Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC011712.1-201ENST00000588959 234 ntBASIC2.58□□□□□ -2
SLC6A12P48065 AC005261.5-201ENST00000596280 355 ntBASIC2.58□□□□□ -2
SLC6A12P48065 VN1R80P-201ENST00000597126 338 ntBASIC2.58□□□□□ -2
SLC6A12P48065 AL117336.2-201ENST00000602435 335 ntBASIC2.58□□□□□ -2
SLC6A12P48065 RPL23AP88-201ENST00000605759 454 ntBASIC2.58□□□□□ -2
SLC6A12P48065 Y_RNA.804-201ENST00000615262 101 ntBASIC2.58□□□□□ -2
SLC6A12P48065 MIR6852-201ENST00000621699 66 ntBASIC2.58□□□□□ -2
SLC6A12P48065 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SLC6A12P48065 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SLC6A12P48065 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.58□□□□□ -2
SLC6A12P48065 AC009487.2-201ENST00000420969 6821 ntBASIC2.58□□□□□ -2
SLC6A12P48065 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.58□□□□□ -2
SLC6A12P48065 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SLC6A12P48065 AL365361.1-201ENST00000566942 3481 ntBASIC2.57□□□□□ -2
SLC6A12P48065 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.57□□□□□ -2
SLC6A12P48065 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.57□□□□□ -2
SLC6A12P48065 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.57□□□□□ -2
SLC6A12P48065 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SLC6A12P48065 SNORD3E-201ENST00000362899 217 ntBASIC2.57□□□□□ -2
SLC6A12P48065 SNORA5B-201ENST00000363786 132 ntBASIC2.57□□□□□ -2
SLC6A12P48065 RNU6-45P-201ENST00000384471 107 ntBASIC2.57□□□□□ -2
SLC6A12P48065 RNU6-393P-201ENST00000384475 107 ntBASIC2.57□□□□□ -2
SLC6A12P48065 MIR592-201ENST00000384959 97 ntBASIC2.57□□□□□ -2
SLC6A12P48065 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.57□□□□□ -2
SLC6A12P48065 RPL21P2-201ENST00000440049 481 ntBASIC2.57□□□□□ -2
SLC6A12P48065 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.57□□□□□ -2
SLC6A12P48065 AC007547.1-201ENST00000462177 490 ntBASIC2.57□□□□□ -2
SLC6A12P48065 AC128713.1-201ENST00000471495 306 ntBASIC2.57□□□□□ -2
SLC6A12P48065 AC139453.3-201ENST00000493276 369 ntBASIC2.57□□□□□ -2
SLC6A12P48065 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.57□□□□□ -2
SLC6A12P48065 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.57□□□□□ -2
SLC6A12P48065 AC046134.1-201ENST00000514454 666 ntBASIC2.57□□□□□ -2
SLC6A12P48065 LRRC34P2-201ENST00000514850 553 ntBASIC2.57□□□□□ -2
SLC6A12P48065 RN7SKP132-201ENST00000516001 208 ntBASIC2.57□□□□□ -2
SLC6A12P48065 RNU4-49P-201ENST00000516080 140 ntBASIC2.57□□□□□ -2
SLC6A12P48065 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.57□□□□□ -2
SLC6A12P48065 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.57□□□□□ -2
SLC6A12P48065 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.57□□□□□ -2
SLC6A12P48065 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.57□□□□□ -2
SLC6A12P48065 RAB11AP2-201ENST00000545905 639 ntBASIC2.57□□□□□ -2
SLC6A12P48065 AL157871.3-201ENST00000557231 293 ntBASIC2.57□□□□□ -2
SLC6A12P48065 AC021739.1-201ENST00000559631 174 ntBASIC2.57□□□□□ -2
SLC6A12P48065 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.57□□□□□ -2
SLC6A12P48065 MIR4742-201ENST00000581069 85 ntBASIC2.57□□□□□ -2
SLC6A12P48065 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.57□□□□□ -2
SLC6A12P48065 AC092747.3-201ENST00000603769 301 ntBASIC2.57□□□□□ -2
SLC6A12P48065 AC007938.3-201ENST00000604965 623 ntBASIC2.57□□□□□ -2
SLC6A12P48065 Z82243.1-201ENST00000609432 473 ntBASIC2.57□□□□□ -2
SLC6A12P48065 AC104985.2-201ENST00000620598 500 ntBASIC2.57□□□□□ -2
SLC6A12P48065 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.57□□□□□ -2
SLC6A12P48065 AC022418.1-201ENST00000624118 445 ntBASIC2.57□□□□□ -2
SLC6A12P48065 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.57□□□□□ -2
SLC6A12P48065 MTND4P12-201ENST00000498999 1377 ntBASIC2.57□□□□□ -2
SLC6A12P48065 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SLC6A12P48065 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SLC6A12P48065 Y_RNA.100-201ENST00000363141 102 ntBASIC2.56□□□□□ -2
SLC6A12P48065 Y_RNA.373-201ENST00000365600 103 ntBASIC2.56□□□□□ -2
SLC6A12P48065 RNU6-658P-201ENST00000384606 106 ntBASIC2.56□□□□□ -2
SLC6A12P48065 RNA5SP219-201ENST00000390940 113 ntBASIC2.56□□□□□ -2
SLC6A12P48065 RNU2-3P-201ENST00000410144 191 ntBASIC2.56□□□□□ -2
SLC6A12P48065 CYCSP33-201ENST00000414485 327 ntBASIC2.56□□□□□ -2
SLC6A12P48065 RPL21P90-201ENST00000415692 466 ntBASIC2.56□□□□□ -2
SLC6A12P48065 ARL5AP1-201ENST00000418991 388 ntBASIC2.56□□□□□ -2
SLC6A12P48065 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.56□□□□□ -2
SLC6A12P48065 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.56□□□□□ -2
SLC6A12P48065 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.56□□□□□ -2
SLC6A12P48065 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.56□□□□□ -2
SLC6A12P48065 HMGN2P10-201ENST00000448085 265 ntBASIC2.56□□□□□ -2
SLC6A12P48065 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.56□□□□□ -2
SLC6A12P48065 RNU7-167P-201ENST00000459160 62 ntBASIC2.56□□□□□ -2
SLC6A12P48065 RNU6-329P-201ENST00000459618 107 ntBASIC2.56□□□□□ -2
SLC6A12P48065 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.56□□□□□ -2
SLC6A12P48065 AC117503.1-201ENST00000472241 394 ntBASIC2.56□□□□□ -2
SLC6A12P48065 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.56□□□□□ -2
SLC6A12P48065 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.56□□□□□ -2
SLC6A12P48065 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.56□□□□□ -2
SLC6A12P48065 MTND3P25-201ENST00000509243 135 ntBASIC2.56□□□□□ -2
SLC6A12P48065 AC104136.1-201ENST00000512969 394 ntBASIC2.56□□□□□ -2
SLC6A12P48065 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.56□□□□□ -2
SLC6A12P48065 RNU1-86P-201ENST00000516108 154 ntBASIC2.56□□□□□ -2
SLC6A12P48065 RNU6-189P-201ENST00000516120 101 ntBASIC2.56□□□□□ -2
SLC6A12P48065 RNU1-107P-201ENST00000516617 154 ntBASIC2.56□□□□□ -2
SLC6A12P48065 RNU6-143P-201ENST00000516942 93 ntBASIC2.56□□□□□ -2
SLC6A12P48065 AC087241.2-201ENST00000535801 324 ntBASIC2.56□□□□□ -2
SLC6A12P48065 ELOCP31-201ENST00000540463 467 ntBASIC2.56□□□□□ -2
SLC6A12P48065 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.56□□□□□ -2
SLC6A12P48065 MTCO3P13-201ENST00000577757 781 ntBASIC2.56□□□□□ -2
SLC6A12P48065 MIR1273C-201ENST00000578669 77 ntBASIC2.56□□□□□ -2
SLC6A12P48065 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.56□□□□□ -2
SLC6A12P48065 AC138761.3-201ENST00000579993 334 ntBASIC2.56□□□□□ -2
SLC6A12P48065 LRRC37A5P-203ENST00000580181 585 ntBASIC2.56□□□□□ -2
SLC6A12P48065 MIR548AC-201ENST00000585049 88 ntBASIC2.56□□□□□ -2
SLC6A12P48065 MIR3942-201ENST00000585264 109 ntBASIC2.56□□□□□ -2
SLC6A12P48065 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.56□□□□□ -2
SLC6A12P48065 C8orf59P2-201ENST00000603441 271 ntBASIC2.56□□□□□ -2
SLC6A12P48065 ATP1B3P1-201ENST00000605365 821 ntBASIC2.56□□□□□ -2
SLC6A12P48065 AL357078.3-201ENST00000607528 618 ntBASIC2.56□□□□□ -2
SLC6A12P48065 FAM157A-202ENST00000615155 405 ntBASIC2.56□□□□□ -2
SLC6A12P48065 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.56□□□□□ -2
SLC6A12P48065 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms