Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.31□□□□□ -1.88
TM4SF4P48230 MIR5692C1-201ENST00000585309 91 ntBASIC3.31□□□□□ -1.88
TM4SF4P48230 AL158827.2-201ENST00000602494 330 ntBASIC3.31□□□□□ -1.88
TM4SF4P48230 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.31□□□□□ -1.88
TM4SF4P48230 uc_338.14-201ENST00000613162 166 ntBASIC3.31□□□□□ -1.88
TM4SF4P48230 AL691447.3-201ENST00000635020 330 ntBASIC3.31□□□□□ -1.88
TM4SF4P48230 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TM4SF4P48230 HAUS6P2-201ENST00000433254 2404 ntBASIC3.31□□□□□ -1.88
TM4SF4P48230 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.31□□□□□ -1.88
TM4SF4P48230 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TM4SF4P48230 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
TM4SF4P48230 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
TM4SF4P48230 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
TM4SF4P48230 MIR30E-201ENST00000362104 92 ntBASIC3.3□□□□□ -1.88
TM4SF4P48230 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.3□□□□□ -1.88
TM4SF4P48230 RNU6-128P-201ENST00000383976 107 ntBASIC3.3□□□□□ -1.88
TM4SF4P48230 Y_RNA.414-201ENST00000384011 101 ntBASIC3.3□□□□□ -1.88
TM4SF4P48230 RNU6-510P-201ENST00000391239 108 ntBASIC3.3□□□□□ -1.88
TM4SF4P48230 AL138827.1-201ENST00000402666 306 ntBASIC3.3□□□□□ -1.88
TM4SF4P48230 SNORA3.2-201ENST00000408221 125 ntBASIC3.3□□□□□ -1.88
TM4SF4P48230 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.3□□□□□ -1.88
TM4SF4P48230 AL359672.1-201ENST00000442302 409 ntBASIC3.3□□□□□ -1.88
TM4SF4P48230 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.3□□□□□ -1.88
TM4SF4P48230 AC087884.1-201ENST00000469738 328 ntBASIC3.3□□□□□ -1.88
TM4SF4P48230 RPL23AP45-201ENST00000476406 468 ntBASIC3.3□□□□□ -1.88
TM4SF4P48230 RPL22P13-201ENST00000493291 347 ntBASIC3.3□□□□□ -1.88
TM4SF4P48230 AC008628.2-201ENST00000502605 298 ntBASIC3.3□□□□□ -1.88
TM4SF4P48230 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.3□□□□□ -1.88
TM4SF4P48230 RNA5SP148-201ENST00000516527 94 ntBASIC3.3□□□□□ -1.88
TM4SF4P48230 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.3□□□□□ -1.88
TM4SF4P48230 PSMA3P-201ENST00000555485 635 ntBASIC3.3□□□□□ -1.88
TM4SF4P48230 AC123912.5-201ENST00000605470 343 ntBASIC3.3□□□□□ -1.88
TM4SF4P48230 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.3□□□□□ -1.88
TM4SF4P48230 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
TM4SF4P48230 AC244517.12-201ENST00000623581 663 ntBASIC3.3□□□□□ -1.88
TM4SF4P48230 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TM4SF4P48230 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
TM4SF4P48230 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
TM4SF4P48230 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
TM4SF4P48230 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.29□□□□□ -1.88
TM4SF4P48230 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
TM4SF4P48230 RNA5SP21-201ENST00000410917 96 ntBASIC3.29□□□□□ -1.88
TM4SF4P48230 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.29□□□□□ -1.88
TM4SF4P48230 RBMX2P4-201ENST00000441256 376 ntBASIC3.29□□□□□ -1.88
TM4SF4P48230 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.29□□□□□ -1.88
TM4SF4P48230 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.29□□□□□ -1.88
TM4SF4P48230 AP000852.1-201ENST00000472460 573 ntBASIC3.29□□□□□ -1.88
TM4SF4P48230 ANXA2P1-201ENST00000505539 926 ntBASIC3.29□□□□□ -1.88
TM4SF4P48230 AK3P2-201ENST00000507976 429 ntBASIC3.29□□□□□ -1.88
TM4SF4P48230 FAM206BP-201ENST00000510179 541 ntBASIC3.29□□□□□ -1.88
TM4SF4P48230 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.29□□□□□ -1.88
TM4SF4P48230 CR383656.8-201ENST00000549046 145 ntBASIC3.29□□□□□ -1.88
TM4SF4P48230 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.29□□□□□ -1.88
TM4SF4P48230 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.29□□□□□ -1.88
TM4SF4P48230 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.29□□□□□ -1.88
TM4SF4P48230 AL591516.1-201ENST00000611326 274 ntBASIC3.29□□□□□ -1.88
TM4SF4P48230 AC092608.2-201ENST00000624427 218 ntBASIC3.29□□□□□ -1.88
TM4SF4P48230 AC099654.14-201ENST00000638599 341 ntBASIC3.29□□□□□ -1.88
TM4SF4P48230 AC009487.2-201ENST00000420969 6821 ntBASIC3.29□□□□□ -1.88
TM4SF4P48230 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.29□□□□□ -1.88
TM4SF4P48230 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TM4SF4P48230 FGF7P8-201ENST00000402994 292 ntBASIC3.28□□□□□ -1.88
TM4SF4P48230 SNORD56-201ENST00000413522 71 ntBASIC3.28□□□□□ -1.88
TM4SF4P48230 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.28□□□□□ -1.88
TM4SF4P48230 AC138623.1-201ENST00000418060 216 ntBASIC3.28□□□□□ -1.88
TM4SF4P48230 RPL30P16-201ENST00000419341 429 ntBASIC3.28□□□□□ -1.88
TM4SF4P48230 RPL23AP58-201ENST00000440453 469 ntBASIC3.28□□□□□ -1.88
TM4SF4P48230 MTND3P10-201ENST00000450967 341 ntBASIC3.28□□□□□ -1.88
TM4SF4P48230 snoU13.23-201ENST00000458863 104 ntBASIC3.28□□□□□ -1.88
TM4SF4P48230 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.28□□□□□ -1.88
TM4SF4P48230 RNU6-1332P-201ENST00000516666 104 ntBASIC3.28□□□□□ -1.88
TM4SF4P48230 RN7SKP256-201ENST00000517201 314 ntBASIC3.28□□□□□ -1.88
TM4SF4P48230 SCARNA11.3-201ENST00000517276 130 ntBASIC3.28□□□□□ -1.88
TM4SF4P48230 RNU6-91P-201ENST00000607774 107 ntBASIC3.28□□□□□ -1.88
TM4SF4P48230 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.28□□□□□ -1.88
TM4SF4P48230 RMST_7.1-201ENST00000621935 268 ntBASIC3.28□□□□□ -1.88
TM4SF4P48230 U4.7-201ENST00000638126 106 ntBASIC3.28□□□□□ -1.88
TM4SF4P48230 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.28□□□□□ -1.88
TM4SF4P48230 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.28□□□□□ -1.88
TM4SF4P48230 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.28□□□□□ -1.88
TM4SF4P48230 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TM4SF4P48230 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.27□□□□□ -1.89
TM4SF4P48230 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TM4SF4P48230 RNU6-942P-201ENST00000363002 107 ntBASIC3.27□□□□□ -1.89
TM4SF4P48230 RNU6-1252P-201ENST00000363054 104 ntBASIC3.27□□□□□ -1.89
TM4SF4P48230 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TM4SF4P48230 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.27□□□□□ -1.89
TM4SF4P48230 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.27□□□□□ -1.89
TM4SF4P48230 SNORA31.26-201ENST00000517250 137 ntBASIC3.27□□□□□ -1.89
TM4SF4P48230 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.27□□□□□ -1.89
TM4SF4P48230 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.27□□□□□ -1.89
TM4SF4P48230 AC087241.2-201ENST00000535801 324 ntBASIC3.27□□□□□ -1.89
TM4SF4P48230 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.27□□□□□ -1.89
TM4SF4P48230 AC105137.2-201ENST00000569073 466 ntBASIC3.27□□□□□ -1.89
TM4SF4P48230 AC005668.1-201ENST00000571142 476 ntBASIC3.27□□□□□ -1.89
TM4SF4P48230 MIR4765-201ENST00000585007 77 ntBASIC3.27□□□□□ -1.89
TM4SF4P48230 AC010620.2-201ENST00000600135 313 ntBASIC3.27□□□□□ -1.89
TM4SF4P48230 AC019159.1-201ENST00000605094 187 ntBASIC3.27□□□□□ -1.89
TM4SF4P48230 CTHRC1P1-201ENST00000605383 469 ntBASIC3.27□□□□□ -1.89
TM4SF4P48230 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms