□□□ -1.87
CLK3P49761 AC007656.2-201ENST00000624902 4547 ntBASIC3.36□□□□□ -1.87
CLK3P49761 CUL1P1-201ENST00000509510 2425 ntBASIC3.35□□□□□ -1.87
CLK3P49761 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.35□□□□□ -1.87
CLK3P49761 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLK3P49761 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLK3P49761 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.35□□□□□ -1.87
CLK3P49761 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CLK3P49761 RNA5SP295-201ENST00000362655 121 ntBASIC3.35□□□□□ -1.87
CLK3P49761 Y_RNA.183-201ENST00000363882 113 ntBASIC3.35□□□□□ -1.87
CLK3P49761 U8.8-201ENST00000365399 135 ntBASIC3.35□□□□□ -1.87
CLK3P49761 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.35□□□□□ -1.87
CLK3P49761 Y_RNA.471-201ENST00000384312 102 ntBASIC3.35□□□□□ -1.87
CLK3P49761 MIR591-201ENST00000385290 95 ntBASIC3.35□□□□□ -1.87
CLK3P49761 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.35□□□□□ -1.87
CLK3P49761 AC007098.1-201ENST00000420122 367 ntBASIC3.35□□□□□ -1.87
CLK3P49761 AL035423.1-201ENST00000420331 213 ntBASIC3.35□□□□□ -1.87
CLK3P49761 AC006946.1-201ENST00000429106 328 ntBASIC3.35□□□□□ -1.87
CLK3P49761 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.35□□□□□ -1.87
CLK3P49761 AC092573.2-201ENST00000434546 243 ntBASIC3.35□□□□□ -1.87
CLK3P49761 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.35□□□□□ -1.87
CLK3P49761 AL392103.1-201ENST00000447000 198 ntBASIC3.35□□□□□ -1.87
CLK3P49761 RNA5SP310-201ENST00000459084 116 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms