Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 AL133217.1-201ENST00000450980 425 ntBASIC1.78□□□□□ -2.12
RFX3P48380 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.78□□□□□ -2.12
RFX3P48380 snoU109.1-201ENST00000459339 135 ntBASIC1.78□□□□□ -2.12
RFX3P48380 HMGB1P30-201ENST00000492455 606 ntBASIC1.78□□□□□ -2.12
RFX3P48380 Vault.3-201ENST00000516676 95 ntBASIC1.78□□□□□ -2.12
RFX3P48380 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.78□□□□□ -2.12
RFX3P48380 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.78□□□□□ -2.12
RFX3P48380 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.78□□□□□ -2.12
RFX3P48380 NDUFA5P6-201ENST00000542110 379 ntBASIC1.78□□□□□ -2.12
RFX3P48380 MIR4299-201ENST00000577899 72 ntBASIC1.78□□□□□ -2.12
RFX3P48380 AC005771.1-201ENST00000585581 349 ntBASIC1.78□□□□□ -2.12
RFX3P48380 AL109918.3-201ENST00000603072 338 ntBASIC1.78□□□□□ -2.12
RFX3P48380 AC073410.2-201ENST00000603240 332 ntBASIC1.78□□□□□ -2.12
RFX3P48380 AC098614.4-201ENST00000607601 462 ntBASIC1.78□□□□□ -2.12
RFX3P48380 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.78□□□□□ -2.12
RFX3P48380 U2.15-201ENST00000611544 191 ntBASIC1.78□□□□□ -2.12
RFX3P48380 U2.16-201ENST00000613119 191 ntBASIC1.78□□□□□ -2.12
RFX3P48380 U2.12-201ENST00000613778 191 ntBASIC1.78□□□□□ -2.12
RFX3P48380 U2.20-201ENST00000613956 192 ntBASIC1.78□□□□□ -2.12
RFX3P48380 U2.9-201ENST00000615427 191 ntBASIC1.78□□□□□ -2.12
RFX3P48380 U2.11-201ENST00000616345 191 ntBASIC1.78□□□□□ -2.12
RFX3P48380 U2.2-201ENST00000616535 191 ntBASIC1.78□□□□□ -2.12
RFX3P48380 U2.3-201ENST00000617785 191 ntBASIC1.78□□□□□ -2.12
RFX3P48380 U2.19-201ENST00000618602 191 ntBASIC1.78□□□□□ -2.12
RFX3P48380 RNU2-1-201ENST00000618664 191 ntBASIC1.78□□□□□ -2.12
RFX3P48380 U2.6-201ENST00000619225 191 ntBASIC1.78□□□□□ -2.12
RFX3P48380 U2.5-201ENST00000619465 191 ntBASIC1.78□□□□□ -2.12
RFX3P48380 U2.10-201ENST00000620268 191 ntBASIC1.78□□□□□ -2.12
RFX3P48380 AL157786.1-207ENST00000627771 695 ntBASIC1.78□□□□□ -2.12
RFX3P48380 AC008993.2-201ENST00000631744 806 ntBASIC1.78□□□□□ -2.12
RFX3P48380 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
RFX3P48380 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
RFX3P48380 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
RFX3P48380 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RFX3P48380 RNU6-179P-201ENST00000363350 107 ntBASIC1.77□□□□□ -2.13
RFX3P48380 RNU6-529P-201ENST00000363383 104 ntBASIC1.77□□□□□ -2.13
RFX3P48380 SNORD14B-201ENST00000364533 90 ntBASIC1.77□□□□□ -2.13
RFX3P48380 RNU6-61P-201ENST00000365528 109 ntBASIC1.77□□□□□ -2.13
RFX3P48380 MIR186-201ENST00000384988 86 ntBASIC1.77□□□□□ -2.13
RFX3P48380 MIR10A-201ENST00000385043 110 ntBASIC1.77□□□□□ -2.13
RFX3P48380 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
RFX3P48380 AL079342.1-201ENST00000401460 267 ntBASIC1.77□□□□□ -2.13
RFX3P48380 AC019129.1-201ENST00000403786 261 ntBASIC1.77□□□□□ -2.13
RFX3P48380 HMGN2P3-201ENST00000433603 273 ntBASIC1.77□□□□□ -2.13
RFX3P48380 HMGN2P5-201ENST00000436882 273 ntBASIC1.77□□□□□ -2.13
RFX3P48380 AL451074.3-201ENST00000437709 472 ntBASIC1.77□□□□□ -2.13
RFX3P48380 AC073614.1-201ENST00000438690 650 ntBASIC1.77□□□□□ -2.13
RFX3P48380 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.77□□□□□ -2.13
RFX3P48380 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.77□□□□□ -2.13
RFX3P48380 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.77□□□□□ -2.13
RFX3P48380 MRPS17P9-201ENST00000511924 393 ntBASIC1.77□□□□□ -2.13
RFX3P48380 RNU2-53P-201ENST00000516257 147 ntBASIC1.77□□□□□ -2.13
RFX3P48380 RNU6-759P-201ENST00000516740 103 ntBASIC1.77□□□□□ -2.13
RFX3P48380 RNU6-586P-201ENST00000517265 104 ntBASIC1.77□□□□□ -2.13
RFX3P48380 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.77□□□□□ -2.13
RFX3P48380 CYCSP27-201ENST00000527643 293 ntBASIC1.77□□□□□ -2.13
RFX3P48380 AP003072.2-201ENST00000527756 676 ntBASIC1.77□□□□□ -2.13
RFX3P48380 IMMP1LP2-201ENST00000552954 492 ntBASIC1.77□□□□□ -2.13
RFX3P48380 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.77□□□□□ -2.13
RFX3P48380 MIR5692A1-201ENST00000580523 69 ntBASIC1.77□□□□□ -2.13
RFX3P48380 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.77□□□□□ -2.13
RFX3P48380 BNIP3P30-201ENST00000601184 574 ntBASIC1.77□□□□□ -2.13
RFX3P48380 CLIC4P2-201ENST00000601934 717 ntBASIC1.77□□□□□ -2.13
RFX3P48380 AC021646.1-201ENST00000605469 484 ntBASIC1.77□□□□□ -2.13
RFX3P48380 AL133173.2-201ENST00000614270 90 ntBASIC1.77□□□□□ -2.13
RFX3P48380 AL603839.4-201ENST00000624658 1005 ntBASIC1.77□□□□□ -2.13
RFX3P48380 AC019226.2-201ENST00000625973 424 ntBASIC1.77□□□□□ -2.13
RFX3P48380 MTND5P17-201ENST00000418405 1603 ntBASIC1.77□□□□□ -2.13
RFX3P48380 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
RFX3P48380 OR4G2P-201ENST00000328113 903 ntBASIC1.76□□□□□ -2.13
RFX3P48380 U8.3-201ENST00000363321 132 ntBASIC1.76□□□□□ -2.13
RFX3P48380 RNU6-169P-201ENST00000365336 107 ntBASIC1.76□□□□□ -2.13
RFX3P48380 RNU6-1179P-201ENST00000384667 107 ntBASIC1.76□□□□□ -2.13
RFX3P48380 RNU2-48P-201ENST00000410694 191 ntBASIC1.76□□□□□ -2.13
RFX3P48380 UBE2V1P10-201ENST00000414685 269 ntBASIC1.76□□□□□ -2.13
RFX3P48380 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
RFX3P48380 HMGN2P19-201ENST00000425149 265 ntBASIC1.76□□□□□ -2.13
RFX3P48380 AC104850.1-201ENST00000435940 476 ntBASIC1.76□□□□□ -2.13
RFX3P48380 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.76□□□□□ -2.13
RFX3P48380 AC003989.2-201ENST00000440224 169 ntBASIC1.76□□□□□ -2.13
RFX3P48380 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.76□□□□□ -2.13
RFX3P48380 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.76□□□□□ -2.13
RFX3P48380 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.76□□□□□ -2.13
RFX3P48380 RAP1BP2-201ENST00000478270 544 ntBASIC1.76□□□□□ -2.13
RFX3P48380 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.76□□□□□ -2.13
RFX3P48380 AC116562.3-201ENST00000506136 177 ntBASIC1.76□□□□□ -2.13
RFX3P48380 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RFX3P48380 RNU6-685P-201ENST00000517088 95 ntBASIC1.76□□□□□ -2.13
RFX3P48380 RNU6-667P-201ENST00000517186 102 ntBASIC1.76□□□□□ -2.13
RFX3P48380 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.76□□□□□ -2.13
RFX3P48380 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.76□□□□□ -2.13
RFX3P48380 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.76□□□□□ -2.13
RFX3P48380 AC068587.5-201ENST00000528506 175 ntBASIC1.76□□□□□ -2.13
RFX3P48380 AC087883.1-201ENST00000551882 391 ntBASIC1.76□□□□□ -2.13
RFX3P48380 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.76□□□□□ -2.13
RFX3P48380 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.76□□□□□ -2.13
RFX3P48380 AC008521.1-201ENST00000587471 187 ntBASIC1.76□□□□□ -2.13
RFX3P48380 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.76□□□□□ -2.13
RFX3P48380 uc_338.15-201ENST00000615470 191 ntBASIC1.76□□□□□ -2.13
RFX3P48380 AC009159.2-201ENST00000617603 606 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms