Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.93□□□□□ -1.94
SOX2P48431 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SOX2P48431 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.92□□□□□ -1.94
SOX2P48431 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.92□□□□□ -1.94
SOX2P48431 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.92□□□□□ -1.94
SOX2P48431 AC110774.1-201ENST00000623567 2018 ntBASIC2.92□□□□□ -1.94
SOX2P48431 RNU6-227P-201ENST00000362865 103 ntBASIC2.92□□□□□ -1.94
SOX2P48431 Y_RNA.252-201ENST00000364556 101 ntBASIC2.92□□□□□ -1.94
SOX2P48431 SNORA33.2-201ENST00000365413 134 ntBASIC2.92□□□□□ -1.94
SOX2P48431 FTH1P15-201ENST00000406984 280 ntBASIC2.92□□□□□ -1.94
SOX2P48431 RNA5SP293-201ENST00000410527 113 ntBASIC2.92□□□□□ -1.94
SOX2P48431 RNU6-1245P-201ENST00000411130 106 ntBASIC2.92□□□□□ -1.94
SOX2P48431 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.92□□□□□ -1.94
SOX2P48431 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.92□□□□□ -1.94
SOX2P48431 EIF4EP2-201ENST00000422816 654 ntBASIC2.92□□□□□ -1.94
SOX2P48431 AC018865.2-201ENST00000423631 129 ntBASIC2.92□□□□□ -1.94
SOX2P48431 GOT2P5-201ENST00000433995 546 ntBASIC2.92□□□□□ -1.94
SOX2P48431 CST9LP2-201ENST00000437612 320 ntBASIC2.92□□□□□ -1.94
SOX2P48431 MTND4P19-201ENST00000446659 478 ntBASIC2.92□□□□□ -1.94
SOX2P48431 AC115115.1-201ENST00000449927 248 ntBASIC2.92□□□□□ -1.94
SOX2P48431 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SOX2P48431 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.92□□□□□ -1.94
SOX2P48431 AC034236.1-201ENST00000469891 373 ntBASIC2.92□□□□□ -1.94
SOX2P48431 FO393415.2-201ENST00000480085 343 ntBASIC2.92□□□□□ -1.94
SOX2P48431 MRPL42P6-201ENST00000486397 371 ntBASIC2.92□□□□□ -1.94
SOX2P48431 AC006483.1-201ENST00000487308 313 ntBASIC2.92□□□□□ -1.94
SOX2P48431 RN7SKP295-201ENST00000517264 153 ntBASIC2.92□□□□□ -1.94
SOX2P48431 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.92□□□□□ -1.94
SOX2P48431 CR383656.8-201ENST00000549046 145 ntBASIC2.92□□□□□ -1.94
SOX2P48431 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.92□□□□□ -1.94
SOX2P48431 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
SOX2P48431 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.92□□□□□ -1.94
SOX2P48431 AC093010.3-201ENST00000570269 15214 ntBASIC2.92□□□□□ -1.94
SOX2P48431 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.92□□□□□ -1.94
SOX2P48431 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SOX2P48431 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SOX2P48431 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.91□□□□□ -1.94
SOX2P48431 AC010680.1-201ENST00000590024 3590 ntBASIC2.91□□□□□ -1.94
SOX2P48431 MIR606-201ENST00000384851 96 ntBASIC2.91□□□□□ -1.94
SOX2P48431 RNA5SP252-201ENST00000391131 119 ntBASIC2.91□□□□□ -1.94
SOX2P48431 AC243428.1-201ENST00000421099 264 ntBASIC2.91□□□□□ -1.94
SOX2P48431 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.91□□□□□ -1.94
SOX2P48431 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.91□□□□□ -1.94
SOX2P48431 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.91□□□□□ -1.94
SOX2P48431 RPS15AP5-201ENST00000436276 388 ntBASIC2.91□□□□□ -1.94
SOX2P48431 RPL21P23-201ENST00000446654 460 ntBASIC2.91□□□□□ -1.94
SOX2P48431 AC012308.1-201ENST00000451232 178 ntBASIC2.91□□□□□ -1.94
SOX2P48431 AC025518.1-201ENST00000479856 347 ntBASIC2.91□□□□□ -1.94
SOX2P48431 AC022447.4-201ENST00000504053 364 ntBASIC2.91□□□□□ -1.94
SOX2P48431 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.91□□□□□ -1.94
SOX2P48431 RN7SKP18-201ENST00000516005 275 ntBASIC2.91□□□□□ -1.94
SOX2P48431 RNU1-143P-201ENST00000516296 146 ntBASIC2.91□□□□□ -1.94
SOX2P48431 RNU6-699P-201ENST00000517081 110 ntBASIC2.91□□□□□ -1.94
SOX2P48431 AC068657.1-201ENST00000520807 306 ntBASIC2.91□□□□□ -1.94
SOX2P48431 CBX3P8-201ENST00000532412 525 ntBASIC2.91□□□□□ -1.94
SOX2P48431 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.91□□□□□ -1.94
SOX2P48431 U1.23-201ENST00000610293 146 ntBASIC2.91□□□□□ -1.94
SOX2P48431 RNU1-68P-201ENST00000615382 146 ntBASIC2.91□□□□□ -1.94
SOX2P48431 U1.39-201ENST00000621562 146 ntBASIC2.91□□□□□ -1.94
SOX2P48431 AC097372.5-201ENST00000623665 376 ntBASIC2.91□□□□□ -1.94
SOX2P48431 AC068724.3-201ENST00000625906 87 ntBASIC2.91□□□□□ -1.94
SOX2P48431 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.91□□□□□ -1.94
SOX2P48431 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SOX2P48431 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.91□□□□□ -1.94
SOX2P48431 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.94
SOX2P48431 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SOX2P48431 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SOX2P48431 MIR148B-201ENST00000362252 99 ntBASIC2.9□□□□□ -1.95
SOX2P48431 Y_RNA.48-201ENST00000362710 103 ntBASIC2.9□□□□□ -1.95
SOX2P48431 U3.6-201ENST00000363622 211 ntBASIC2.9□□□□□ -1.95
SOX2P48431 Y_RNA.428-201ENST00000384078 102 ntBASIC2.9□□□□□ -1.95
SOX2P48431 BTF3L4P2-201ENST00000392798 346 ntBASIC2.9□□□□□ -1.95
SOX2P48431 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SOX2P48431 AP000275.1-201ENST00000411943 390 ntBASIC2.9□□□□□ -1.95
SOX2P48431 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.9□□□□□ -1.95
SOX2P48431 AC091390.1-201ENST00000433904 331 ntBASIC2.9□□□□□ -1.95
SOX2P48431 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.9□□□□□ -1.95
SOX2P48431 RPL23AP22-201ENST00000437556 453 ntBASIC2.9□□□□□ -1.95
SOX2P48431 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SOX2P48431 SNORD105B-201ENST00000458770 79 ntBASIC2.9□□□□□ -1.95
SOX2P48431 RPS29P27-201ENST00000463711 170 ntBASIC2.9□□□□□ -1.95
SOX2P48431 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.9□□□□□ -1.95
SOX2P48431 RPL17P19-201ENST00000489069 552 ntBASIC2.9□□□□□ -1.95
SOX2P48431 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.9□□□□□ -1.95
SOX2P48431 RNA5SP217-201ENST00000515959 91 ntBASIC2.9□□□□□ -1.95
SOX2P48431 RNU6-120P-201ENST00000516077 103 ntBASIC2.9□□□□□ -1.95
SOX2P48431 SNORD59.2-201ENST00000516873 68 ntBASIC2.9□□□□□ -1.95
SOX2P48431 SNORD116.3-201ENST00000517176 78 ntBASIC2.9□□□□□ -1.95
SOX2P48431 SCARNA20.6-201ENST00000517251 106 ntBASIC2.9□□□□□ -1.95
SOX2P48431 AC023442.1-201ENST00000531247 422 ntBASIC2.9□□□□□ -1.95
SOX2P48431 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.9□□□□□ -1.95
SOX2P48431 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.9□□□□□ -1.95
SOX2P48431 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.9□□□□□ -1.95
SOX2P48431 AL360085.1-201ENST00000604713 532 ntBASIC2.9□□□□□ -1.95
SOX2P48431 MIR7851-201ENST00000610611 160 ntBASIC2.9□□□□□ -1.95
SOX2P48431 uc_338.1-201ENST00000612113 180 ntBASIC2.9□□□□□ -1.95
SOX2P48431 AC083806.3-201ENST00000614016 455 ntBASIC2.9□□□□□ -1.95
SOX2P48431 HMGB1P24-202ENST00000615653 685 ntBASIC2.9□□□□□ -1.95
SOX2P48431 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.9□□□□□ -1.95
SOX2P48431 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms